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| − | {{JaponicaGene|
| + | The rice '''''Os06g0147800''''' was reported as '''''OsMKK1''''' in 2014 <ref name="ref1" /> by researchers from China. |
| − | GeneName = Os06g0147800|
| |
| − | Description = Similar to Mitogen-activated protein kinase kinase 2|
| |
| − | Version = NM_001063341.1 GI:115466413 GeneID:4340126|
| |
| − | Length = 4025 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os06g0147800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os06g0147800''''' '''<=>''' '''''OsMKK1''''','''''MKK1''''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ===Function=== |
| − | |
| + | * '''''OsMKK1''''' was markedly increased by salt stress. |
| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
| + | * OsMKK1-knockout (osmkk1) mutant was more sensitive to salt stress than the wild type. |
| − | AP = Chromosome 6:2497864..2501888|
| + | * '''''OsMKK1''''' constitute a signaling pathway that regulates salt stress tolerance in rice. |
| − | CDS = 2498219..2498241,2498372..2498465,2498568..2498613,2499668..2499873,2499979..2500160<br>,2500268..2500493,2500691..2500828,2501491..2501575,2501719..2501777<br>|
| + | |
| − | GCID = <gbrowseImage1>
| + | ===Expression=== |
| − | name=NC_008399:2497864..2501888
| + | * To determine the transcript profile of the rice MPKKs gene in response to salt stress, the relative mRNA level of seven MPKK family genes were analyzed using qRT-PCR over an 8-h period salt treatment. |
| − | source=RiceChromosome06
| + | * In 2-week-old seedlings, the transcript of six out of seven OsMKKs (except OsMMK10-1) responded to salt stress. The most pronounced and fast effect was observed in case of '''''OsMKK1''''' gene which increased more than 6-fold after 1 h and then graduallydecreased to around 3-fold after 4 h of 200 mM NaCl treatment. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | |
| − | GSID = <gbrowseImage2>
| + | [[File:8-Os06g0147800.png|center|thumb|800px|'''Figure 1.''' ''Expression analysis of OsMKKs family under salt stress conditions.<ref name="ref1" />.'']] |
| − | name=NC_008399:2497864..2501888
| + | |
| − | source=RiceChromosome06
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atggggaagccggggaagctagcgctgccctcgcacgagtcaaccatcggcaaattcctgacgcagagcgggacgttcaaggacggcgatctgctcgtcaacaaggacggcctccgcatcgtctcgcagagcgaggaaggggaggcccctcctatagaacctttagatcataatcagttgagtctagatgatctagacgcaatcaaagttatcggtaaaggtagtagtggaatcgtgcagttggttcgccacaaatggactggccagttttttgctctgaaggtaatacaactcaatatccaggagaatatacgcagacagattgcgcaggaattgaaaatcagcttgtcaacacagtgccaatatgttgttgcatgctgtcagtgtttttacgttaatggtgtcatttcaattgttttggagtatatggacagtggctctctctcagatttcctgaagacagttaaaaccattccagagccctaccttgctgcaatctgtaagcaggtgctaaaaggactgatgtacttacatcatgagaagcacatcatacaccgagatctgaagccgtcaaatatattaataaatcatatgggtgaagtaaaaatatccgactttggtgttagtgccatcattgctagttcctcggcacaacgagatacatttactgggacatataactacatggcgccagaaagaatcagtgggcaaaaacatggttatatgagtgatatctggagcttgggcctcgttatgctagaattggccactggtgaatttccatatcctcctcgtgaaagcttttatgaactccttgaagctgttgtcgaccacccaccaccttctgctccatcagaccagttttcagaggaattctgttcattcgtctctgcatgtatccaaaagaatgcttcggataggtcatctgcacaaatcttattaaatcatccattcctgagcatgtatgacgacctgaatatagatcttgcttcgtacttcacaaccgatggatctccgcttgccaccttcaatacaagcaaccgatatgatgacagatag</cdnaseq>|
| + | * College of Life Sciences, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, PR China |
| − | AA = <aaseq>MGKPGKLALPSHESTIGKFLTQSGTFKDGDLLVNKDGLRIVSQS EEGEAPPIEPLDHNQLSLDDLDAIKVIGKGSSGIVQLVRHKWTGQFFALKVIQLNIQE NIRRQIAQELKISLSTQCQYVVACCQCFYVNGVISIVLEYMDSGSLSDFLKTVKTIPE PYLAAICKQVLKGLMYLHHEKHIIHRDLKPSNILINHMGEVKISDFGVSAIIASSSAQ RDTFTGTYNYMAPERISGQKHGYMSDIWSLGLVMLELATGEFPYPPRESFYELLEAVV DHPPPSAPSDQFSEEFCSFVSACIQKNASDRSSAQILLNHPFLSMYDDLNIDLASYFT TDGSPLATFNTSNRYDDR</aaseq>|
| + | |
| − | DNA = <dnaseqindica>3648..3670#3424..3517#3276..3321#2016..2221#1729..1910#1396..1621#1061..1198#314..398#112..170#gtctccatttcgcgtctcctcctcctcctcctccggccatctcaccctcccggcgagcagcgagcgggaggcctccgccaccgccgccgccgccgccgccgtcgccgcccgatggggaagccggggaagctagcgctgccctcgcacgagtcaaccatcggcaaattcctgtgatctcccgttccccccatctctctctctcccgcttttccgtgtcctctgctgctcgcatcacgcttgctgttgttgttggatgtgtgttgcttgtgctgattccggtggtgtttcgggggtttgggttttcgggctgcaggacgcagagcgggacgttcaaggacggcgatctgctcgtcaacaaggacggcctccgcatcgtctcgcagagcgaggaaggggaggtaaagtcaccagcggaaatgatatagtttcacctgtttggtattccgtttggcaatcgtaggagtgaactcgccatggttggatcttctcttgggttttgttgaggagatgaaggtgtgaattggatgatgggcgggtcgctagcggcgttcctggattcactctggagtgaattgttgttgagctctgattatattctggattggaatgtcatgcgtttggcaatcagggtgctgtttgcctgtttggtaatagggcagatgcatacgctaattttctacattaaaatgtgccaataatttgcaaccatttttatatggtagtgaagaaatcctgaaatagtttaattcacattttctaatccacagcgaactaggataggaaacagcatgcctttttatcttcattgtttcgatgagcgtcatacttatatagtggtttctcatgtggagtgtctagacactaactagtggtatctgcatatgcaataaattactgaaagcatatatgctgcatctggtagctctgttcctggtgctcacttatagtgtgagaatgttctttaatactatcattactttttgtactctccattcatttaatatgttcttttattttgtgtactcaccttctctctattggcatgctaaaattgttgcaggcccctcctatagaacctttagatcataatcagttgagtctagatgatctagacgcaatcaaagttatcggtaaaggtagtagtggaatcgtgcagttggttcgccacaaatggactggccagttttttgctctgaaggtattatatgaaagtacattctttgctttttatgatttcttccactctccccttaccagttttaactacaatctttttagtgttcccaatagttatagcttcatgtgagtccagtgttttttcatgtggtcttttgcctaacacttgcaaaggatctttagttctttacctccattgatatattattgcgtttacaggtaatacaactcaatatccaggagaatatacgcagacagattgcgcaggaattgaaaatcagcttgtcaacacagtgccaatatgttgttgcatgctgtcagtgtttttacgttaatggtgtcatttcaattgttttggagtatatggacagtggctctctctcagatttcctgaagacagttaaaaccattccagagccctaccttgctgcaatctgtaagcaggccagtgacatgtggtagaagctatcacacaatttctttgctttgcaaatgttacttaagcaccacatggactttataataaaaataaataaatctttcctgcgcaggtgctaaaaggactgatgtacttacatcatgagaagcacatcatacaccgagatctgaagccgtcaaatatattaataaatcatatgggtgaagtaaaaatatccgactttggtgttagtgccatcattgctagttcctcggcacaacgagatacatttactgggacatataactacatggcggtgcgtaaaagtttctgtgtcatgaaatgtatctctgattattgcatgaaatgctatctattttgtttgtcttgttgaaccaaagggaaattctgttcttgacagccagaaagaatcagtgggcaaaaacatggttatatgagtgatatctggagcttgggcctcgttatgctagaattggccactggtgaatttccatatcctcctcgtgaaagcttttatgaactccttgaagctgttgtcgaccacccaccaccttctgctccatcagaccagttttcagaggaattctgttcattcgtctctgcatggtaattgtacttctttgatgatttctcttatccacttacatttgcagtactagcaatttgttttaatttttagtttacaatcacgtgcttctaatatcccaagttggtgcctgttttatacattttacatgcaaaatttaagtgaaaaggtgactaccttcagagtgtgtttggtaccctgtatgtcattcagcctggcttgcatcagcagagcttgcccaaccagtcctgtgtagatgctgaaaattgacaagtttagttacatgcttttgcttagctaggccatgtagggagtttgtttggtttacagcatgtatacgtgcaaagcccaaaatatatctttggagccagtgcatgccagcaatttcgtgctctcaccagcaggccagcaggaaacggattctgaatacggaaaacgtttctatggggccatgcccatacctcactttggaatgcgcagggattggcccatccaatcacacagaaaaccaaacattggaactgttccagggaacaaatgcccccttactgccttggtatgcagattgtagggacccaattgatgcatggcgggattacacccaactaaatcatttattgtgtggcgtgttccatactccctccatacttataaaggaagtcgtttaggacaatatttaagtcaaaccttgagaatataaatcgtgaataactctcaagttgttgagtttgaaaatataaaaattatatgtatagatttgtcttgaaaaatactttcataaaagtatgcatatatcactttttaataaatatttttatagaaataagaagtcaaatttgtgttttggagaccgtgttgctttcctaaacgactttctttacgagtatggagggagtacttcttttcttgagatatttttgttactcttacatgtgaaccaaataggtctaatgtctttcaactcttcatattcatatggactttcaatgttaagaaggctgctaagttttataaagggaaataaataaataaacagggctaatacagttcctctgtctgttctgtgggttgcagtatccaaaagaatgcttcggataggtcatctgcacaaatcttattagtaagtgaaaattcttatccacgctgttctttttaaggcatcttttgcacaagtctagctcactgatcttgttgcgtcctccctctgctctttgatacccagaatcatccattcctgagcatgtatgacgacctgaatatagatcttgcttcgtacttcacaaccgatggatctccgcttgccaccttcaatacaagtaatgatgagcaacttgtcttttttctttgtttttgccatccattttgtcatagacacatgttagtgccattctttatgattccagtggatgaaccatcaagggaaccttacattcttttttttcgtaggcaaccgatatgatgacagatagtctgatgcaacactgcgtcatcatctagctcgaaggatgatcctttggctgtccatctgtagaatctaccatctacctaactggccccaaatgtttcgtgtattttttgggagaaaactttgccctgtgtactgagctgggattgatgtctttgatatgtaaatttcgcgtaatttcatatgtagaacaattctaggatcattgggcattgaagttttgtttggccgtgcaccaggatgatctgttcttgatcgctttacctttgtttctcacttctgtaactaaaacctatatttaccatttaccggattgttcatggcctcttctgggcaagtcggtgtcgactgaaagtctc</dnaseqindica>|
| + | ==References== |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063341.1 RefSeq:Os06g0147800]|
| + | <references> |
| − | }}
| + | * <ref name="ref1"> |
| − | [[Category:Genes]] | + | Wang F, Jing W, Zhang W. The mitogen-activated protein kinase cascade MKK1-MPK4 mediates salt signaling in rice. Plant Sci. 2014 Oct;227:181-9. doi: 10.1016/j.plantsci.2014.08.007. Epub 2014 Aug 23. PubMed PMID: 25219319. |
| − | [[Category:Japonica mRNA]]
| + | </ref> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | </references> |
| − | [[Category:Japonica Genes]] | + | |
| − | [[Category:Japonica Chromosome 6]]
| + | |
| − | [[Category:Chromosome 6]]
| + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
