Difference between revisions of "Os05g0458400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0458400| Description = Similar to AAA-metalloprotease FtsH| Version = NM_001062280.1 GI:115464290 GeneID:4339002| Length = 5798 bp| Defini...")
 
(Structured Information)
 
(2 intermediate revisions by 2 users not shown)
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{{JaponicaGene|
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This gene encodes ATP-dependent zinc metalloprotease FTSH 8, mitochondrial, homologue of AtFtsH3/10. It is a predicted gene base on homology comparison.
GeneName = Os05g0458400|
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Description = Similar to AAA-metalloprotease FtsH|
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==Annotated Information==
Version = NM_001062280.1 GI:115464290 GeneID:4339002|
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===Function===
Length = 5798 bp|
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Please input function information here.
Definition = Oryza sativa Japonica Group Os05g0458400, complete gene.|
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Source = Oryza sativa Japonica Group
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===Expression===
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Please input expression information here.
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===Evolution===
 +
Please input evolution information here.
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 +
You can also add sub-section(s) at will.
 +
 
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 
 +
==References==
 +
Please input cited references here.
 +
 
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==Structured Information==
  
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
AP = Chromosome 5:22564129..22569926|
 
CDS = 22564340..22564406,22564498..22564728,22564835..22564909,22565567..22565700,22566145..22566630<br>,22566810..22567577,22568323..22568550,22569250..22569729|
 
GCID = <gbrowseImage1>
 
name=NC_008398:22564129..22569926
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008398:22564129..22569926
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgagcctcgcctcgctcgcccgcgcgctctcccgccgctccgcgccctcctcctcccgcgcgcgccagggtttctccctcggtgggctaggtgggaccaccaggtcgccgccgccgccgtcgtcgccgctcccatcgctccatggcggggagggcggtgggctgggattgggattcgtccgcgggtacctgacggcggcgctggggaggcccgccgcggtgaaggctgggacagactggaggtccatcctcgcgaacccgcagttccggaggctcttctctgacgggtccaagaagaattacgagaactactaccccaagggcaagaaggaggcgccgaagggggatgggagtaacaagtctgattcgaagcaagattcaagtacagacgatcaatggaatttccaggagactgcctcaaagcaattgcaaaattttctggcacctctactgtttcttggactgatgctctcgtccttgtcgtcgagctcatcagaccaaaaggagataagcttccaggaattcaagaataagctactagaacctggtttagttgaccgcattgttgtttcaaataaatcagtggcaaaggtctatgtcaggagttcaccacagtcgaacagccaaggtcagaacactgatgccatcattaccaccaatgatgttccgagcaagcatactcccagcagatacaagtattacttcaatattggaagtgttgattcctttgaagaaaagttagaggaagcccaggaagctttgggagtagatccacatgattttgttccagtaacttatgttgctgaagtgaattggttccaagaagtaatgagatttgccccaacagtctttcttgttgggctaatatatttgatgagcaaaagaatgcagagtggttttaatattggaggtggacctggcaagggtggccgtggtatttttaatattggaaaagctcaggtgacgaagatggacaaaaattccaaaaacaaggtgttttttaaggatgtagctggttgtgatgaagctaagcaagaaataatggagtttgtgcatttccttaagaatcccaagaagtatgaagagttaggagctaagataccaaaaggtgccttgcttgtgggtcctcctggaacaggcaagactctgcttgccaaagctacagcaggagagtctggtgtgcccttcctgtctatttctggatcagatttcatggaaatgtttgttggggttggaccatccagggtacggaacttattccaagaagctcggcaatgtgctcccagtattatatttattgatgagatcgatgcgattggtcgtgcaagaggccgtggagggttttctggttcaaatgatgagcgtgaaagtactttgaaccagctgcttgtagagatggatgggtttggtacaacttctggtgttgttgttcttgctggtacaaataggcctgatattttagataaagccttgctaaggcctggaagatttgatcgccaaataacaatagacaagccagatataaagggccgtgatcaaatattccgcatatatcttaaaaaacttaaacttgacaatgagccatcattttattcgcaaaggctagcggctttgacacctggatttgcaggagctgacattgccaatgtttgtaatgaagctgctttaattgctgcgagaagtgaggaaactcagattaccatgcaacattttgaatctgcaattgatagaattattggtggtttggagaagaaaaacaaggtcatcagcaaactggagcgccgcactgttgcttaccatgaatctggtcatgctgttgctggatggtttttagagcatgcagagcctcttctgaaagttacaattgttccccgtggaacagctgctttaggatttgcacagtatgttccaaatgaaaatcttttgatgacaaaagaacagctttttgatatgacatgcatgacattaggtggccgagctgcagaggaggttttgattggaaggatctccactggtgctcagaatgacctggagaaagttaccaaaatgacctatgcgcaggttgctgtatacggtttcagcgaaaaggttgggcttctgtccttccctcagagggacgatggctttgaaatgaccaaaccttacagcaaccaaacagcatccatcatcgacgatgaggtgagggaatgggttggcaaggcgtacaaaaaaacagtggaactgataactgagcacaaggagcaagtcgccaaaatcgctgaaatgctgcttgagaaggaggtcctccaccaggacgatttggttagggtattaggagaacggcctttcaaggcatccgagccaactaactacgacctcttcaagcaagggttccaggatgaagaagacagcaagaaccaagaggcggccaaaacccctcagcctgatgatgacggaacaccctcgcttggcgaggttgtacccacgtaa</cdnaseq>|
 
AA = <aaseq>MSLASLARALSRRSAPSSSRARQGFSLGGLGGTTRSPPPPSSPL                    PSLHGGEGGGLGLGFVRGYLTAALGRPAAVKAGTDWRSILANPQFRRLFSDGSKKNYE                    NYYPKGKKEAPKGDGSNKSDSKQDSSTDDQWNFQETASKQLQNFLAPLLFLGLMLSSL                    SSSSSDQKEISFQEFKNKLLEPGLVDRIVVSNKSVAKVYVRSSPQSNSQGQNTDAIIT                    TNDVPSKHTPSRYKYYFNIGSVDSFEEKLEEAQEALGVDPHDFVPVTYVAEVNWFQEV                    MRFAPTVFLVGLIYLMSKRMQSGFNIGGGPGKGGRGIFNIGKAQVTKMDKNSKNKVFF                    KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES                    GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSG                    SNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDI                    KGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQI                    TMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVP                    RGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVLIGRISTGAQNDLEKVTK                    MTYAQVAVYGFSEKVGLLSFPQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVE                    LITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGERPFKASEPTNYDLFKQGFQDEEDSK                    NQEAAKTPQPDDDGTPSLGEVVPT</aaseq>|
 
DNA = <dnaseqindica>212..278#370..600#707..781#1439..1572#2017..2502#2682..3449#4195..4422#5122..5601#ggtaaaacgccttctccccctcctcttccgccgccgcggcgatccctctttcacctccacctccacctgctcaggacgcggccacgcagtagtcgcggagaaaagaaaccgaaaagaaaaaaaaaaatctagctacgcatctcggcccggcccccccgccgccgcgcgctcggatcccccgacggctcgccgccacggcgccgccgccgccatgagcctcgcctcgctcgcccgcgcgctctcccgccgctccgcgccctcctcctcccgcgcgcgccaggcaagtctccgccctctccctcttatcttccctgaatcttccgccaccgcgtctgggtggggggctgattgtgtggatggcttttttttagggtttctccctcggtgggctaggtgggaccaccaggtcgccgccgccgccgtcgtcgccgctcccatcgctccatggcggggagggcggtgggctgggattgggattcgtccgcgggtacctgacggcggcgctggggaggcccgccgcggtgaaggctgggacagactggaggtccatcctcgcgaacccgcagttccggaggctcttctctgacgggtccaagaagagtgagtcccatccgcccttttttgatcggttcggatggatggctttaggtgctaaaagtttgtggttgtgtttttgtgtgtgtgtgtgtatttttatgatttttagattacgagaactactaccccaagggcaagaaggaggcgccgaagggggatgggagtaacaagtctgattcgaagcgtaagttgccgtcttttttttctcggttgcatcatttgtttgtgtggagaatggtgatcatgttgtgaaattaatagaatgcactgcacagcttttaatacaatagcatgtaactggtgtactgattgtcattgaaccaacgaggtgaataatcaggacatgttatttttcttgcgctgcaagtgcttggtcgactgatgccaaatggaaaaatagcttgtgtagtgcaaccaatgatggcttgtgagcctatggtgtacaaccacttacttgtcagtgttcttaaaaaacgaatgcaaactagatccttgttcagttttaaaaaaatgcagggatacactgtaatttagtataaaaactcagaacctcagtggttatctaacttaagaggctgaaccgctgaaccaaataaacacagtagcacagaaagttccagattttggtctttgctagatcgttagttctctggaaattaaaacgtgccgctgacctagcactttcatcttaataatttctttgggagattagtacgggttttgatggagattggagcctagattttagtggctggaatgccaagagtccttttgagggcaacaaaataataaactcttagtgcatcattgcgtgtgggctaatgtctggtttgatatgcagaagattcaagtacagacgatcaatggaatttccaggagactgcctcaaagcaattgcaaaattttctggcacctctactgtttcttggactgatgctctcgtccttgtcgtcgagctcatcagaccaaaaggaggtaatttttcactcccttctgagttctgacagattatattcacttgttctgctatgcacatgaatctcttcctatatactagaaaaaagtggatggaagaaaactatgttgcgattataaggactataaaagttgtacttaccccaatcaaattactgcaatcagctattgagcattctgtaataaatagttcaatacaagcagtactagatccagatggcagcaatacattcttctcaccgtgaagttttatcttaaactgacaaatggtagagaaaatacctgccgctcctctttagatggtttcaccttatgcctgcaccagtcaacatatagcagacaactgattttgtggttgcatatttattctttttaaatctatggtgaacaattattctcgatcttaaatggaatctcaagatattttgcttcaaatttctgcagataagcttccaggaattcaagaataagctactagaacctggtttagttgaccgcattgttgtttcaaataaatcagtggcaaaggtctatgtcaggagttcaccacagtcgaacagccaaggtcagaacactgatgccatcattaccaccaatgatgttccgagcaagcatactcccagcagatacaagtattacttcaatattggaagtgttgattcctttgaagaaaagttagaggaagcccaggaagctttgggagtagatccacatgattttgttccagtaacttatgttgctgaagtgaattggttccaagaagtaatgagatttgccccaacagtctttcttgttgggctaatatatttgatgagcaaaagaatgcagagtggttttaatattggaggtggacctggcaagggtggccgtggtatttttaatattggaaaagctcaggtgacgaagatggacaaaaattccaaaaacaaggttagttcattctcttcttctgttctactttgaaacgactgtcaaatatgaaatatatacatgcacattgattctcaagctctgctagttccacctattcaataatgcagtagctactgcttaaacgttgttaagttacaataaaaactgtataatgacaagcttttctgttggtccaggtgttttttaaggatgtagctggttgtgatgaagctaagcaagaaataatggagtttgtgcatttccttaagaatcccaagaagtatgaagagttaggagctaagataccaaaaggtgccttgcttgtgggtcctcctggaacaggcaagactctgcttgccaaagctacagcaggagagtctggtgtgcccttcctgtctatttctggatcagatttcatggaaatgtttgttggggttggaccatccagggtacggaacttattccaagaagctcggcaatgtgctcccagtattatatttattgatgagatcgatgcgattggtcgtgcaagaggccgtggagggttttctggttcaaatgatgagcgtgaaagtactttgaaccagctgcttgtagagatggatgggtttggtacaacttctggtgttgttgttcttgctggtacaaataggcctgatattttagataaagccttgctaaggcctggaagatttgatcgccaaataacaatagacaagccagatataaagggccgtgatcaaatattccgcatatatcttaaaaaacttaaacttgacaatgagccatcattttattcgcaaaggctagcggctttgacacctggatttgcaggagctgacattgccaatgtttgtaatgaagctgctttaattgctgcgagaagtgaggaaactcagattaccatgcaacattttgaatctgcaattgatagaattattggtggtttggagaagaaaaacaaggtaatgtgaatatgtgattatgtgccagtttgaagataatctactccaaactgttaaagcaataaatgcaacctgcaaagctgattagtgcctgatttacacattactccagcattgtgtagttctgtatagtgctctcatgtgaaccggttatgctctattttgatacacattttttgctggtttaatgactatggaagttttgtttttttaaaaaaacaaaaacaaaagaacggtacataatgactagtgcattcattaagttcctgttctaggtggaccttaattaagttaagtgatttgtgaatgtggcatgatagttcgtgtagatcactagatggttgatcatgcatgaatgtttaggtgagagtgctgtaaacaaggtaaactatataaaataagtagtggatctacatgcaaatataaaaaactctaggtcttactcagaaatggatggtcacttaagtgtacgcaaaataatgatttctgaaatttgtggctttgcacacacaatatctgcagtatgtttcccttttggaatgcccaagccataactgttttttcacctttaacttgttccatagtaaatatataaaatatctactttcagtaagggagtaatgcacagatcaatgcttagtaacttagtaactttcttttatatgaaatgacttgttctcaacatgtgatagtcatgtttccccatttatttttcttacctcttagcctgttaatcaaattgcaggtcatcagcaaactggagcgccgcactgttgcttaccatgaatctggtcatgctgttgctggatggtttttagagcatgcagagcctcttctgaaagttacaattgttccccgtggaacagctgctttaggatttgcacagtatgttccaaatgaaaatcttttgatgacaaaagaacagctttttgatatgacatgcatgacattaggtggccgagctgcagaggaggtacacactaattcttttacagtcttatgactgatttatgttaatagctaccttttgtggatatatctttcaaattcctactgctgagtgctgacacaccatttcttttcagtcttcttatgacagcatgcgtgttatgtttttatgactagaacgaatacaaggtttttctgcatttgacagctgtaaaaaaattaaaaaaaaatggttaactaggttacagtttacacattcaattatgatgacttggtgaatacgagtaatattatcacaatttggtagtcaaactcttgttggtttggttacatcaagacttctaaccatttatgactctaaccagaaaggcaaattgatgtttgtgtgtcttcatattacactgttggttagcatgaattctttgatgtttaacatggtactttctttttttgcttggaccatatgcttatgtacggcgagactcgacatggattgccgtcatgccatttgattactttaacatcggtcctctctcattattttcagcttcttccatacattttacttattgtcatataacataatgaaataacaataagccaatccaagtgctgggttgtggtatttgttcattccatatttccatgattacgctgtcaaatcgttcacaatgttggcagtggaatgatacctaatgtagatgttttgattgccttgttacaggttttgattggaaggatctccactggtgctcagaatgacctggagaaagttaccaaaatgacctatgcgcaggttgctgtatacggtttcagcgaaaaggttgggcttctgtccttccctcagagggacgatggctttgaaatgaccaaaccttacagcaaccaaacagcatccatcatcgacgatgaggtgagggaatgggttggcaaggcgtacaaaaaaacagtggaactgataactgagcacaaggagcaagtcgccaaaatcgctgaaatgctgcttgagaaggaggtcctccaccaggacgatttggttagggtattaggagaacggcctttcaaggcatccgagccaactaactacgacctcttcaagcaagggttccaggatgaagaagacagcaagaaccaagaggcggccaaaacccctcagcctgatgatgacggaacaccctcgcttggcgaggttgtacccacgtaatcctgcagcaaatttacagctgtaaattgcactcctattcgatagattcttgtttgttgttgcagcataagaaaatttgtataaattaacgccctcgcctaatctctgatgtgggaacccagttggcttttcgccggccatagtgtttccctgttttaaatgaatacgaagagctagtcgaggatcatgatttgagc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062280.1 RefSeq:Os05g0458400]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 07:39, 12 June 2015

This gene encodes ATP-dependent zinc metalloprotease FTSH 8, mitochondrial, homologue of AtFtsH3/10. It is a predicted gene base on homology comparison.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information