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| | ==Annotated Information== | | ==Annotated Information== |
| − | ===Function===
| + | |
| − | Please input function information here.
| + | ==Function== |
| | + | In 1500bp upstream of the ATG start codon region，in addition to the basic core promoter acting element,there are some plants resist acting element processes related to abiotic stress , abscisic acid response elements , the light -inducible promoter acting elements , pathogens inducing factor acting elements , as well as root-specific binding sites. |
| | | | |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here. | + | Please input evolution information here. |
| | + | Rice seedling endogenous Os05g0442400 gene expression may be mainly in the roots,with the continuation of the rice germ , the rice husk expression region of rice endogenous Os05g0442400 gene increases from top to bottom , and reach the maximum expression of the area after heading. |
| | | | |
| | ===Evolution=== | | ===Evolution=== |
| | Please input evolution information here. | | Please input evolution information here. |
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==References== | | ==References== |
| | Please input cited references here. | | Please input cited references here. |
| | + | 宋亚娥,张红梅,李建粤.水稻Os05g0442400基因启动子分析以及由Os05g0442400基因启动子引导GUS报告基因在转基因水稻中的表达.Journal of Shanghai Normal University(Natural Sciences).2013,42(2):186-191. |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
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| − | GeneName = Os05g0442400|
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| − | Description = Similar to MybSt1|
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| − | Version = NM_001062206.1 GI:115464142 GeneID:4338925|
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| − | Length = 1198 bp|
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| − | Definition = Oryza sativa Japonica Group Os05g0442400, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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| − | AP = Chromosome 5:21699994..21701191|
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| − | CDS = 21700263..21700449,21700718..21701079|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008398:21699994..21701191
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008398:21699994..21701191
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcgttctacctcggcagcatgggtggctcgccatcgtcatggggggtggcggaggtgccggtgccgagcagcaggccgtggagcaaggcggaggacaaggtgttcgagagcgcgctcgtggcgttcccggagcacacgcacaaccggtgggcgctcgtcgcgtcgcggctcccggggcgctcggcgcacgaggtttgggaacactaccaggtgctcgtggacgatgtcgacctcatcgagcgtggcatggttgcgtccccgggctgctgggacgacgacaacaacagcgccggccacggccgtggcagtggtggggatgagcgtcgtcgcggcgtgccctggactgaggaggagcacaggctatttcttgaagggctagagaaatatgggcgtggcgactggcgcaacatctcgcgctggtcggtgaagacgcggactccgacgcaagtggcgagccatgcgcagaagttcttcatccgacaggccaacgccagcagccgtggcgactccaagcgtaagagcatccacgacatcactgccccatga</cdnaseq>|
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| − | AA = <aaseq>MAFYLGSMGGSPSSWGVAEVPVPSSRPWSKAEDKVFESALVAFP EHTHNRWALVASRLPGRSAHEVWEHYQVLVDDVDLIERGMVASPGCWDDDNNSAGHGR GSGGDERRRGVPWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFI RQANASSRGDSKRKSIHDITAP</aaseq>|
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| − | DNA = <dnaseqindica>743..929#113..474#agatccaaggctatctaagcaccggcatttgcatacagccgcctaagcaaagagcacagcaagtatacgcgaatctgagtgtgtgagagagactagtagcacagacgaaggtatggcgttctacctcggcagcatgggtggctcgccatcgtcatggggggtggcggaggtgccggtgccgagcagcaggccgtggagcaaggcggaggacaaggtgttcgagagcgcgctcgtggcgttcccggagcacacgcacaaccggtgggcgctcgtcgcgtcgcggctcccggggcgctcggcgcacgaggtttgggaacactaccaggtgctcgtggacgatgtcgacctcatcgagcgtggcatggttgcgtccccgggctgctgggacgacgacaacaacagcgccggccacggccgtggcagtggtggggatgagcgtcgtcgcggcgtgccctggactgaggaggagcacaggtatgtgtccaatacgtgccatcaaatcccggttctattccatgttatttttcattttttctgttattttcggtgcgctctttgagatcctaggtattattatattgttcttttcacatcggattacttccctggcccacatcacctgtctcaccaacacgcaggccctagatttccctatagcaacagtaccttgcactacacgtctactatatcgagttacggctaatttcctctttctctctttttctattattattatgaataggctatttcttgaagggctagagaaatatgggcgtggcgactggcgcaacatctcgcgctggtcggtgaagacgcggactccgacgcaagtggcgagccatgcgcagaagttcttcatccgacaggccaacgccagcagccgtggcgactccaagcgtaagagcatccacgacatcactgccccatgatgtgtggtccgatcgaggatatgcattatgatccggtccagtctaggtttagttgtatttccatcaattccaactagctttcaaccccatttcaaagaggagagaacgaagggagtttagtcgtcggccctccctgttagttcctctctctgtgttgtgtaaaatatagctaggcaatagctaaaactaagcttggctggaacctgagatcaattgttgtgatactagtttgtgtacttgtcaaataatatttgtatccgtttaatttc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062206.1 RefSeq:Os05g0442400]|
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| − | }}
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| | [[Category:Genes]] | | [[Category:Genes]] |
| | [[Category:Japonica mRNA]] | | [[Category:Japonica mRNA]] |
Please input one-sentence summary here.
Annotated Information
Function
In 1500bp upstream of the ATG start codon region，in addition to the basic core promoter acting element,there are some plants resist acting element processes related to abiotic stress , abscisic acid response elements , the light -inducible promoter acting elements , pathogens inducing factor acting elements , as well as root-specific binding sites.
Expression
Please input evolution information here.
Rice seedling endogenous Os05g0442400 gene expression may be mainly in the roots,with the continuation of the rice germ , the rice husk expression region of rice endogenous Os05g0442400 gene increases from top to bottom , and reach the maximum expression of the area after heading.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
宋亚娥,张红梅,李建粤.水稻Os05g0442400基因启动子分析以及由Os05g0442400基因启动子引导GUS报告基因在转基因水稻中的表达.Journal of Shanghai Normal University(Natural Sciences).2013,42(2):186-191.
Structured Information
