Difference between revisions of "Os12g0111500"

From RiceWiki
Jump to: navigation, search
 
(2 intermediate revisions by 2 users not shown)
Line 10: Line 10:
 
===Evolution===
 
===Evolution===
 
Please input evolution information here.
 
Please input evolution information here.
F-box proteins comprise one of the large protein families in
+
 
plants. There are more than 692 and 779 F-box genes in the
 
A. thaliana and rice genomes, respectively (Xu et al., 2009).
 
Previous studies demonstrated that F-box proteins are involved
 
in the regulation of several biological processes, including circadian
 
clock, self-incompatibility, photomorphogenesis, floral
 
meristem, phytohormonal signalling, and responses to abiotic
 
stresses (Sullivan et al., 2003; Moon et al., 2004; Ni et al.,
 
2004; Smalle and Vierstra, 2004; Dreher and Callis, 2007). For
 
instance, the F-box protein TIR1/AFB can bind to the transcriptional
 
repressor protein Aux/IAA, thus promoting their proteasomal
 
degradation and activating auxin-induced transcription
 
(Dharmasiri et al., 2005; Tan et al., 2007). The involvement of
 
F-box proteins in response to both biotic and abiotic stresses has
 
also been reported.
 
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
Line 34: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
 
GeneName = Os12g0111500|
 
Description = BTB domain containing protein|
 
Version = NM_001072500.1 GI:115486961 GeneID:4351297|
 
Length = 1837 bp|
 
Definition = Oryza sativa Japonica Group Os12g0111500, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
 
AP = Chromosome 12:601666..603502|
 
CDS = 601796..602257,602353..602529,603210..603398|
 
GCID = <gbrowseImage1>
 
name=NC_008405:601666..603502
 
source=RiceChromosome12
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008405:601666..603502
 
source=RiceChromosome12
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaaccaagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccagcaaggcttcgcggcggcgtggaaagacggcatccacaccgacatcgccgtcaggcctggaactgggcccccaatccaagcccataaggccatccttgcgaccaggtcggaggtgttccgccacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcacggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcgtgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctcaaggagcgcgccatgggggcggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctttgcgtccagatcacccgcgctctgcttgccaataaagcatttcccgccaagacgccttaa</cdnaseq>|
 
AA = <aaseq>MDCCVCSPMASMYRLPRNAICAACYEGAKAIIAFFNDDDDEHAD                    ADQGSVKPSRLTKLNSTTKGLRDAWEEVKQMRCREEETKQRASFLQQGFAAAWKDGIH                    TDIAVRPGTGPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHL                    LAFLYTGSLATCTEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAE                    LSSSAALKERAMGAVVEHAEEVVFSPEYEEFAVRNAALCVQITRALLANKAFPAKTP</aaseq>|
 
DNA = <dnaseqindica>1246..1707#974..1150#105..293#aatgctagcgttgctgttcacgtcgttgccaagccacaaggagaaggaagaaggaagagaaggcagaaggaagcagcaggagaaggagaaggccagaagaaacaatggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaaccaaggtaagaccttcccatatctcattttgctcctttattaattagtcctttaggattggtatgactatgttcggtttacaaccatctcgattgtgccgtgtgctctacttccatgaaaaatctagccttgcgtgtttctagattctagaagcagagaaatttcggtagagaatgaattgataaaaaggaattccatctcacatgtaatgcaatataaactcttgttgcattggttacatcattcagtttcattgacgcatgcgtcaggtttgctgtcaacgttgtgttggttaatggtgaggagcaagtctcaatcgagagttgcatgagaatgataggtttggtggaaatctcattgtcaaaaggttcatgattgatcgatgcttaaagaccgttttcagaagctgtattttatatactagtgtgcttcaacagctgatgttatctttttattaaaaaaccaaaccggcatgacatacacaagattctccttgattgcaatagctggaatgaggaaataaaggtgcatgccttggacaagttgttatgctaatcttcagaaagaattaattctgaacagtcacagattaatgctaattggtgggggtgcatgggacatacatactacacttatcagcatcatagtgctaactgctaacatttgtgcgtgttactcaatgtagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccagcaaggcttcgcggcggcgtggaaagacggcatccacaccgacatcgccgtcaggcctggaactgggcccccaatccaagcccataaggccatccttgtcagtctctctctctctcagtttcagcccaataggccggccttcttttagtttgattgggcccaatgaaactaattaggcccagctatatacaggcgaccaggtcggaggtgttccgccacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcacggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcgtgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctcaaggagcgcgccatgggggcggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctttgcgtccagatcacccgcgctctgcttgccaataaagcatttcccgccaagacgccttaatatcccttttatttttcttcgtttagaatttagttagacgacgtacgatgtataagtgtaattaaatgatagtacatgcatatctctggaattaatgtgatcaatatatacaatttagattctttgcacg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001072500.1 RefSeq:Os12g0111500]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 09:15, 13 June 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information