Difference between revisions of "Os02g0649300"
(Created page with "{{JaponicaGene|
GeneName = Os02g0649300|
Description = Similar to Short highly repeated, interspersed DNA (Fragment)|
Version = NM_001054117.1 GI:115447604 GeneID:4330155|
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| − | + | The rice '''''Os02g0649300''''' was reported as '''''OsSLI1''''' in 2014 <ref name="ref1" /> by researchers from China. | |
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| − | + | ==Annotated Information== | |
| − | + | ===Gene Symbol=== | |
| − | + | *'''''Os02g0649300''''' '''''<=>''''' '''''OsSLI1''''' | |
| − | + | [[File:7-Os02g0649300-1.png|right|thumb|357px|'''Figure 6.''' ''Nuclear localization of OsSLI1-GFP fusion protein.<ref name="ref1" />.'']] | |
| − | + | ===Function=== | |
| − | + | * '''''OsSLI1''''' encodes member of the HD-Zip I subfamily | |
| − | + | * '''''OsSLI1''''' may be a transcriptional activator regulating stress-responsive gene expression and panicle development in rice. | |
| − | + | * It was found that OsSLI1 expression was enhanced in an ABI5-Like1 (ABL1) deficiency mutant abl1 under both normal and stress conditions, suggesting that ABL1 probably negatively regulates '''''OsSLI1''''' gene expression. | |
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| − | + | ===Expression=== | |
| − | + | * Quantitative RT-PCR result showed that in the seedlings, '''''OsSLI1''''' expression was mainly in root. | |
| − | + | * The root tissue accumulates 7 times of '''''OsSLI1''''' transcripts than in shoot tissue. | |
| − | + | * In panicles, the expression changes in different development stages, from relative low in 3 cm young panicles to a 33-fold increase in 8 cm panicles, and the 12 cm panicles still accumulate 8-fold OsSLI1 transcripts compared to 3 cm young panicles tissue. | |
| − | + | * Quantitative RT-PCR assay showed that OsSLI1 expression was highly induced by salt, PEG, H2O2 , high temperature, and ABA treatment but not by cold treatment. | |
| − | + | ===Subcellular Localization=== | |
| − | + | * '''''OsSLI1''''' is a nuclear-localized protein, in consistency with its potential function as a DNA binding transcription factor. | |
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| − | + | You can also add sub-section(s) at will. | |
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| − | + | ==Labs working on this gene== | |
| − | + | * State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China | |
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| − | [[Category:Genes]] | + | ==References== |
| − | + | <references> | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | * <ref name="ref1"> |
| − | [[Category:Japonica | + | Huang X, Duan M, Liao J, Yuan X, Chen H, Feng J, Huang J, Zhang HS. OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.). ScientificWorldJournal. 2014;2014:809353. doi: 10.1155/2014/809353. Epub 2014 Jun 25. PubMed PMID: 25089296; PubMed Central PMCID: PMC4095735. |
| − | + | </references> | |
| − | + | ||
| + | ==Structured Information== | ||
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] | ||
Latest revision as of 11:34, 3 October 2016
The rice Os02g0649300 was reported as OsSLI1 in 2014 [1] by researchers from China.
Contents
Annotated Information
Gene Symbol
- Os02g0649300 <=> OsSLI1
Figure 6. Nuclear localization of OsSLI1-GFP fusion protein.[1].
Function
- OsSLI1 encodes member of the HD-Zip I subfamily
- OsSLI1 may be a transcriptional activator regulating stress-responsive gene expression and panicle development in rice.
- It was found that OsSLI1 expression was enhanced in an ABI5-Like1 (ABL1) deficiency mutant abl1 under both normal and stress conditions, suggesting that ABL1 probably negatively regulates OsSLI1 gene expression.
Expression
- Quantitative RT-PCR result showed that in the seedlings, OsSLI1 expression was mainly in root.
- The root tissue accumulates 7 times of OsSLI1 transcripts than in shoot tissue.
- In panicles, the expression changes in different development stages, from relative low in 3 cm young panicles to a 33-fold increase in 8 cm panicles, and the 12 cm panicles still accumulate 8-fold OsSLI1 transcripts compared to 3 cm young panicles tissue.
- Quantitative RT-PCR assay showed that OsSLI1 expression was highly induced by salt, PEG, H2O2 , high temperature, and ABA treatment but not by cold treatment.
Subcellular Localization
- OsSLI1 is a nuclear-localized protein, in consistency with its potential function as a DNA binding transcription factor.
You can also add sub-section(s) at will.
Labs working on this gene
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
