Difference between revisions of "Os07g0283600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0283600| Description = Peptidase C48, SUMO/Sentrin/Ubl1 family protein| Version = NM_001188214.1 GI:297725558 GeneID:9269239| Length = 6421...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os07g0283600|
 
−
Description = Peptidase C48, SUMO/Sentrin/Ubl1 family protein|
 
−
Version = NM_001188214.1 GI:297725558 GeneID:9269239|
 
−
Length = 6421 bp|
 
−
Definition = Oryza sativa Japonica Group Os07g0283600, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
+
Please input expression information here.
−
AP = Chromosome 7:10873223..10879643|
+
 
−
CDS = 10873223..10873417,10873498..10873579,10874235..10874336,10874456..10874553,10874692..10874778<br>,10874869..10875317,10875414..10875744,10875766..10875884,10875935..10876124<br>,10876319..10876657,10876735..10876875,10876958..10877440,10877703..10877901<br>,10879447..10879643|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008400:10873223..10879643
+
 
−
source=RiceChromosome07
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008400:10873223..10879643
+
 
−
source=RiceChromosome07
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atgacagcaagaacttgtgcagctggggaaatgaacaatgttgtcacggcggttgtcatggaaaacaaccagagaagagcttctatctccgagctggcctacaaccgacgcggcagcggaaaggctcctcacgatggtggaggagatagagcggtggtggaggaggcggaacagcggcgaacggactcctcgcagcgagccgtaatggctacatcttcaaataattcagattttgtccatgttgagggaaagggtgtgcggtgctcaccaaggttgaataagttcaagcaatctgatattggactgttgaagaagacatgttcatcactgccgaagaagtcatgtgcatcgaccagtggaaacaagaaaaggaagagagcggaaaatggaaaagagggttgcagtttccccaaggacatgacattgtggcttttgaaccatgtcaatactgagcttggtaccttggagttcgatggattatcaatccccataagaccactcattaagaaggtgattggaattcctgaaggacatatgcgtttgaagttgacagaagatactgaccataggttgaaggagaagttcatagaaggtggcagaggccaatctttaaataaagccatttctcggatgttactggaacataatgaggatgaatttattgtgtccttcatgatggttgctttgggtgtctatcttgtcccaggtagcaacttgacagttcatagggaatatctaacagctattagtgatgtgaagaacatcaagaacctgaattgttgcaaccatgttgctgattatcttttcgaggccatccatgatttcagaataaacacaagcataaatctaaatgtccgaggttgtgttcatatacttaatgttatcttcctggattttgttgcaggtatcaatgttccacaaggcacaccgcgcatagcgcatataaccactgcccatatagatgaagtaaaaactattgctaccagcagatccaagcatgctgactatgattctatccagataaaagatatagaatccactgtttatcgcgatggagaatctccactgcacgaatctccacagcacatgctctccattggatatagacaggatgtggaggaaggagtacatgatgatgctacttgcgttgatgaaggacaacacacacctgatccccagggacatatcgctgctggtgttgacgaagaacatatgaacataggacaacatacgccagacccccagggagctcctgctgctgctggtgacgaagaacaaatgaatatgcaagatggccaagttggtcaagacccaaaatcaacagggtgtgatgcaaatccaaataatgcatgtgatgagccacctgtaatcagcgagttgttaatgaagatgaaagagaaactcaaaattaggcgcactgaaatcatctccacatgcatggaacagcttgaatttatattggacaaatcagacaacgacatactttctgagtttagcacaaaattaaagaagttggcaagggtgaaaggcatggcaagtacttctgaagcatacagagctgaaactagaagcaattacaaggctgaggaaattgggcggcacagtggcaatgtagatgcaactgattttgcagaagtcattgcaattggggctgttgctgctcatgagaatgtgagggataacaatatggatggcaaagttcacccaccggctgctcataaaggtgctatggatgagggggctcaaacagaggaagacgatggcaaacaagatgaagacgatgaagacaaaggtgatgaaaaagtggaggacagtgttgatgatgagtatggtgaagatggtgcgggtggaagtcacagtgcgggttcccaaggtggtgctgatgagaacaatgacactgacgacagcagcggtgattcaaaacaaggacaacaaccaattccaagcgaagagcaatacccaggagcttccatgatggattctgtgacggatgatacctcacttggcacaccagtctatcatgatgttgttgtaattgaggattcatcacaggagtctctacgcgccaacactatggtccctgaactgactgaaccaattgcaagcggtgagcgattcccagatggtggttctgtgcctccaataaacaagcagagagctaaaaggtgcaagacaaaccatcaaagtgtagaagccatagcaacacttaggaaagggattcatttggatcattttgtcaacgatacctatgagaagcatgttgtagacaattttgatggtgatggtggtgcaactaaggtcaatagagcttggatcacagaacaagatttccgctccacacttaggagaaaaggtgaagtcagcaacaatttcatgtggctgtgttgctctgcaataatgaaagattgggattcaaaatcaaaagtaattttggaccttgccacagtggatcagctggtatcacccctggaaaaatgttgtgatgccaaggttaggcgcacattttcaaagattgatttgaaactaattgagcggttgtatttaccagtcctaaaggaacatcactggttccttatcgccatcaacttgcgcagccgcattgtgcagatatacgactcaatccggaatcaaaacaacctccaagttgctcttgacacgggaacgaatagtagcccatttggatttggtgacttatccacagtcgagtaccctgaaaccccttaccaagtagaactatatgccaccctgatacagtgtctgatgcctatcagtgtttggcagcaacccaggtaccaggcctgtaaccccaagtaccaggcaccagtatcagccctcacaaatactggtaccagtgtctggtgcctgacagcaacccaggtaccaggtaccaagtctgttacctggcagtacatggtactaggtaccagacatccaggtatcaggtctaaacccaggtaccaggactggtacctggcagtccctactgggtaccggacctggtacctcacataa</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MTARTCAAGEMNNVVTAVVMENNQRRASISELAYNRRGSGKAPH                    DGGGDRAVVEEAEQRRTDSSQRAVMATSSNNSDFVHVEGKGVRCSPRLNKFKQSDIGL                    LKKTCSSLPKKSCASTSGNKKRKRAENGKEGCSFPKDMTLWLLNHVNTELGTLEFDGL                    SIPIRPLIKKVIGIPEGHMRLKLTEDTDHRLKEKFIEGGRGQSLNKAISRMLLEHNED                    EFIVSFMMVALGVYLVPGSNLTVHREYLTAISDVKNIKNLNCCNHVADYLFEAIHDFR                    INTSINLNVRGCVHILNVIFLDFVAGINVPQGTPRIAHITTAHIDEVKTIATSRSKHA                    DYDSIQIKDIESTVYRDGESPLHESPQHMLSIGYRQDVEEGVHDDATCVDEGQHTPDP                    QGHIAAGVDEEHMNIGQHTPDPQGAPAAAGDEEQMNMQDGQVGQDPKSTGCDANPNNA                    CDEPPVISELLMKMKEKLKIRRTEIISTCMEQLEFILDKSDNDILSEFSTKLKKLARV                    KGMASTSEAYRAETRSNYKAEEIGRHSGNVDATDFAEVIAIGAVAAHENVRDNNMDGK                    VHPPAAHKGAMDEGAQTEEDDGKQDEDDEDKGDEKVEDSVDDEYGEDGAGGSHSAGSQ                    GGADENNDTDDSSGDSKQGQQPIPSEEQYPGASMMDSVTDDTSLGTPVYHDVVVIEDS                    SQESLRANTMVPELTEPIASGERFPDGGSVPPINKQRAKRCKTNHQSVEAIATLRKGI                    HLDHFVNDTYEKHVVDNFDGDGGATKVNRAWITEQDFRSTLRRKGEVSNNFMWLCCSA                    IMKDWDSKSKVILDLATVDQLVSPLEKCCDAKVRRTFSKIDLKLIERLYLPVLKEHHW                    FLIAINLRSRIVQIYDSIRNQNNLQVALDTGTNSSPFGFGDLSTVEYPETPYQVELYA                    TLIQCLMPISVWQQPRYQACNPKYQAPVSALTNTGTSVWCLTATQVPGTKSVTWQYMV                    LGTRHPGIRSKPRYQDWYLAVPTGYRTWYLT</aaseq>|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]
−
DNA = <dnaseqindica>6227..6421#6065..6146#5308..5409#5091..5188#4866..4952#4327..4775#3900..4230#3760..3878#3520..3709#2987..3325#2769..2909#2204..2686#1743..1941#1..197#atgacagcaagaacttgtgcagctggggaaatgaacaatgttgtcacggcggttgtcatggaaaacaaccagagaagagcttctatctccgagctggcctacaaccgacgcggcagcggaaaggctcctcacgatggtggaggagatagagcggtggtggaggaggcggaacagcggcgaacggactcctcgcagcggtagacgaggcggagcggcggaggaggcagaatggcgatggaagagatgaagcagcggcggacggactccttgctgcggtggaggaggcagagtggcaacggcggcggtggaggaggaggagggcaacagtggagaaggcagagcaacgagcggcggacgagctccttgcacgatagaggagcgcggagcggcagtgaagtaggtggagcagcggcggagcacgccggactggagagagagagagagaggaaggagagaggagaggctgactagtgaagcatgcaacgtgagcaaaagtgataaatagttaagaaggcatctcttaagagagaaaaaaaatatgtgcaaacttataaggggcatttggataaatgccaaatgtaatagtgaaaaatagttaaatttctcccgtactacttttttgtttggtacggtgaaagcatcaataccgcgaaaatctagatatgttccttgtcagccgttggattgtgcctggagggtaaagattgtcgtcaaggatacacaacccaaccacacatctaaaatgccgccttttcaaatacacgcctaccagctgtaacatttgcaaacgcacccttcttctagcagaaaaactactgaacggtgtcccgtggcggttccgttgtcacgggagaaattaatgtgcccaaaccgttaccctctcaccccatctgatcccctttcccttttccccaccctctccacactgcattcctctctcgctccgctcggcgctcgccgcgcgccgtcttcctccgctccccttcgctggcgcccttgcgctccggccaacttctccgcgcgtccccacatcggcgttgctgcaccagcggtgatatcgtgcacgcagcgataccccgcgccggcgctctcccaccatcggtatatgcgtttttctctcctttctcactcccagtttctctgattgaagattacctcgcgcaaaagtacaatgtcttatcaggatattctcaatttataacttccaaatcactccctaattaggcgtcaattttttttttgcattttctgttctagggtttgtaggtagggggtggcaggaagtgtatgggattcgtgttgatttcctgagggtcagtgaaaatcaataggttggttacttttctaatgaaggtgatttttatcaatagtttttagtggccgcgcgtttgtatgtgtggatgatgcatgtttatatttctcagaaattttttttctagggtgattcccatggggcattacttcatttttactaggtatcgagtaatacattttttttgtttttgtagggctgcaatctaatgctagagttttagatttttcctgtcccgtggtttgttcgcgtgattcctgagggatgttactaggtatcaagcaatacatgtgttttataggggctgcaattttactgcattattagcgtaaatgatgtacggtagtagtttcgtcccctgattttttcacaaggtatcaacaatgtttgaaaagcggactaactgctatgttttcccttttttttgtagagccgtaatggctacatcttcaaataattcagattttgtccatgttgagggaaagggtgtgcggtgctcaccaaggttgaataagttcaagcaatctgatattggactgttgaagaagacatgttcatcactgccgaagaagtcatgtgcatcgaccagtggaaacaagaaaaggaagagagcggaaaatggaaaagaggtatcgtgcttcattttgccataattctgtttaagtttctttttcatgttcatcttttcattgttttatactagttccctttaagtttttttaaaaagagattaaatgaaatttttcttatgttttggtacaatatttttaggtgcagatcattaaattgaggtgcaacccaagcaacatgagcacgatagcagctcaactgtcaccagattagatccgctatgtgcacaacatcaattttgaggaactattgttgatacagggttgcagtttccccaaggacatgacattgtggcttttgaaccatgtcaatactgagcttggtaccttggagttcgatggattatcaatccccataagaccactcattaagaaggtgattggaattcctgaaggacatatgcgtttgaagttgacagaagatactgaccataggttgaaggagaagttcatagaaggtggcagaggccaatctttaaataaagccatttctcggatgttactggaacataatgaggatgaatttattgtgtccttcatgatggttgctttgggtgtctatcttgtcccaggtagcaacttgacagttcatagggaatatctaacagctattagtgatgtgaagaacatcaagaacctgaattgttgcaaccatgttgctgattatcttttcgaggccatccatgatttcagaataaacacaagcataaatctaaatgtccgaggttgtgttcatatacttaatgttagttttccccttctgattttttttgggtatcatgttcctgtcatttttttaaatgcttgaatccattttttttctgcaggttatcttcctggattttgttgcaggtatcaatgttccacaaggcacaccgcgcatagcgcatataaccactgcccatatagatgaagtaaaaactattgctaccagcagatccaagcatgctgactatgattctatccaggtataaggctctcaatgatacctccttttttttgtatcatgtaggtagactagcaatttatatatcattttttttagataaaagatatagaatccactgtttatcgcgatggagaatctccactgcacgaatctccacagcacatgctctccattggatatagacaggatgtggaggaaggagtacatgatgatgctacttgcgttgatgaaggacaacacacacctgatccccagggacatatcgctgctggtgttgacgaagaacatatgaacataggacaacatacgccagacccccagggagctcctgctgctgctggtgacgaagaacaaatgaatatgcaagatggccaagttggtcaagacccaaaatcaacagggtgtgatgcaaatccaaataatgcatgtgatgaggtaaacccaacaatacattatgataggcaactatagcaataccttgttattttgccaggcaccagacatggtacctgtattttgccaggtatcagactttggtacctgggttattgccaggcactcatcactttttattatagctgatttttcatgtagatatttttttaaaaaaaatactgtgtttttcacagccacctgtaatcagcgagttgttaatgaagatgaaagagaaactcaaaattaggcgcactgaaatcatctccacatgcatggaacagcttgaatttatattggacaaatcagacaacgacatactttctgagtttagcacaaaattaaagaagttggcaagggtgaaaggcatggcaagtacttctgaaggtgatgccgctgtacttggcactcccaactttaaccatggtcctgacaagcatacagagctgaaactagaagcaattacaaggctgaggaaattgggcggcacagtggcaatgtagatgcaactgattttgcagaagtcattgcaattggggctgttgctgctcatgaggtatctcaatttgatgttcagaatgtgagggataacaatatggatggcaaagttcacccaccggctgctcataaaggtgctatggatgagggggctcaaacagaggaagacgatggcaaacaagatgaagacgatgaagacaaaggtgatgaaaaagtggaggacagtgttgatgatgagtatggtgaagatggtgcgggtggaagtcacagtgcgggttcccaaggtggtgctgatgagaacaatgacactgacgacagcagcggtgattcaaaacaaggacaacaaccaattccaagcgaagagcaatacccaggagcttccatgatggattctgtgacggatgatacctgtaagtatctttgtttttatctatatatttatttatttattttcatgcagatcactgccatatatatttagagagtttttgtttttttctttgcagcacttggcacaccagtctatcatgatgttgttgtaattgaggattcatcacaggagtctctacgcgccaacactatggtccctgaactgactgaaccaattgcaagcggtgagcgattcccagatggtggttctgtgcctccaataaacaagcagagagctaaaaggtgcaagacaaaccatcaaagtgtagaagccatagcaacacttaggaaagggattcatttggatcattttgtcaacgatacctatgagaagcatgttgtagacaattttgatggtgatggtggtgcaactaaggtcaatagagcttggatcacagaacaagatttccgctccacacttaggagaaaaggtgaagtcagcaacaatttcatgtggctgtgttgctctgcaataatgaaagattgggattcaaaatcaaaagtaattttggaccttgccacagtggtaaatttttttaataatcagttttttgttttgttttttttccaactgttttttaataatgaaagttgagtttttttttcaaaatgacaggatcagctggtatcacccctggaaaaatgttgtgatgccaaggttaggcgcacattttcaaagattgatttgaaactaattgagcgggtacttctcatccctcatccatcccccttccacacttgactgttttttttaatgatttctgcgagaaaataggcaaatgtgcgcactagcttatgatatttcttttttctcatctatctttttttcatgttttttcagttgtatttaccagtcctaaaggaacatcactggttccttatcgccatcaacttgcgcagccgcattgtgcagatatacgactcaatccggaatcaaaagtatagcaaaagttaacactcagatgtgtgggacaatgttttaagttcgcaaatactatacatttcttactgattttaactaggcatcacattttttcctattttttcttacagtgtagcaacctccaagttgctcttgacacgggaacgaatagtagcccatttggatttggtgacttatccacagtcgagtaccctgaaaccccttaccaagtagaactgtaagtatcaacaattttgttctatttaactaacttacaccatagtttttcctgtacacatttataagttttacattttttttattttctctacctagtcatgattgcgggttctgcgttctgagaatgctcgagtgtcacaatggccggagtcttgttggatacacttctgtaagtggtcttggtacctaaatccatttttttttctgtttttgggtttttttattcatacagagataaacctcattggattctcatattgtttccttttttcctcagaaaggcattccaacctatcgcaagcagctatgtcacaggttgatatagcatcgcttcaatgacctacatccacatcgtgcaaaatgagcgatggttgctttttaactatgtaaagtccactatagttaactatgtagtaccagcgttgtcaaaagcacgtatttgacgcttttgttcactgcacctaggggggcgaccatgtggtgatagctttttttgtgtttttgttttttaacagtaatgtgaaaaatcttcatgatgtaatgacagcagctgtcgcagttataaaatcatgcacttttatgtgttcatttcaaagatacttggtttgtgtggatgcaatgttctgtgacacatttttttttactccacatagatatgccaccctgatacagtgtctgatgcctatcagtgtttggcagcaacccaggtaccaggcctgtaaccccaagtaccaggtaccaggtaccaagtctagtacctggcagtaactggtactaggtaccagacttgtcctaggtatcatgtctaaacccaggcaccagtatcagccctcacaaatactggtaccagtgtctggtgcctgacagcaacccaggtaccaggtaccaagtctgttacctggcagtacatggtactaggtaccagacatccaggtatcaggtctaaacccaggtaccaggactggtacctggcagtccctactgggtaccggacctggtacctcacataa</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001188214.1 RefSeq:Os07g0283600]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 7]]
 
−
[[Category:Chromosome 7]]
 

Latest revision as of 14:10, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information