Difference between revisions of "Os07g0693500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0693500| Description = Similar to AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase isoform L). Splice isoform Ex1A-3| Version = NM_001067265.1 GI...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os07g0693500|
 
−
Description = Similar to AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase isoform L). Splice isoform Ex1A-3|
 
−
Version = NM_001067265.1 GI:115474262 GeneID:4344386|
 
−
Length = 6691 bp|
 
−
Definition = Oryza sativa Japonica Group Os07g0693500, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
+
Please input expression information here.
−
AP = Chromosome 7:30165542..30172232|
+
 
−
CDS = 30165639..30165903,30166402..30166586,30167241..30167430,30167727..30167905,30168000..30168051<br>,30168163..30168290,30168657..30168836,30168946..30169013,30169101..30169243<br>,30169419..30169480,30169611..30169724,30169917..30170057,30170417..30170569<br>,30170710..30170763,30170839..30170949,30171076..30171249,30171337..30171417<br>,30171525..30171623,30171726..30171794|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008400:30165542..30172232
+
 
−
source=RiceChromosome07
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008400:30165542..30172232
+
 
−
source=RiceChromosome07
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggactccacctacgccctccacctcgccgtcgccaccctcctcggcgcctccttcgccgccgcctccgcctactatatgcaccgcaagaccctcgaccagctcctccgcttcgcccgctcccttgaccgcgaccaccgccgccgcaaccgccacctcctcgacgccgacgacgacgatgacgacgaccctcccagagaccacgatcgccgcaccacccttcccatcccaccgggccttccgccacttcacaccggccgagaaggaaagccaattatctcaccagcttccaccaaaagagttggacctttggttagacctactacaccaagatcccctgttcctactgtcagtgcatttgaaactattgaagattcagatgacgatgatgagaatattgccccagatgccaaaaacaatgccgtttccttgctcacaaatggaactattggatcagatccccttccgggtaaagcaagtcagaatggggacacaaaaccagtaccatcaacaaacatgattagatctcaaagtgcaacaggcagtctgcatggggcccagcacaatccagttgcagctgatattcttcgaaaggaacctgaacatgagactttcagtaggatcaatataacagctgttgagactccatctcctgatgaaattgaagcatacaaggttcttcagaaatgtcttgagctacgagagaagtacatgtttagagaagaagttgctccatgggagaaggaaatcataactgatcctagtactccaaaacctaatcctaaccctttctattacgagcagcagactaaaactgaacatcattttgaaatggttgatggtgttattcatgtataccccaataaagacgctaaagaaagaatctatcctgttgctgatgctactaccttttttactgatatgcactatatccttcgtgtgttggctgctggggatattcgaactgtatgttataaacgtttaaatcttctagaacagaaattcaatcttcatttgatggtcaatgccgatagagaactacttgctcagaaagctgcaccccatcgggacttctacaatgtcaggaaggttgatactcatgttcatcactctgcatgcatgaatcagaagcatctgttgagatttatcaagtccaagttgaggaaagaacctgacgaggttgtgatttttagagatggtacctatttgactcttaaggaggtttttgagagtttggacttgactggttatgacctcaatgttgatctcttagatgtgcatgccgataaaagtacattccatcgctttgacaagttcaatttgaagtataatccttgtggccaatcccggctgagggagatctttcttaaacaggacaaccttattcaaggccgatttcttgctgaattgacaaaagaagtattttctgatcttgaagcaagtaaatatcagatggctgagtatagaatatctatctatgggagaaagaaaagtgagtgggatcagatggcaagctggatagtgaataatgaattgtacagcgagaatgttgtttggttaattcagattcctcggatatacaatgtatacagggagatgggaacaatcaattctttccagaacctccttgacaatatttttctgcctctttttgaagtaactgttgatcctgcttcacatcctcagctccatgttttcttgcaacaggtcgttgggctggatttagtggatgatgaaagcaaaccagagagacgcccaacaaaacacatgcctacacctgagcaatggactaatgttttcaatccagcatatgcatattatgtgtactattgttatgctaacttgtacacgctgaacaagcttcgtgagtccaagggtatgacaacaatcaaacttcgtccacactgtggggaggctggagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggttaatttaaagaagtcccctgtcctccagtatctgtattacctagctcagattggtcttgccatgtctcctttgagcaacaactcattgtttattgattatcaccgaaaccctttcccaacatttttcctaagaggccttaacgtttctctatcaaccgatgaccctttgcaaattcacctgacaaaagaacctttggttgaagaatatagcatcgctgcttcgctgtggaagctaagttcatgcgacctatgtgaaattgctaggaattctgtgtaccagtctggtttctctcataggctcaagtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcaccagacaaatgttcctcacatcaggattgaattccgacacactatttggaaagaagaaatggagctaatacatctgaggaatgttgatataccggaagaaattgataggtga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MDSTYALHLAVATLLGASFAAASAYYMHRKTLDQLLRFARSLDR                    DHRRRNRHLLDADDDDDDDPPRDHDRRTTLPIPPGLPPLHTGREGKPIISPASTKRVG                    PLVRPTTPRSPVPTVSAFETIEDSDDDDENIAPDAKNNAVSLLTNGTIGSDPLPGKAS                    QNGDTKPVPSTNMIRSQSATGSLHGAQHNPVAADILRKEPEHETFSRINITAVETPSP                    DEIEAYKVLQKCLELREKYMFREEVAPWEKEIITDPSTPKPNPNPFYYEQQTKTEHHF                    EMVDGVIHVYPNKDAKERIYPVADATTFFTDMHYILRVLAAGDIRTVCYKRLNLLEQK                    FNLHLMVNADRELLAQKAAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPD                    EVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSR                    LREIFLKQDNLIQGRFLAELTKEVFSDLEASKYQMAEYRISIYGRKKSEWDQMASWIV                    NNELYSENVVWLIQIPRIYNVYREMGTINSFQNLLDNIFLPLFEVTVDPASHPQLHVF                    LQQVVGLDLVDDESKPERRPTKHMPTPEQWTNVFNPAYAYYVYYCYANLYTLNKLRES                    KGMTTIKLRPHCGEAGDIDHLAAAFLTSHNIAHGVNLKKSPVLQYLYYLAQIGLAMSP                    LSNNSLFIDYHRNPFPTFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASLWKLSSC                    DLCEIARNSVYQSGFSHRLKSHWIGRNYYKRGHDGNDIHQTNVPHIRIEFRHTIWKEE                    MELIHLRNVDIPEEIDR</aaseq>|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]
−
DNA = <dnaseqindica>98..362#861..1045#1700..1889#2186..2364#2459..2510#2622..2749#3116..3295#3405..3472#3560..3702#3878..3939#4070..4183#4376..4516#4876..5028#5169..5222#5298..5408#5535..5708#5796..5876#5984..6082#6185..6253#aagaggagaagagaagggaagagcccaagcaaaagcaaaagcccagaaagaaggaagggaaaccccacgcggaggcggagagcggagtggcggcgggatggactccacctacgccctccacctcgccgtcgccaccctcctcggcgcctccttcgccgccgcctccgcctactatatgcaccgcaagaccctcgaccagctcctccgcttcgcccgctcccttgaccgcgaccaccgccgccgcaaccgccacctcctcgacgccgacgacgacgatgacgacgaccctcccagagaccacgatcgccgcaccacccttcccatcccaccgggccttccgccacttcacaccggccgagaaggtacccccacccccacatttccttcctttttcactagtcatatactgttcccttgtgacttgtgatcggagcggcgcaacttactcatgcgtatcatctaaggattcattgtataatgtgcgcgaccatgtgattactagctcactagctcttcattcgcgtgtggaggggttcatccatcccctctgatttactacttcctaggtgtagattattatttttaaaatcatattcagggtttgtgcatctgggggatttttgacccccaaagaaacatccctcaaactgcacccaactatccgcatgtatatctgtcttcaatacttgtaatcatatctgcgtagtgaatctagtgatgcttttttttttcaatgaaacaaaacggattttaatcatggtgcactagtgagttgctttatgatcacacacctttgcactgattttctaatttgtaagtaattctgcatgatgctaatattgagcccttttacatatcaggaaagccaattatctcaccagcttccaccaaaagagttggacctttggttagacctactacaccaagatcccctgttcctactgtcagtgcatttgaaactattgaagattcagatgacgatgatgagaatattgccccagatgccaaaaacaatgccgtttccttgctcacaaatggaactattgtaagtcctaagatgcatatgcttattttgccaagctatagcactacttttatttttctgggtgaattgcatctcaatggcatgaataaaatatctggaaatttgtaatctacgttgttgttttaactaaatggaaatttggccctattcaatgcaatcctaggaggttagcctccttgtattttgacatgttagcttatctgattatgttgcaagaataatcaggtaaagattctcatgttaagtttcaaggcaatgtaaacagaataattcctatgcatatttttttgttgtattgcaattatcgtgcatattttgttgcgagaaaattaaagtcatcttgaactggccatgcaaatcgcaatgttcactgatgcacttattcacagatacaatttcctcgctatttttttattgtcccctgctccatgtatttctttgttacatttttgcctatggggctgtttgctttgatgcctaaatcaaccctaccaaatttgggcaatgtttgggttgttaccttgcctatttggtagggtttgttttggcaacaaagtgaacagccccatgatgttctttttcagtggtaactctctacatgcaaatgtatgttttcttgtatttaatgtactaagattattcttcttatctcagggatcagatccccttccgggtaaagcaagtcagaatggggacacaaaaccagtaccatcaacaaacatgattagatctcaaagtgcaacaggcagtctgcatggggcccagcacaatccagttgcagctgatattcttcgaaaggaacctgaacatgagactttcagtaggatcaatataacagctgttggtatggtccacttttcccgtgccttatattaaatcaattctattttaagtccaattaatattgtttttactactcaaactctagccatgaccctgaacatggtgttctcagaaaaaaaaaatgttcacaccattagaattgtcccttttggtatcagttagaaattagaatgcattttattttatggattatctacgtgatagcgatgatttatgttgctgaaaatgaaacctgctattactattattattcacttacgtgttgcaacacttgcacctgtttttttttggttgcagagactccatctcctgatgaaattgaagcatacaaggttcttcagaaatgtcttgagctacgagagaagtacatgtttagagaagaagttgctccatgggagaaggaaatcataactgatcctagtactccaaaacctaatcctaaccctttctattacgagcagcagactaaaactgaagtgagtgtgtttccctatattttctgcatattaacgatacaacacgttttcctgctctgctttctgtactctaattttgttttccttccttcagcatcattttgaaatggttgatggtgttattcatgtataccccaataaagacggtgagtaacaaattattctttctcttttagtttacgactactcatattttgtcgaagttttttcttttcatgttcgtcgtcacttatttttgtcttcctctgttgctgcagctaaagaaagaatctatcctgttgctgatgctactaccttttttactgatatgcactatatccttcgtgtgttggctgctggggatattcgaactgtatgttataaacgtttaaatcttctagaacaggtaattcttttaaagtggttctttcaatgcttgtatttgctgtatgtgtttgagcctagcaacaagatatgtgaaatcttgcaatggcagcaaaaggtggtacagtactccaggctacatgcaatgttaatatataatctcaagcatatagcatacaaaagaatccctgatgtggccaagatttttttgtgcatctaacatttgtaggctagtagtgtttgctggcatatattgaatgtgctccagactggactgtcaagttaacttgattcataaatctcactgaacacatcggaatgggccatggctaggtttcttttcaattatgtacatttactatcgttttcactcttgtggatttttcagaaattcaatcttcatttgatggtcaatgccgatagagaactacttgctcagaaagctgcaccccatcgggacttctacaatgtcaggaaggttgatactcatgttcatcactctgcatgcatgaatcagaagcatctgttgagatttatcaagtccaagttgaggaaagaacctgacgaggtgcacctattttcttttcatcaatccctgtggttttttttctcatgtggaatatgaaggttctttgtctgctctctacttaaaaatttcaaaaattgcatttgtgcaggttgtgatttttagagatggtacctatttgactcttaaggaggtttttgagagtttggacttgactgggtaactgaaattctttatgtgatggttctgtcatgtatcttttgattaagatattttttaactaacctgcttttgccactctgccagttatgacctcaatgttgatctcttagatgtgcatgccgataaaagtacattccatcgctttgacaagttcaatttgaagtataatccttgtggccaatcccggctgagggagatctttcttaaacaggacaaccttattcaaggtgcaccttttgttttgtcttgtttcctacgtatttcagtaatcgatgccattctcgttttgttatattttctttcagttgtcgagaactgttactcatgttctatgttgaccttattctcagcataccctgtatatgtacaattctttaaaatgttgtattgtcttcttaataggccgatttcttgctgaattgacaaaagaagtattttctgatcttgaagcaagtaaatatcaggtacttctttctttctttaccaatctcatatttgtgattctttaaggtggtgttgttcgctatttgtcatgtaacacattgtttacatattgctctgtctaattattcctactctcataatcttcaccagatggctgagtatagaatatctatctatgggagaaagaaaagtgagtgggatcagatggcaagctggatagtgaataatgaattgtacagcgagaatgttgtttggttaattcaggttatgacactctctgttgatgtcgtcgtctgcttctagtcataattttatctgagttttttttctaaacattcagtaatcaattcttaaactttgtaaaccaaacaaactagtatactctgtgcaggtaactattttatttttattttgccagagtagatttactgaaacattgtttaattttatctgcagattcctcggatatacaatgtatacagggagatgggaacaatcaattctttccagaacctccttgacaatatttttctgcctctttttgaagtaactgttgatcctgcttcacatcctcagctccatgttttcttgcaacaggtcagtggaactatttacgcagatgcgcactgcagtgctaatatagtactcaattgaatggagttaaaaaatgtattaattagaaaatatatgatatttgaacagtggtatgtgagtcttacaaagattgacctcttttagctgtcctatctagtggaaatagagggaataacattgataagttacaaggcttgctgcagcacctaaagcaatgctcagtaggatactttcctctaacataagggcacctctaatctcctcccattagtaactttatgcattactatgcctagtgtatgccttgttatgttgtggagcggagcagtcatcaccatcaattttgctgctgttttcttcaggtcgttgggctggatttagtggatgatgaaagcaaaccagagagacgcccaacaaaacacatgcctacacctgagcaatggactaatgttttcaatccagcatatgcatattatgtgtactattgttatgctaacttgtacacgctgaacaaggtatcattcatttgtccccagatctctgcctgttcttctccttcaaattctagttttcagattagcttctctctcaacatttatgatgtcctatcccctattggggctctcttggttgacttgagatttttgtgatgtagcttcgtgagtccaagggtatgacaacaatcaaacttcgtccacactgtggggaggtatatgctaatgcacatatttgagtattcatagatttaccccggaaaagttgcattgatgattcttgtcttcaggctggagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggttaatttaaagaagtcccctgtcctccagtatctgtattacctagctcaggtaactagtattttgtgttcattcctcatcatttttttagcgcaacagctatcaattgaacacctatcaattttgttttctcggatctttgaataaactaaccatcttttgtttgcctataattagattggtcttgccatgtctcctttgagcaacaactcattgtttattgattatcaccgaaaccctttcccaacatttttcctaagaggccttaacgtttctctatcaaccgatgaccctttgcaaattcacctgacaaaagaacctttggttgaagaatatagcatcgctgcttcggtaactatctccttcactctagctctttggatatgtttagattccacttagatctgcttaatttggattgcctgtcattcttggcagctgtggaagctaagttcatgcgacctatgtgaaattgctaggaattctgtgtaccagtctggtttctctcataggctcaaggtatagattgctattgttcatttagcaattttgattttgttttcatatttttctctctgcctattttttttctccttgttttgataagacattttgctcttgtatagtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcaccagacaaatgttcctcacatcaggattgaattccgacacactgtatgtacttcgtactagcttctctgcctggagtctgatctcttcccgtacttgtcagcacgtttgtttctgttggtaattgcgtttgttactggcccgcagatttggaaagaagaaatggagctaatacatctgaggaatgttgatataccggaagaaattgataggtgaagacctggcaagaattttgcaaaccctgaagttacttggttgttgatgatggtcctggaaggcaccccatcttcctaccataaactttccaggtacaaccaagaccgtgcggtttctacttgcttgcggaagggaggagaaagggatctaggatgattctacttttcgatgaatctccgtagcgtgttgcgttccctagtagtaggattttgataaaagaaattatgttaggactgaggccgtaccataaaataagaaagatttgagtcatggaatactggaagtttaaacatacgcatgcatcgggggtcatatagtccaaaataacaatggaaaattgataaaccccaactagccaagggtctagtgaggttgcacatgtgctgtaagctattactagtacacgcgtacatttatacatgtgatgccgttcgatac</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067265.1 RefSeq:Os07g0693500]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 7]]
 
−
[[Category:Chromosome 7]]
 

Latest revision as of 14:25, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information