Difference between revisions of "Os12g0230100"

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(Created page with "{{JaponicaGene| GeneName = Os12g0230100| Description = Similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment)| Version = N...")
 
 
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os12g0230100|
 
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Description = Similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment)|
 
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Version = NM_001072974.1 GI:115487909 GeneID:4351828|
 
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Length = 5749 bp|
 
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Definition = Oryza sativa Japonica Group Os12g0230100, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
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Please input expression information here.
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AP = Chromosome 12:7094912..7100660|
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CDS = 7095112..7096290,7096667..7096756,7096858..7096933,7097181..7097398,7097533..7097748<br>,7097953..7098138,7098212..7098334,7098430..7098545,7099285..7099840<br>|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008405:7094912..7100660
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source=RiceChromosome12
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008405:7094912..7100660
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source=RiceChromosome12
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggcaggcaccctgctccagccggttgccctcggaacaacttttgcaggccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttggcgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcatagcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagatcaagacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaagctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcggtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgctcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattgggaggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttggagctttcattggaagaagctcgtcagctaggacacaactatattggatctgagcacttgcttcttggactgctccgtgagggtgaaggtgtagcagcccgtgtgctcgaaagccttggagccgatcctagcaatattcgcacgcaggttatccgaatgattggcgagactacagaagctgttggtgcaggagttggaggagggagtagtggcaataaaatgccaacacttgaggagtacggaactaatttaacaaaattagcagaggagggaaagctagatcctgttgttggaaggcaaccccagattgagcgtgtcgtacaaattctgggcagacgaacaaagaacaacccatgcttaattggagagcctggtgttggaaagacagcaattgcagaaggccttgctcaacgcatttctactggtgatgtgcctgaaacaattgaaggaaagaaggtcattacccttgatatgggacttcttgttgctggtacaaaataccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgatgagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggtgctattgacgctgctaacattttaaagccagcattagcaagaggagaactacagtgtattggagccaccacacttgatgaatacaggaagcatattgagaaagacccagcattagaaagacgtttccagcctgtaagagtgccagagccaacagttgatgaaaccatagaaattctcagagggcttcgggaacgatatgagatccatcataaacttcgttacactgatgatgctctgatttcagctgccaagctatcttatcaatacatcagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgtaaggcttcgacatgcccaggttcctgaagaagctagagagcttgacaaggagctcaagcaaatcacaaaagataagaatgaagctgtccgtagccaggacttcgaaaaggctggagagttacgtgatcgtgaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaagcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacattgtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagcttcttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagccataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgcaagcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgacttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcgattacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaagcagtacttccgccccgagttcctcaaccgtctcgacgagatgatcgtcttcaggcaactcaccaagctggaggtcaaggagatcgccgagatcatgctcaaggaggtctttgacaggctcaaggccaaggacattgacctccaggtcaccgagaagttcaaggagcgtatcgttgacgaaggcttcaacccgagctatggtgcgaggccgctaaggagggccatcatgaggctcctggaggacagcctcgcggagaagatgctagctggggaggtgaaggagggtgattctgccattgtcgatgtggattccgaggggaaggtgattgtactgaatggccaaagtgggttgcctgagctttcaactccggctgtcactgtgtag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MAGTLLQPVALGTTFAGRVSGQRWKSHGTRRPPSMLAMSLSRPV                    KMAAFVGLRSVHSFSVTPVTNFRSTVASYRSRRGRRARFVTRSMFERFTEKAIKVIML                    AQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGF                    VAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADP                    SNIRTQVIRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP                    QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMG                    LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA                    LARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIH                    HKLRYTDDALISAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKE                    LKQITKDKNEAVRSQDFEKAGELRDREMELKAQITALIDKSKEMSKAETESGETGPLV                    NEADIQHIVSSWTGIPVEKVSSDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARV                    GLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI                    GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR                    TVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRPE                    FLNRLDEMIVFRQLTKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNP                    SYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGQSGLPELST                    PAVTV</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]
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DNA = <dnaseqindica>4371..5549#3905..3994#3728..3803#3263..3480#2913..3128#2523..2708#2327..2449#2116..2231#821..1376#ggaggcccgtcttctccctagtctctcttcttcccccttatctctagggaggaaagaaaaataacaagaacgcaccttttgtctctctcctctcctccgaggtaaggtaaagcttctccccccctatccccatggcgtccatcctagctcgttttctctctgtaaattatatcgttcttggttggttcctgttgttggctgccgggtgggggggattgtggtgcggaaaatttgagttcttggatggattagcgatcttttttttttagttcttggtattggcgatccctagagatgttatctctttcctgtatgggaataaagattacttttcttttgtttgtttgggtgttggtgttgtgaggatgtttgtggatagggatgctgtgttgtatcggtgatctttatccaattctctatcttgggtgtgtggttcagtgattgaacagatgggagtggtagttctttttgctgggagttttgtagcagtgcaatttccttctgaactaatcatagagtagaaagaagaggaaacaaatatatactggagaaatagctatttatgatttgcaatttaatgaatatctttttagatgatgtgcaaatttagtgaagaagatgaagcacagtatctttggtttagaaacgaaagaataataagcagagcatgttttgtagtgttattgtagattccatactctccattgtgcttatctctgagcatttagcttacttccattggggatcaagtatctagattagtttctaactatatcagaattgttggtcccgaacaggtttggggaagctacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcaggccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttggcgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcatagcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagatcaagacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaagctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcggtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgctcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattgggaggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttggagctttcattggaagaagctcgtcagctaggtatgtcttgcattttgattgatttgattttatcactaatttttgtttttattgtacctaatcacacttcaaaaattgaaatccaatagacggacagtgacatctatgtatcaaaaagtctcaatgtgtattgcttagctatccaatcattctcactcactaattaccaacaatccatggatcactctggtttggtgatgaaactgaacctaatcagaagggtagtgactttcataaatagtagttggttattgttgctgtcacacttttggccctaaccaacatgttgctttctaaatgggctgaattggaagtcaccaacatatacttcaagacatcatattcttgttaaatatgtactactaaaagtgctaacttctcctcttacggtaaagtaaaagtaaaaagacgagttacaatggactagttgcatgattatgtaccttgttaatttggtttgccacatctgttgttcttgtattgtttggaattctcttattcattatgggaactattcccttcgcattggtgtattcattggcttatcggtgttactcatattgaatacatggttgctaagctgctgactgttcacatgttaacaaaagaaacttttatatcactatggattttgtatgccgtgatgtgatgcatctgattttcttattatatttcaacatatgagtgtatgacatagaagatcattggttttccagacttgatgcccttatgtttccaggacacaactatattggatctgagcacttgcttcttggactgctccgtgagggtgaaggtgtagcagcccgtgtgctcgaaagccttggagccgatcctagcaatattcgcacgcaggtaaatgatgtgcatatatctgaattttttctcctctctgtacgagtagtctttgtttttctttagcatttataacgaacataacatgcatctaggttatccgaatgattggcgagactacagaagctgttggtgcaggagttggaggagggagtagtggcaataaaatgccaacacttgaggagtacggaactaatttaacaaaattagcagaggaggtaatgtttttgtcctattgcaacatagtagcacttgtgcatgcataattgttaactctgataatctctgtagggaaagctagatcctgttgttggaaggcaaccccagattgagcgtgtcgtacaaattctgggcagacgaacaaagaacaacccatgcttaattggagagcctggtgttggaaagacagcaattgcagaaggccttgctcaacgcatttctactggtgatgtgcctgaaacaattgaaggaaagaaggtatactttgtttctttaattgttcatgatatacccaataccatatgcattaatccttatatttcctctgtgagttgtaaacatcttagcgtaggcttgattgtggcccctttatgtgttaggtctttctgtgctctcttgcttgggcttttgtgtaattagtgagaaaattatctcatatttatttgaacttatttactgcaggtcattacccttgatatgggacttcttgttgctggtacaaaataccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgatgagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggtgctattgacgctgctaacattttaaagccagcattagcaagaggagaactacaggtatgtggatggtactctggtctatttgttgtttaatatatgcactatctaccatcattgtgtcatgctgaacctcttgatgtcttcttagttactataatgtctcacaatatattctctttgtttgatttcagtgtattggagccaccacacttgatgaatacaggaagcatattgagaaagacccagcattagaaagacgtttccagcctgtaagagtgccagagccaacagttgatgaaaccatagaaattctcagagggcttcgggaacgatatgagatccatcataaacttcgttacactgatgatgctctgatttcagctgccaagctatcttatcaatacatcaggtgtgtgaattacttggttataagctataaaatatcacctcgttgagcgcgcatattgttcgtggaccttctgtagcatttcaataaaatgtttgtgaggagtttcccagttgaaagattaaattattgaacaggacatatgttactatcagagtcaacaactcaactgtctattgaataaaatatagcttgactactatatatatcattcagattttatttatctgacacattattttgtttgcagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgtaaggcttcgacatgcccaggtattgaatttggtcatatgctaccatttgtttggatgttccacacattttgcaatttcttgcatgctctacacaatatctgagtccagccatttctacaggttcctgaagaagctagagagcttgacaaggagctcaagcaaatcacaaaagataagaatgaagctgtccgtagccaggacttcgaaaaggtaactgcctatggatgagctactagatttttatctgtcttcaagttcgtaaagcaacttaactgtttaaatgcttactgaattactatccgttgttatgtgaaatgacaattataattcatacatggcatagttaattaaggtcatctaggaattctttgtacattccatcaaaacaaagtttctatttaagttgatgactgtctactgttcatcaaactgtttcttgaaattctatccaagtagtagtgtctgtgcatattgccttcccattacttcgcccatatacataagtcaatgcttgtcaatttgccttttgtttgatagaaatgataacttataattggttggatatatttgaatttgttgacattaggctggagagttacgtgatcgtgaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaagcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacattgtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagcttcttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagccataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgcaagcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgacttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcgattacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaagcagtacttccgccccgagttcctcaaccgtctcgacgagatgatcgtcttcaggcaactcaccaagctggaggtcaaggagatcgccgagatcatgctcaaggaggtctttgacaggctcaaggccaaggacattgacctccaggtcaccgagaagttcaaggagcgtatcgttgacgaaggcttcaacccgagctatggtgcgaggccgctaaggagggccatcatgaggctcctggaggacagcctcgcggagaagatgctagctggggaggtgaaggagggtgattctgccattgtcgatgtggattccgaggggaaggtgattgtactgaatggccaaagtgggttgcctgagctttcaactccggctgtcactgtgtagtagttcatatatactgcagagtgttaagagatgcagtgcttttcattcagatatatttctgcatagttagcaacttagcataactgtatatatagtatatacaaatcaaaggaggaggaaacaccagctgattcctggtttctcatgtttgggacacctttttttttattaacaataatttcatatggtagagggatctt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001072974.1 RefSeq:Os12g0230100]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 12]]
 
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[[Category:Chromosome 12]]
 

Latest revision as of 03:39, 15 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information