Difference between revisions of "Os06g0625900"

From RiceWiki
Jump to: navigation, search
(References)
(Structured Information)
 
(6 intermediate revisions by one other user not shown)
Line 6: Line 6:
  
 
===Expression===
 
===Expression===
Please input expression information here.
+
[[File:QQ图片20140608232107.jpg]]
 +
----
 +
 
 +
 
 +
K+loss in the E. coli strain TKW4205 transformed with plasmid pBAD24 containing the OsHAK1-1, OsHAK7, or OsHAK10 cDNAs. Time courses of the K+ contents of cells induced in 13 mM Ara and suspended in K+-free minimal medium, pH 5.5, supplemented with 4.9% (w/v) sorbitol, and 10 mM propionic acid. Black circles, Cells transformed with pBAD24; white circles, cells transformed with OsHAK1-1; black triangles, cells transformed with OsHAK7; white triangles, cells transformed with OsHAK10
 +
----
 +
 
 +
 
 +
[[File:QQ图片20140608232936.jpg]]
 +
----
 +
 
 +
 
 +
Tonoplast localization of HAK10: GFP. Transient expressions in onion epidermal cells of a OsHAK10:GFP translational fusion protein was visualized by epifluorescence microscopy. A, GFP fluorescence concentrated to the tonoplast. The large vacuole of onion epidermal cells occupies most of the cell volume. B through D, Captions of different focal planes of the cell imaged in A, showing transvacuolar strands of cytoplasm (tvs). Note that the transvacuolar strands seen in C and D are lined by two tonoplast membranes. E, The tonoplast follows the cell contour except in the perinuclear region (n) where the vacuole detaches from the cell surface. F, Clear field caption of the cell shown in E depicting the perinuclear region (n). As controls, transient expression assays in onion epidermal cells of GFP and AtNHX1:GFP were carried out in parallel. G, In the control cell expressing GFP, the fluoresce concentrated in the cytoplasm and was manifestly absent in the vacuole. H, In the control cell expressing AtNHX1:GFP, the fluorescence concentrated to the tonoplast showing the perinuclear region (n). Bar = 25um. Please input expression information here.
 +
----
  
 
===Evolution===
 
===Evolution===
[[File:QQ图片20140608222722.jpg ]]
+
[[File:QQ图片20140608232126.jpg ]]
 +
 
 +
Phylogenetic tree of rice cv Nipponbare HAK transporters and barley transporters HvHAK1 and HvHAK2. Alignments of the sequences were performed with the ClustalX program. The scale bar corresponds to a distance of 10 changes per 100 amino acid positions. Accession numbers: HvHAK1, T04379; and HvHAK2, AAF36491;
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
Line 21: Line 36:
 
Marı,, a A. Bañ, uelos, Blanca Garciadeblas, Beatriz Cubero, Alonso Rodrı,, guez-Navarro  
 
Marı,, a A. Bañ, uelos, Blanca Garciadeblas, Beatriz Cubero, Alonso Rodrı,, guez-Navarro  
 
Plant Physiology, 2002, 130(2): 784-795
 
Plant Physiology, 2002, 130(2): 784-795
 +
 
'''Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.)
 
'''Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.)
 
'''Huan Wang; Meishan Zhang; Rui Guo; Decheng Shi; Bao Liu; Xiuyun Lin; Chunwu Yang
 
'''Huan Wang; Meishan Zhang; Rui Guo; Decheng Shi; Bao Liu; Xiuyun Lin; Chunwu Yang
Line 26: Line 42:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
 
GeneName = Os06g0625900|
 
Description = Potassium transporter 10 (OsHAK10)|
 
Version = NM_001064651.1 GI:115469033 GeneID:4341573|
 
Length = 4353 bp|
 
Definition = Oryza sativa Japonica Group Os06g0625900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
 
AP = Chromosome 6:26115342..26119694|
 
CDS = 26115342..26116097,26116211..26116617,26116746..26117000,26117099..26117222,26117336..26117388<br>,26117473..26117733,26118735..26118788,26118880..26119447,26119641..26119694<br>|
 
GCID = <gbrowseImage1>
 
name=NC_008399:26115342..26119694
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008399:26115342..26119694
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgaagagcccgtctcccgtggatcctgagtcgccgagttctcccgattgcaagggagggagcagcagcaagaggaggcggctgccatggcggatgacgatgagcctggcgtaccagagcctcggggtggtgtacggcgacctgagcacgtcgccgctgtacgtgtacaaggcggcgttcgcggaggacatccagcactcggagaccaacgaggagatcctcggcgtgctctccttcgtcttctggacgctcaccctcgtcccgctcctcaagtacgtctgcgtcgtcctccgcgccgacgacaacggcgagggcggcaccttcgccctctactccctcctctgccgccacgcccgcgccgcgctcctcccgcctggcggcggcggcggcggcggcgagccgggcgacgaggaccagttcttggacgcgggcgccgacaagaaagccgcggcgaacggcaatgcgctggcgctgagcgggcgcggcggcggaggcggcgccgccgccggcgtgaggaggctgctggagcggcacaaggtgctgcagcgcgtgctcctcgtgctggcgctggtgggcacgtgcatggtcatcggcgacggcgtgctcacgccggccatctccgtgttctcggcggtatccgggctggaattgtccatggaaaagcatcagcacaaatatgtggaggttcctattgcttgttttgtactggtttgcctgttttgtctgcaacactatggtacacaccgggtggggttcctttttgcaccaattgtgattacatggcttctatgtataagcatgattggtgtttacaatatcgtgcattgggagcccaatgtctatcgagcgttatctccatattatatgtacaagtttttgaagaagacgcagagaggaggttggatgtcactgggaggaatattgttatgtatcactggttctgaagcaatgtttgcagatctggggcattttaatcagctgtcgatacagattgcttttacttgcatggtttacccatccttgatccttgcatacatggggcaagctgcttatctgtgtaagcatcacatcattgaaagtgactacaggatcgggttctatgtgtctgtgcctgagaaaattaggtggccagttctggcaattgccattcttgcagcagttgtcgggagccaagctgttatcactggcacattctcaatgatcaagcagtgcaccgctctcggctgctttcctcgggtgaagatagttcacacatctgacaaagtacacgggcaaatttacatccctgagatcaattggatcctgatgatactgtgcttagctattaccattggtttcagagacacaaaacacctgggcaatgcgtcaggattggcggttataaccgttatgctggtcacgacatgtctgatgtccctggtgatagttctgtgttggcacaagagcatcttcctcgcattcggcttcatcatcttcttcggcaccattgaggcactctacttctcagcatcactcatcaagttcagagaaggagcctgggtcccaattgtgctggccttcatcttcatggcgataatgtgcatctggcactatggcaccatcaagaagtatgagttcgatctccagaacaaggtctccatcaactggctccttggcctcagccccaacctcggcattgtccgagtccgcggcatcggcctcatccacaccgagctcgactctgggatcccggcaatcttctcgcatttcgtcaccaacctacctgcatttcatcaagtgctcatcttcctctgcatcaagaacgtcccgataccgcatgtctcgccggaggagaggttcctcgtcggaagaattggccccaaggagtacagaatctaccggtgcattgtcaggtacggctaccacgacgtgcacaaggacgatcaggagttcgagaaggagctcgtctgcagcgtcgcggagttcatccgctccggcgccgccgccgcggccgacgccgcggcctcttccaagcccaagaacgtctgcggcggcggcgcggaggagtcggagaaagaggaggaggagcggatgtccgtcatcccctccggcagcattcggatgatggaggaggacggcggcgcgggggcgccgtcgtcggaggacaccgtcggcggcagcggcagcggcagcggcagaggcagctcgcgcggcggcggcggcgcaagggagatcatgtcgccgtcgccgtcgccgccgccggtggtggtggcgccgaggaagagggtgcggttcgtgctgccggcggcgagcccgcggccggacgccggcgtgcgggaggagctgcaggagctgatggacgcgcgcgaggccggcatggcgttcatcctcggccactcctacgtcaaggccaagagcggctccagcttcttccggcggctggtcatcaacttctgctacgacttcctccgccgcaacagccgcggccccaactacgccgtcaccatccctcacgcctccaccctcgaggtcggcatgatttactatgtctaa</cdnaseq>|
 
AA = <aaseq>MKSPSPVDPESPSSPDCKGGSSSKRRRLPWRMTMSLAYQSLGVV                    YGDLSTSPLYVYKAAFAEDIQHSETNEEILGVLSFVFWTLTLVPLLKYVCVVLRADDN                    GEGGTFALYSLLCRHARAALLPPGGGGGGGEPGDEDQFLDAGADKKAAANGNALALSG                    RGGGGGAAAGVRRLLERHKVLQRVLLVLALVGTCMVIGDGVLTPAISVFSAVSGLELS                    MEKHQHKYVEVPIACFVLVCLFCLQHYGTHRVGFLFAPIVITWLLCISMIGVYNIVHW                    EPNVYRALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFNQLSIQIAFT                    CMVYPSLILAYMGQAAYLCKHHIIESDYRIGFYVSVPEKIRWPVLAIAILAAVVGSQA                    VITGTFSMIKQCTALGCFPRVKIVHTSDKVHGQIYIPEINWILMILCLAITIGFRDTK                    HLGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAFGFIIFFGTIEALYFSASLIKF                    REGAWVPIVLAFIFMAIMCIWHYGTIKKYEFDLQNKVSINWLLGLSPNLGIVRVRGIG                    LIHTELDSGIPAIFSHFVTNLPAFHQVLIFLCIKNVPIPHVSPEERFLVGRIGPKEYR                    IYRCIVRYGYHDVHKDDQEFEKELVCSVAEFIRSGAAAAADAAASSKPKNVCGGGAEE                    SEKEEEERMSVIPSGSIRMMEEDGGAGAPSSEDTVGGSGSGSGRGSSRGGGGAREIMS                    PSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELMDAREAGMAFILGHSYVKAK                    SGSSFFRRLVINFCYDFLRRNSRGPNYAVTIPHASTLEVGMIYYV</aaseq>|
 
DNA = <dnaseqindica>3598..4353#3078..3484#2695..2949#2473..2596#2307..2359#1962..2222#907..960#248..815#1..54#atgaagagcccgtctcccgtggatcctgagtcgccgagttctcccgattgcaaggtatgggttgggtggtggaggtcgtgtcatgtttgatggttaatggtctaatcttgtcgggtttgcgagggttgtggtggtcgtgattgattgattgatcatggtgttgttgaatcttggtgcgatcttggattctttgctaatgtgtgtgtgcgcgtgtgatttgatttgggtgggtggatggatggagcagggagggagcagcagcaagaggaggcggctgccatggcggatgacgatgagcctggcgtaccagagcctcggggtggtgtacggcgacctgagcacgtcgccgctgtacgtgtacaaggcggcgttcgcggaggacatccagcactcggagaccaacgaggagatcctcggcgtgctctccttcgtcttctggacgctcaccctcgtcccgctcctcaagtacgtctgcgtcgtcctccgcgccgacgacaacggcgagggcggcaccttcgccctctactccctcctctgccgccacgcccgcgccgcgctcctcccgcctggcggcggcggcggcggcggcgagccgggcgacgaggaccagttcttggacgcgggcgccgacaagaaagccgcggcgaacggcaatgcgctggcgctgagcgggcgcggcggcggaggcggcgccgccgccggcgtgaggaggctgctggagcggcacaaggtgctgcagcgcgtgctcctcgtgctggcgctggtgggcacgtgcatggtcatcggcgacggcgtgctcacgccggccatctccggtgcgtgcgcgcccccgcttgatttgctggcttgtttgtgttcttgggttgtcgtgtgctgattttcagatggcgtgttctgtttttgcagtgttctcggcggtatccgggctggaattgtccatggaaaagcatcagcacaaatgtaaggatctgaacacccaaccatgcctttgtcccttccattgtttctgtcttttgatatgattgtagatttgtcttcctcatcttgttaactactgtttcctggatcatcatgttctgagtttttttagataattcagggtccacctcaaactcaaaagggtgcagtttcttgtttttttagttgaaaaaagtgtgcagtttcagtcatactagtgcaccacaattcgagtaaattttacctgtaagatgcacgcaagagatggattctgtgcaatttggtgttcgtaaaaccaggaattatgttaactgatgaagtctgaacagtttgcttcaatgggattgatacttttggaagtttccgtgcgagcttatcggctcagatatcagatgatcaattgcgtgccaaattcatttaggaaggtctttgacagggaatgaccatgagcaacgcagcgttgtcgcatggacaccaacaatcaactccgtactgttgttagtcaatgtatgcctaacagttgttgctataatgctattagcctacgaactggagaagattaatactcttatctagtagcattgatgactacaataaatggaactaccctactcaagcagttgtgattcttgtgaagaactgtagtgggaaacagaaagaaaagatttgagcgattcctaaataagccggtcatcatctaaattactgtatctgttcagttcatattctcttgggctttggcagaggatagagttcactctgggcagaaatatggtcagctagtggtaataaggttcggaaattctggaaaatggaagctacacatgctgaaagtaataaaataagtgctgaattctgaagtgcggagtaaagaaactctattttgacttttaatcatttaagcatgtgcttttattctgattcttgttttgctaatatgttttgtttcttttttaacccattactaactgtgcaaagttttttttactgatttgaatctgcagatgtggaggttcctattgcttgttttgtactggtttgcctgttttgtctgcaacactatggtacacaccgggtggggttcctttttgcaccaattgtgattacatggcttctatgtataagcatgattggtgtttacaatatcgtgcattgggagcccaatgtctatcgagcgttatctccatattatatgtacaagtttttgaagaagacgcagagaggaggttggatgtcactgggaggaatattgttatgtatcactggtactatgatcaacaaccattttctaccatatgccaatgatctctgaagtgtacaactttactaacttgagtgttgtttttcaggttctgaagcaatgtttgcagatctggggcattttaatcagctgtcgatacaggtgatgaaatagagtgcaatctcaatgttttgttttacttggtttcatcatagtagcaatatgcggacatgcggtcaatagttttgtctctgataagcatttcctgattgcagattgcttttacttgcatggtttacccatccttgatccttgcatacatggggcaagctgcttatctgtgtaagcatcacatcattgaaagtgactacaggatcgggttctatgtgtctgtgcctggcaagtcatgttctccagatctttcatcaacagcgaaatcgatattatatcattctcctagtactgtttattaatatttaaaagttttccatcctcagagaaaattaggtggccagttctggcaattgccattcttgcagcagttgtcgggagccaagctgttatcactggcacattctcaatgatcaagcagtgcaccgctctcggctgctttcctcgggtgaagatagttcacacatctgacaaagtacacgggcaaatttacatccctgagatcaattggatcctgatgatactgtgcttagctattaccattggtttcagagacacaaaacacctgggcaatgcgtcaggtatgtaccacttgttttagtttttgacatatcaaaccacctgattattccatgttcgaattacctatgcatactgaagctaatgagtaaggaatttgtctgatatgcaatagttgtcctttgaacaggattggcggttataaccgttatgctggtcacgacatgtctgatgtccctggtgatagttctgtgttggcacaagagcatcttcctcgcattcggcttcatcatcttcttcggcaccattgaggcactctacttctcagcatcactcatcaagttcagagaaggagcctgggtcccaattgtgctggccttcatcttcatggcgataatgtgcatctggcactatggcaccatcaagaagtatgagttcgatctccagaacaaggtctccatcaactggctccttggcctcagccccaacctcggcattgtccgagtccgcggcatcggcctcatccacaccgagctcgactctgggatcccggcaatcttctcgcatttcgtcaccaacctacctgcatttcatcaagtaatcttgctcatcagccatcattcctcgccttctgaagttgttgtcattgttcagaaattcagaattttggttacagtgctcatcatcttcttcttcttgatgatgatcaggtgctcatcttcctctgcatcaagaacgtcccgataccgcatgtctcgccggaggagaggttcctcgtcggaagaattggccccaaggagtacagaatctaccggtgcattgtcaggtacggctaccacgacgtgcacaaggacgatcaggagttcgagaaggagctcgtctgcagcgtcgcggagttcatccgctccggcgccgccgccgcggccgacgccgcggcctcttccaagcccaagaacgtctgcggcggcggcgcggaggagtcggagaaagaggaggaggagcggatgtccgtcatcccctccggcagcattcggatgatggaggaggacggcggcgcgggggcgccgtcgtcggaggacaccgtcggcggcagcggcagcggcagcggcagaggcagctcgcgcggcggcggcggcgcaagggagatcatgtcgccgtcgccgtcgccgccgccggtggtggtggcgccgaggaagagggtgcggttcgtgctgccggcggcgagcccgcggccggacgccggcgtgcgggaggagctgcaggagctgatggacgcgcgcgaggccggcatggcgttcatcctcggccactcctacgtcaaggccaagagcggctccagcttcttccggcggctggtcatcaacttctgctacgacttcctccgccgcaacagccgcggccccaactacgccgtcaccatccctcacgcctccaccctcgaggtcggcatgatttactatgtctaa</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064651.1 RefSeq:Os06g0625900]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 08:20, 12 June 2015

Please input one-sentence summary here.

Annotated Information

Function

Potassium transporter 10,It's gene name is OsHAK10.Plants take up large amounts of K+ from the soil solution and distribute it to the cells of all organs, where it fulfills important physiological functions. Transport of K+from the soil solution to its final destination is mediated by channels and transporters. Rice protected young leaves from ion harm via the large accumulation of Na+ and Cl- in old leaves. The up-regulation of OsHKT1;1, OsHAK10 and OsHAK16 might contribute to accumulation of Na+ in old leaves under salt stress. A comparative kinetic analysis of HAK-mediated K+ influx in yeast and in roots of K+-starved rice seedlings demonstrated the involvement of HAK transporters in root K+ uptake.All HAK transporters may mediate K+ transport, but probably not only in the plasma membrane. Transient expression of the OsHAK10-green fluorescent protein fusion protein in living onion epidermal cells targeted this protein to the tonoplast.

Expression

QQ图片20140608232107.jpg



K+loss in the E. coli strain TKW4205 transformed with plasmid pBAD24 containing the OsHAK1-1, OsHAK7, or OsHAK10 cDNAs. Time courses of the K+ contents of cells induced in 13 mM Ara and suspended in K+-free minimal medium, pH 5.5, supplemented with 4.9% (w/v) sorbitol, and 10 mM propionic acid. Black circles, Cells transformed with pBAD24; white circles, cells transformed with OsHAK1-1; black triangles, cells transformed with OsHAK7; white triangles, cells transformed with OsHAK10



QQ图片20140608232936.jpg



Tonoplast localization of HAK10: GFP. Transient expressions in onion epidermal cells of a OsHAK10:GFP translational fusion protein was visualized by epifluorescence microscopy. A, GFP fluorescence concentrated to the tonoplast. The large vacuole of onion epidermal cells occupies most of the cell volume. B through D, Captions of different focal planes of the cell imaged in A, showing transvacuolar strands of cytoplasm (tvs). Note that the transvacuolar strands seen in C and D are lined by two tonoplast membranes. E, The tonoplast follows the cell contour except in the perinuclear region (n) where the vacuole detaches from the cell surface. F, Clear field caption of the cell shown in E depicting the perinuclear region (n). As controls, transient expression assays in onion epidermal cells of GFP and AtNHX1:GFP were carried out in parallel. G, In the control cell expressing GFP, the fluoresce concentrated in the cytoplasm and was manifestly absent in the vacuole. H, In the control cell expressing AtNHX1:GFP, the fluorescence concentrated to the tonoplast showing the perinuclear region (n). Bar = 25um. Please input expression information here.


Evolution

QQ图片20140608232126.jpg

Phylogenetic tree of rice cv Nipponbare HAK transporters and barley transporters HvHAK1 and HvHAK2. Alignments of the sequences were performed with the ClustalX program. The scale bar corresponds to a distance of 10 changes per 100 amino acid positions. Accession numbers: HvHAK1, T04379; and HvHAK2, AAF36491; You can also add sub-section(s) at will.

Labs working on this gene

(1)Department de Biotecnologı´a, Universidad Polite´cnica de Madrid, 28040 Madrid, Spain (M.A.B., B.G.,A.R.-N.); and Instituto de Recursos Naturales y Agrobiologı´a, Consejo Superior de Investigaciones Cientı´ficas, 41080 Sevilla, Spain (B.C.)

(2)Key laboratory of Molecular Epigenetics of MOE, Northeast Normal University, Changchun 130024 Jilin Province, China

References

Inventory and Functional Characterization of the HAK Potassium Transporters of Rice Marı,, a A. Bañ, uelos, Blanca Garciadeblas, Beatriz Cubero, Alonso Rodrı,, guez-Navarro Plant Physiology, 2002, 130(2): 784-795

Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.) Huan Wang; Meishan Zhang; Rui Guo; Decheng Shi; Bao Liu; Xiuyun Lin; Chunwu Yang BMC Plant Biology, 2012, 12 : 194

Structured Information