Difference between revisions of "Os03g0693700"

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Please input one-sentence summary here.
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The rice '''''Os03g0693700''''' was reported as '''''Osoxo4''''' in 2013 <ref name="ref1" /> by researchers from India and the USA.  
  
 
==Annotated Information==
 
==Annotated Information==
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===Function===
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===Gene Symbol===
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Please input function information here.
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*'''''Os03g0693700''''' '''<=>''' '''''Osoxo4,oxo4'''''
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===Phenotypic analysis===
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* Overexpression of the '''''Osoxo4''''' gene in transgenic plants showed higher enzyme activity of oxalate oxidase (OxO) than nontransgenic control plants, which was visualized by histochemical assays and sodium dodecylsulphate-polyacrylamide gel electrophoresis (SDS-PAGE).
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* Transgenic rice leaves were more tolerant than control rice leaves to exogenous OA. Transgenic plants showed a higher level of expression of other defence-related genes in response to pathogen infection.
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* More importantly, transgenic plants exhibited significantly enhanced durable resistance to R. solani. The overexpression of Osoxo4 in rice did not show any detrimental phenotypic or agronomic effect.
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* The transgenic Osoxo4-overexpressing rice lines and nontrans-genic control plants were subjected to bioassay with a virulent Hyderabad isolate of R. solani AG1-1A. The transgenic lines showed an increased level of sheath blight resistance, as demon- strated by a low sheath blight score in comparison with nontransgenic control plants.
  
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===Expression===
 
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Please input expression information here.
 
  
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===Evolution===
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[[File:26-Os03g0693700.png|center|thumb|720px|'''Figure 7.''' ''Overexpression of rice oxalate oxidase 4 (Osoxo4) enhances resistance against the sheath blight pathogen Rhizoctonia solani<ref name="ref1" />.'']]
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Please input evolution information here.
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You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
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Please input related labs here.
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* Plant Molecular Biology and Biotechnology Laboratory, Department of Botany, University of Calcutta, 35, Ballygunge Circular Road, Kolkata 700019, India
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* Center for Diabetes Research, The Methodist Hospital Research Institute, 6670 Bertner, Houston, TX 77030, USA
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* Division of Crop Science, Indian Council of Agricultural Research (ICAR), Krishi Bhavan, Dr. Rajendra Prasad Road, New Delhi 110001, India
 
==References==
 
==References==
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Please input cited references here.
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<references>
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* <ref name="ref1">
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Molla KA, Karmakar S, Chanda PK, Ghosh S, Sarkar SN, Datta SK, Datta K. Rice
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oxalate oxidase gene driven by green tissue-specific promoter increases tolerance
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to sheath blight pathogen (Rhizoctonia solani) in transgenic rice. Mol Plant
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Pathol. 2013 Dec;14(9):910-22. doi: 10.1111/mpp.12055. Epub 2013 Jul 1. PubMed
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PMID: 23809026.
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</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
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GeneName = Os03g0693700|
 
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Description = Similar to Oxalate oxidase 1 (EC 1.2.3.4) (Germin)|
 
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Version = NM_001057500.1 GI:115454728 GeneID:4333791|
 
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Length = 997 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0693700, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
 
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AP = Chromosome 3:28539529..28540525|
 
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CDS = 28539717..28540400|
 
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GCID = <gbrowseImage1>
 
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name=NC_008396:28539529..28540525
 
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source=RiceChromosome03
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008396:28539529..28540525
 
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source=RiceChromosome03
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggagtgcttcaaaactaccctagctggggtggtgctcgtcgtgctgctcctgcagcaggcgccggtgctacgggccaacgaccctgaccctctccaagacttctgcgtcgccgacctcgacagcgaggtgacgttgaacgggtacccgtgcaagcccacgccggcggccggcgacgagttcctcttctcctccaggttagccacgggcggcgacgtgaacgccaaccccaacggctccaacgtcacgcagctcgacgtcgcggggtggcccggggtgaacacgctcggcgtgtccatgaaccgcatcgacttcgcgcccggcggcaccaacccgccgcacgtccacccgcgcgccaccgaggtcggcatcgtgctacgcggcgagctcctcgtcggcatcatcggcagcctcgacaccgggaacaggtactactccagggtggtccgcggcggcgagacgttcgtcatcccgcgggggctcatgcacttccagttcaacgtcggcaagacggaggccaccatggtggtgtccttcaacagccagaaccctggcatcgtcttcgtcccgctcacattgttcggctccaacccacccatcccgacgccggtgctcgtcaaggcgctccgggtggacgccggcgtcgtcgagctgcttaagtccaagttcaccggtgggtactga</cdnaseq>|
 
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AA = <aaseq>MECFKTTLAGVVLVVLLLQQAPVLRANDPDPLQDFCVADLDSEV                    TLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNR                    IDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRG                    LMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVEL                    LKSKFTGGY</aaseq>|
 
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DNA = <dnaseqindica>126..809#acccaattagcaaagtagcttctatactactgcctctgccaggtgccatttcattactcaaagaaattgagccgagacctgaggaacatatacaagaattggctagctttgctcgttgattagcaatggagtgcttcaaaactaccctagctggggtggtgctcgtcgtgctgctcctgcagcaggcgccggtgctacgggccaacgaccctgaccctctccaagacttctgcgtcgccgacctcgacagcgaggtgacgttgaacgggtacccgtgcaagcccacgccggcggccggcgacgagttcctcttctcctccaggttagccacgggcggcgacgtgaacgccaaccccaacggctccaacgtcacgcagctcgacgtcgcggggtggcccggggtgaacacgctcggcgtgtccatgaaccgcatcgacttcgcgcccggcggcaccaacccgccgcacgtccacccgcgcgccaccgaggtcggcatcgtgctacgcggcgagctcctcgtcggcatcatcggcagcctcgacaccgggaacaggtactactccagggtggtccgcggcggcgagacgttcgtcatcccgcgggggctcatgcacttccagttcaacgtcggcaagacggaggccaccatggtggtgtccttcaacagccagaaccctggcatcgtcttcgtcccgctcacattgttcggctccaacccacccatcccgacgccggtgctcgtcaaggcgctccgggtggacgccggcgtcgtcgagctgcttaagtccaagttcaccggtgggtactgatctgacgatccgagagtattcttacgcggatctaggtctctgctactatagttgtgcgcagtgtatgttatttgattgaataaacttgtcgtcgccatcgcaggccacgaatgaaactaaaatgtattactactgctttcttgtgcttttccccttctaaataaactatacataaatggtattttggt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057500.1 RefSeq:Os03g0693700]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 3]]
 
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[[Category:Chromosome 3]]
 

Latest revision as of 09:02, 9 October 2016

The rice Os03g0693700 was reported as Osoxo4 in 2013 [1] by researchers from India and the USA.

Annotated Information

Gene Symbol

  • Os03g0693700 <=> Osoxo4,oxo4

Phenotypic analysis

  • Overexpression of the Osoxo4 gene in transgenic plants showed higher enzyme activity of oxalate oxidase (OxO) than nontransgenic control plants, which was visualized by histochemical assays and sodium dodecylsulphate-polyacrylamide gel electrophoresis (SDS-PAGE).
  • Transgenic rice leaves were more tolerant than control rice leaves to exogenous OA. Transgenic plants showed a higher level of expression of other defence-related genes in response to pathogen infection.
  • More importantly, transgenic plants exhibited significantly enhanced durable resistance to R. solani. The overexpression of Osoxo4 in rice did not show any detrimental phenotypic or agronomic effect.
  • The transgenic Osoxo4-overexpressing rice lines and nontrans-genic control plants were subjected to bioassay with a virulent Hyderabad isolate of R. solani AG1-1A. The transgenic lines showed an increased level of sheath blight resistance, as demon- strated by a low sheath blight score in comparison with nontransgenic control plants.


Figure 7. Overexpression of rice oxalate oxidase 4 (Osoxo4) enhances resistance against the sheath blight pathogen Rhizoctonia solani[1].


You can also add sub-section(s) at will.

Labs working on this gene

  • Plant Molecular Biology and Biotechnology Laboratory, Department of Botany, University of Calcutta, 35, Ballygunge Circular Road, Kolkata 700019, India
  • Center for Diabetes Research, The Methodist Hospital Research Institute, 6670 Bertner, Houston, TX 77030, USA
  • Division of Crop Science, Indian Council of Agricultural Research (ICAR), Krishi Bhavan, Dr. Rajendra Prasad Road, New Delhi 110001, India

References

  1. ↑ 1.0 1.1 Molla KA, Karmakar S, Chanda PK, Ghosh S, Sarkar SN, Datta SK, Datta K. Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice. Mol Plant Pathol. 2013 Dec;14(9):910-22. doi: 10.1111/mpp.12055. Epub 2013 Jul 1. PubMed PMID: 23809026.

Structured Information