Difference between revisions of "Os07g0602200"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]
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GeneName = Os07g0602200|
 
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Description = Similar to HDA1|
 
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Version = NM_001066740.1 GI:115473212 GeneID:4343829|
 
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Length = 6319 bp|
 
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Definition = Oryza sativa Japonica Group Os07g0602200, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
 
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AP = Chromosome 7:25252192..25258510|
 
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CDS = 25252259..25252419,25252966..25253167,25253266..25253412,25253569..25253681,25254317..25254528<br>,25254931..25254995,25255318..25255488,25255575..25255664,25256280..25256624<br>,25256717..25256910,25257029..25257185,25257683..25257747,25257903..25258068<br>|
 
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GCID = <gbrowseImage1>
 
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name=NC_008400:25252192..25258510
 
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source=RiceChromosome07
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008400:25252192..25258510
 
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source=RiceChromosome07
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggcggcggcgacgaccgccgcggcggcggcgagggtggggctgctgtacgacgagaggatgtgcgcgcacgcgacgcccgacggggaggagcacccggagaaccccgagaggctgcgggccatctggcgcaagctctccgccgacggcgtcgcctccaggtgcatgatcatgaaagcgaaggaagctgaggacaagtatatagcttctgtccatagccagaaccatatcaagctgatgaggagtatcagctcaaaagaatatgattcccgtcgaaacaagattgctagaaaatttaattccatttacttcaacaagggctcctcagagtctgcttttcttgcagctggttctgtgattgaggtagctgagaaggttgctgcaggagagttaagttctgctattgctctagtccgacctccaggtcaccatgctgaacataatgaggcaatgggtttttgcctcttcaacaatgtagcaattgctgctgattatctcttaaatgagaggactgacttaggtatcaagaagatattgattgtcgattgggatgttcatcatggaaatggcacacaaaagatgttttatagtgatcctcgtgtattgttcttttcagttcacagatttgattatggcagcttctatcctgctgaaggggatgcatcttactgtttcattggggaaggagatggtaaagggtacaacattaacgtgccctgggaacatggaaaatgtggtgatgcagattatattgctgcatgggaccatgtactacttcctgttgctgaagcatttaaccctgatatagtcttggtgtctgctgggtttgatgcagcactgggtgatcctcttggtggctgctgcatcactcccaatggatatgctctgctactgacaaagctcttaggttttgcccaagggaggatagtgatggctcttgaaggaggctataaccttagatccatagcaaattcagttagtgcttgtgctaaagttttgttgggagacaagttcagatttgacactcctgatatgcaaccgtttgaatcttcatggagagttatacaagcggtacgtgatgaattgaagacgttctggcctgttctgagtaatagattgccagagaatatatcattgaggagtaggccctcacaaattgagctgtattcttctggttctgactctgaagttgaagatctccctgatgctattgcttctgtcaatattattcaaattacttatggtattataagtgaaagcctctcaaagttgaaccttgatgaagacaaaatcgcaacaaagaccacctcaagtaatgtaatggttgaaggtccaactgattcagttgaaccacaaaatgatggatctgctgcggtgtcaactgaaggaatatcatctctatcttctacttggagatcagaactgtcaaaagtatatgtttggtatgccagctttggttcaaacatgtggacaccaaggtttctgtgctacatccaagggggaaaggctgagggtatgaatataccatgttttggatctcatgacacaagcccaccaagaggttccatgtggaagactgtgcctcatagattgttttttggtagatcctctactccttgctggggaactggtggtgttgcttttctcaaccctgagataaaccacactgagaactcctatgtctgcatgtataaaataacgctcgagcagttcaatgatgtattgtttcaagagaatcgtttagtgaaggagaacggcgaaagtggaaaaactgagtctcctgactctcctttgattggcttgtctgaaatagagtttgtttccagaaacaagggtgtccaccttgcacctattaaggatagctggtactccaatgtactttaccttggggaggaggataaccttccaattcttacaatgacatgcccgtcatcagacgtagagcgatgcagatccggagagctgccattgtgtcctccatccaagacctactccgccaccctgataaggggactaatggaagggaagcacctggatgcagatgcggccgctagttacatcaacactgcagctaccagaggcctgtga</cdnaseq>|
 
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AA = <aaseq>MAAATTAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWR                    KLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSI                    YFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVA                    IAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAE                    GDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGF                    DAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLL                    GDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPVLSNRLPENISLRSRPSQIELYSSG                    SDSEVEDLPDAIASVNIIQITYGIISESLSKLNLDEDKIATKTTSSNVMVEGPTDSVE                    PQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNI                    PCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKI                    TLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYS                    NVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADA                    AASYINTAATRGL</aaseq>|
 
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DNA = <dnaseqindica>68..228#775..976#1075..1221#1378..1490#2126..2337#2740..2804#3127..3297#3384..3473#4089..4433#4526..4719#4838..4994#5492..5556#5712..5877#tccatttccgaatcgtcgtctcgcctccacttccgacttccgagtcgtctcgcctcgccggcgcaggatggcggcggcgacgaccgccgcggcggcggcgagggtggggctgctgtacgacgagaggatgtgcgcgcacgcgacgcccgacggggaggagcacccggagaaccccgagaggctgcgggccatctggcgcaagctctccgccgacggcgtcgcctccaggtatacgtatacccccaccccccgccgctcgcggcgtttttcttttttgtccttaaggacttgggagagtcggatcggagtagcgtgattttgctgggatcggcgacgcgcgcggcggcttcgatgctctcatggttcggccgaattgttgtggtaggggagccgcggcatgcctgtagccatttccgttcagttctagcacggaacctagggttcgcgcaaattttgtctcgagacggtatgtgttggtgaatggtgactctaattgtgtacttaggtaaaaacatcccaaatgctagaagtacccgagaaaatcagggggggagatgtattggtacaggctgtggcttgaactacagtactgaagcaatcgtagcaaacttgtgtgatttacgctgcacagcaactttgatgatacttcttggttaagcttaaacattagcataacaacttaggtcacttaactttgctcattgctttgactggcttataattttgctgctggcaaagcttccttggatgtaatgtagcatagttttctcccaggtgcatgatcatgaaagcgaaggaagctgaggacaagtatatagcttctgtccatagccagaaccatatcaagctgatgaggagtatcagctcaaaagaatatgattcccgtcgaaacaagattgctagaaaatttaattccatttacttcaacaagggctcctcagagtctgcttttcttgcagctggttctgtgattgaggtgattcaacatttgacatgaacatttattgtgtagttgattgctctttccttgtgctgattgctctgcaaaaaataatcaactcatttggcaaataggtagctgagaaggttgctgcaggagagttaagttctgctattgctctagtccgacctccaggtcaccatgctgaacataatgaggcaatgggtttttgcctcttcaacaatgtagcaattgctgctgattatctcttaaatgagagggtatgttgttgaaacttgcctatttttttagtaccaaaatctgctctccttttttttttcccttcgtcatttcctatataggaacaggaatgtttttatcagatgcagttgaatgagaaggtgaactcatgttcctatttgccttttttgttgcagactgacttaggtatcaagaagatattgattgtcgattgggatgttcatcatggaaatggcacacaaaagatgttttatagtgatcctcgtgtattgttcttttcagttcacaggtatgacagcctcttgacatggactttatagttttttttgggtctttttagtagcatcattactttcatgacatgatactatgatagtactaagtaaagtcatggcagttttgttgccttcattctggaggtttaccgcactttgaatggttgtactactttgccaaacatatcttttcccctatggaagcattgaatgcttctaattaatatagaaatttaagggcactctctgttatttccatggtcctaacaaacccgtttataatggacagatagtaaatgtattatttttcctttaatgaataggattgaatcccgcattccaccaatccacactgattatcgtacattattgctcttcgaatgaaaagaaaatggcatcacccaaataatatctgttgctggatgacatggtgcacattgaataatttaggcagcattacagaaatgtaaatgcttaagtcgagttttccccaaggaatcttttagagcagttgtaaacattaattgttttgctttggtcctatggcaaagctagagatgtactggttcagaagcataatcaattgtatgtctgatgagaacctattcattttagtgtatgatgcttgtgtcctatgtttcttttgtagatttgattatggcagcttctatcctgctgaaggggatgcatcttactgtttcattggggaaggagatggtaaagggtacaacattaacgtgccctgggaacatggaaaatgtggtgatgcagattatattgctgcatgggaccatgtactacttcctgttgctgaagcatttaaccctgatatagtcttggtgtctgctgggtttgatgcaggtatatagtttaaaagttcgtagaactcttttgtgccagcaacatactaactttaaaaagaaacttataaaataaaaatgcagccttttgtcttgaatgaaactgtttatatagtgttaatttatagcttctcaattttatctctatgagctagttgaccgctgcttgtgctagtagcatagtgcagcttgcaacctattatatctgatttcgttgtggaatgataaatgagatctttgctgcagaaatattgaaaaaaaaatctctaagagtttgttttataagactgttactacatgataacagagcctaaacttctggtatatctaatacagtactagatcatatatgtgccgttgttcgctagttctgattttttctctacactgatattttgggtagcactgggtgatcctcttggtggctgctgcatcactcccaatggatatgctctgctactgacaaaggtaagcacttgcagaaaaataacattcagttaggctttcaccacgccatgcattttcctgtctctaaaggaataacattcagatcagctgggttaggttaataatatcgaagttttccaacacagcaaccagaaactttttatgtaactttttccttagtaatttcttattggtattctctgctgttagctgttaggatattttcatttgatctcttccagttacttcatatctctttatgtctactgggctgtgctaaaattattattattattattttttaaaaaatagtaatatttaattctgtatgtaaaacctgcagctcttaggttttgcccaagggaggatagtgatggctcttgaaggaggctataaccttagatccatagcaaattcagttagtgcttgtgctaaagttttgttgggagacaagttcagatttgacactcctgatatgcaaccgtttgaatcttcatggagagttatacaagcggtaatggtctgcttacattaattgctgtctgattccttactgtggatatctgtaattatgtttccttcccccacaccactgaccaggtacgtgatgaattgaagacgttctggcctgttctgagtaatagattgccagagaatatatcattgaggagtaggccctcacaaattgaggtagatacttatttttcttatcttaaagacttttaacttgggatattcttggtctaatcccagattaatttgctctgacataagatgcaccatcgcttaaccctggatttacttgtgtttgccaggagtttggcacccttttcttagcacttaatttatatagacatgtaataacaatagttgcaggttgcactgtgtattcatgatgacttctgctacaaaaacaattgtactgtagcttaactccaaagaaaaatacatgctgggctgtatcaactctgttatgcatttcaattgataggctacttgcttacagcctgtactttgatgaactgtttaaaaatgcttaaaaaatacatcatgcatagacccatatcctggagatgcttcatgcctctcaactcttacaaagcacagttacactggtcgactttatcaacatcatgcatcttaatttgtattgagttaatgatcttggttttgattcattaacatatttggcctgctgcatggtggcttaatgtatagctaagacaaaattgtagggaaatatcaacattgtgttgcccttgactaattcacctttttgtttccccccacttttggtatgatcagctgtattcttctggttctgactctgaagttgaagatctccctgatgctattgcttctgtcaatattattcaaattacttatggtattataagtgaaagcctctcaaagttgaaccttgatgaagacaaaatcgcaacaaagaccacctcaagtaatgtaatggttgaaggtccaactgattcagttgaaccacaaaatgatggatctgctgcggtgtcaactgaaggaatatcatctctatcttctacttggagatcagaactgtcaaaagtatatgtttggtatgccagctttggttcaaacatgtggacaccaaggtttctgtgctacatccaagggggaaaggtaaagtgaaaacgtattctcctagttttcctatttttgataagcagcatgctctgcatgatggatttgctatttattttaatgttggacaggctgagggtatgaatataccatgttttggatctcatgacacaagcccaccaagaggttccatgtggaagactgtgcctcatagattgttttttggtagatcctctactccttgctggggaactggtggtgttgcttttctcaaccctgagataaaccacactgagaactcctatgtctgcatgtataaaataacgtatgtatgttgtagcatctgcctacctgttatcaatctttgagttaggcactgtgggggtatgatcttcagttaatcttctggatctcatcataatttgcctatcttttttgtacaggctcgagcagttcaatgatgtattgtttcaagagaatcgtttagtgaaggagaacggcgaaagtggaaaaactgagtctcctgactctcctttgattggcttgtctgaaatagagtttgtttccagaaacaagggtgtccaccttgcacctattaaggtttgatttaactgcaacaagcatgctcttgttcttgcaactatttaactttgaatgcatagccgccattacaaacatcattgttgggtgcttagacataagcagcatgctgataaaaggcctaccaaatgcgctcagttcaccatgaccgcatctgccacttgtgcccagatgacatttttatagaagttagtggtgtgccaactgttaatggtgagttggttatagcaaggaaatgccaattacctcttagtgctgtcagatttttctgggctttgaattgtttgtatttcccgggagctagtctagaccaagaaaattccgcagagtgtattttggacatcgtaagcagtagtgaaacaatcacttgataagcaagaatttctcactatgggcagtcatgggcatgacttggaactacagtatttcattccctatcatttgctttctgcattgaatgttttgcatatctgatagttgaattctattccctgcaggatagctggtactccaatgtactttaccttggggaggaggataaccttccaattcttacaatgacgtaagtgtctgtacctttaagttcctttttacgatatagattacttgcaactcaatgcaccatttgaatggcagttgaaatataccggtaagataagtctcacaatccaagcacttcgcttgtgtctaacacgaagtgtttctttctctctgcagatgcccgtcatcagacgtagagcgatgcagatccggagagctgccattgtgtcctccatccaagacctactccgccaccctgataaggggactaatggaagggaagcacctggatgcagatgcggccgctagttacatcaacactgcagctaccagaggcctgtgaaggctgcttccctatgcattatggtttgtagttttgcactaagcatgtaagtggctaacccacgaatccacttattttcacttataagtgggtttgcagattagccacttacgcgcttagtttgtacagccagtaggagcgtactaggactgtaggaggaatgatgagtaggtttgcaggactgtaaagatagtgcgttgatcattcaggaccacgggggcttatgtagaggcctcgtgaatgtcctgccaattggggaatctggacccgatcaagtttccctaggattgttaagaatctagctagcgcttgtaccctgggttggtcattgtctcattggtgctctccggattggtttgttttggggtggaaaaaaaaacactagtcgatgttgcctggtttttcatgctgttacctggcgaggaaatgacgatttcttgtg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066740.1 RefSeq:Os07g0602200]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 7]]
 
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[[Category:Chromosome 7]]
 

Latest revision as of 14:19, 14 May 2015

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Structured Information