Difference between revisions of "Os02g0649300"

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(Annotated Information)
 
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===Gene Symbol===
 
===Gene Symbol===
 
*'''''Os02g0649300''''' '''''<=>''''' '''''OsSLI1'''''
 
*'''''Os02g0649300''''' '''''<=>''''' '''''OsSLI1'''''
 
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[[File:7-Os02g0649300-1.png|right|thumb|357px|'''Figure 6.''' ''Nuclear localization of OsSLI1-GFP fusion protein.<ref name="ref1" />.'']]
 
===Function===
 
===Function===
 
* '''''OsSLI1''''' encodes member of the HD-Zip I subfamily
 
* '''''OsSLI1''''' encodes member of the HD-Zip I subfamily
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===Subcellular Localization===
 
===Subcellular Localization===
 
* '''''OsSLI1''''' is a nuclear-localized protein, in consistency with its potential function as a DNA binding transcription factor.
 
* '''''OsSLI1''''' is a nuclear-localized protein, in consistency with its potential function as a DNA binding transcription factor.
[[File:6-Os02g0649300-1.png|center|thumb|800px|'''Figure 3.''' ''Effects of OsEXPA3 downregulation on the root system architecture. (a) Primary root length of 1-wk-old seedlings. (b) Lateralroot density of 1-wk-old seedlings. Two independent transgenic lines (Line 1 and Line 3) were analyzed. The seeds were placed on half-strength Murashige and Skoog solid medium and grown for 7 d vertically in a growth chamber. Primary root length was determined using a ruler. All visible lateral roots that emerged from the primary root were counted. Values are the means of 20 biological replications
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± standard error. One independent plant was considered as one biological replication.<ref name="ref1" />.'']]
 
  
 
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Latest revision as of 11:34, 3 October 2016

The rice Os02g0649300 was reported as OsSLI1 in 2014 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os02g0649300 <=> OsSLI1
Figure 6. Nuclear localization of OsSLI1-GFP fusion protein.[1].

Function

  • OsSLI1 encodes member of the HD-Zip I subfamily
  • OsSLI1 may be a transcriptional activator regulating stress-responsive gene expression and panicle development in rice.
  • It was found that OsSLI1 expression was enhanced in an ABI5-Like1 (ABL1) deficiency mutant abl1 under both normal and stress conditions, suggesting that ABL1 probably negatively regulates OsSLI1 gene expression.

Expression

  • Quantitative RT-PCR result showed that in the seedlings, OsSLI1 expression was mainly in root.
  • The root tissue accumulates 7 times of OsSLI1 transcripts than in shoot tissue.
  • In panicles, the expression changes in different development stages, from relative low in 3 cm young panicles to a 33-fold increase in 8 cm panicles, and the 12 cm panicles still accumulate 8-fold OsSLI1 transcripts compared to 3 cm young panicles tissue.
  • Quantitative RT-PCR assay showed that OsSLI1 expression was highly induced by salt, PEG, H2O2 , high temperature, and ABA treatment but not by cold treatment.

Subcellular Localization

  • OsSLI1 is a nuclear-localized protein, in consistency with its potential function as a DNA binding transcription factor.


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Labs working on this gene

  • State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China

References

  1. 1.0 1.1 Cite error: Invalid <ref> tag; no text was provided for refs named ref1

Structured Information