Difference between revisions of "Os07g0422100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0422100| Description = AWPM-19-like family protein| Version = NM_001066020.1 GI:115471772 GeneID:4343047| Length = 1000 bp| Definition = O...")
 
(Structured Information)
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
{{JaponicaGene|
+
Please input one-sentence summary here.
GeneName = Os07g0422100|
+
 
Description = AWPM-19-like family protein|
+
==Annotated Information==
Version = NM_001066020.1 GI:115471772 GeneID:4343047|
+
===Function===
Length = 1000 bp|
+
Please input function information here.
Definition = Oryza sativa Japonica Group Os07g0422100, complete gene.|
+
 
Source = Oryza sativa Japonica Group
+
===Expression===
 +
Please input expression information here.
 +
Os07g0422100 whose expression is induced by drought stress, was identified using drought-treated rice plants at the flowering stage, and was found expressing specifically in rice panicle after drought treatment. Os07g0422100 might contain a drought-inducible promoter which makes the gene specifically express in drought stressed rice panicle. When the reporter gene GUS was driven by the promoter of Os07g0422100, the reporter gene can be efficiently induced after drought treatment, therefore affording a method to assess the degree of drought stress.
 +
 
 +
===Evolution===
 +
Please input evolution information here.
 +
 
 +
You can also add sub-section(s) at will.
 +
 
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 
 +
==References==
 +
Please input cited references here.
 +
 
 +
==Structured Information==
  
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
 
AP = Chromosome 7:14268003..14269002|
 
CDS = 14268074..14268200,14268296..14268690|
 
GCID = <gbrowseImage1>
 
name=NC_008400:14268003..14269002
 
source=RiceChromosome07
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008400:14268003..14269002
 
source=RiceChromosome07
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggccggagtcgggaggaacatgctggcgccgctcttggtgctcaacctcatcatgtacctcatcgtcatcggcttcgcgagctggaacctcaaccacttcatcaatggccagaccaactacccaggcgtggcgggcaacggcgcgacgttctacttcctggtgttcgccatcctggccggggtggtgggcgcggcgtccaagctggcgggcgtccaccacgtgcgcgcgtggcgccacgacagcctcgccaccaacgcggcctcctccctcatcgcgtgggccatcaccgcgctcgccttcggcctcgcctgcaaggagatccacatcggcggccaccgcgggtggcgcctccgcgtgctcgaggctttcgtcatcatcctcgccttcacgcagctgctctacgtgctcatgctccacacgggcctcttcggtggcggcgacggcgcctaccgggaccacgactacggcgttggcgccggtgctgccgccggcgagcccaaggggacagcgagggtctga</cdnaseq>|
 
AA = <aaseq>MAGVGRNMLAPLLVLNLIMYLIVIGFASWNLNHFINGQTNYPGV                    AGNGATFYFLVFAILAGVVGAASKLAGVHHVRAWRHDSLATNAASSLIAWAITALAFG                    LACKEIHIGGHRGWRLRVLEAFVIILAFTQLLYVLMLHTGLFGGGDGAYRDHDYGVGA                    GAAAGEPKGTARV</aaseq>|
 
DNA = <dnaseqindica>72..198#294..688#tctcgatcgatctcttcttcgtcttctgcgtcgtcgtcgtcgtccagcggtgagctatcagggtagcagccatggccggagtcgggaggaacatgctggcgccgctcttggtgctcaacctcatcatgtacctcatcgtcatcggcttcgcgagctggaacctcaaccacttcatcaatggccagaccaactacccaggtacgacatcgatctgcatatctctgattcttgaaataaaagtgcatgcgacgtactgatatacaatgcgctcgaacacacgtacgtgcgtgcaggcgtggcgggcaacggcgcgacgttctacttcctggtgttcgccatcctggccggggtggtgggcgcggcgtccaagctggcgggcgtccaccacgtgcgcgcgtggcgccacgacagcctcgccaccaacgcggcctcctccctcatcgcgtgggccatcaccgcgctcgccttcggcctcgcctgcaaggagatccacatcggcggccaccgcgggtggcgcctccgcgtgctcgaggctttcgtcatcatcctcgccttcacgcagctgctctacgtgctcatgctccacacgggcctcttcggtggcggcgacggcgcctaccgggaccacgactacggcgttggcgccggtgctgccgccggcgagcccaaggggacagcgagggtctgatcgatgatctccccgacacggggtcacgcaagaataaacgataatacatacttgatggtcattttgtgtgtgtgacagtgtgactgtgaggctctgcctctgtgtgcagcagtgcagtgtaagctctgtgctctcgcctttaattacactactagttgtttagcgttgtgtgttgggtttgtgtagcttgtacatgtgtgtatgtgaccgtacctagtacgtactttgatcgtagtagctaggtgtgcacgtcatggcctgtattttgctcgcatggaagtgccgtcctcaattaattactccttgtcaccg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066020.1 RefSeq:Os07g0422100]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 08:38, 12 June 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here. Os07g0422100 whose expression is induced by drought stress, was identified using drought-treated rice plants at the flowering stage, and was found expressing specifically in rice panicle after drought treatment. Os07g0422100 might contain a drought-inducible promoter which makes the gene specifically express in drought stressed rice panicle. When the reporter gene GUS was driven by the promoter of Os07g0422100, the reporter gene can be efficiently induced after drought treatment, therefore affording a method to assess the degree of drought stress.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information