Difference between revisions of "Os04g0611800"
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| − | + | The rice gene Os04g0611800 was reported as '''''osks1''''' in 2004<ref name="ref1" /> by researchers from Japan. | |
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==Annotated Information== | ==Annotated Information== | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os04g0611800 <=> OsKS1, KS1, KS1A, KSL1, OsKSL1, OsKS1A, OsKS1B, OsKS1C, Ks1, Os KS1, OsTPS26 | ||
===Function=== | ===Function=== | ||
| − | + | * '''''OsKS1''''' encodes KS protein which is the major enzymes involved in the early steps of GA biosynthesis. | |
| − | + | * Although several CPS-like and KS-like genes were identified in rice, GA biosynthesis depends on only '''''OsCPS1''''' and '''''OsKS1'''''. | |
===Expression=== | ===Expression=== | ||
| − | + | * '''''OsKS1''''' was broadly expressed in all the organs of wild-type rice that the researchers tested, including vegetative shoot apices, leaf sheaths, leaf blades, elongating stems, roots, immature panicles, and panicles at flowering time, whereas the levels of OsKS1 in roots was lower than those in other organs. | |
===Evolution=== | ===Evolution=== | ||
| − | + | [[File:Os04g0611800-1.png|right|thumb|200px|'''Figure 3. GA metabolic Cyt P450-dependent monooxygenases KO and KAO''' '' <ref name="ref1" />.'']] | |
| + | * OsKS1 showed highest similarity to Arabidopsis AtKS/GA2 (43% identity), whereas the other OsKS proteins showed between 37% and 41% identities with the Arabidopsis protein. OsKS1-4 and OsKS7 were more closely related to maize (Zea mays) ZmKS (49%–54% identities), whereas OsKS5, OsKS6, and OsKS8 constituted another group (39%–43% identities with ZmKS; Fig. 3). | ||
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
Latest revision as of 11:36, 9 October 2016
The rice gene Os04g0611800 was reported as osks1 in 2004[1] by researchers from Japan.
Contents
Annotated Information
Gene Symbol
- Os04g0611800 <=> OsKS1, KS1, KS1A, KSL1, OsKSL1, OsKS1A, OsKS1B, OsKS1C, Ks1, Os KS1, OsTPS26
Function
- OsKS1 encodes KS protein which is the major enzymes involved in the early steps of GA biosynthesis.
- Although several CPS-like and KS-like genes were identified in rice, GA biosynthesis depends on only OsCPS1 and OsKS1.
Expression
- OsKS1 was broadly expressed in all the organs of wild-type rice that the researchers tested, including vegetative shoot apices, leaf sheaths, leaf blades, elongating stems, roots, immature panicles, and panicles at flowering time, whereas the levels of OsKS1 in roots was lower than those in other organs.
Evolution
Figure 3. GA metabolic Cyt P450-dependent monooxygenases KO and KAO [1].
- OsKS1 showed highest similarity to Arabidopsis AtKS/GA2 (43% identity), whereas the other OsKS proteins showed between 37% and 41% identities with the Arabidopsis protein. OsKS1-4 and OsKS7 were more closely related to maize (Zea mays) ZmKS (49%–54% identities), whereas OsKS5, OsKS6, and OsKS8 constituted another group (39%–43% identities with ZmKS; Fig. 3).
You can also add sub-section(s) at will.
Labs working on this gene
- Field Production Science Center, University of Tokyo, Nishi-Tokyo, Tokyo 188–0002, Japan (T.S.);
- Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi 464–8601, Japan (K.M., H.I., T.T., M.U.-T., H.K., M.A., M.M.);
- BioResource Center, RIKEN Tsukuba Institute, Tsukuba, Ibaraki 305–0074, Japan (K.I., M.K.);
- Molecular Genetics Department, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305–8602, Japan (G.K.A., S.T., K.A., A.M., H.H.)
References
- ↑ 1.0 1.1 Sakamoto T, Miura K, Itoh H, Tatsumi T, Ueguchi-Tanaka M, Ishiyama K, Kobayashi M, Agrawal GK, Takeda S, Abe K, Miyao A, Hirochika H, Kitano H, Ashikari M, Matsuoka M. An overview of gibberellin metabolism enzyme genes and their related mutants in rice. Plant Physiol. 2004 Apr;134(4):1642-53. Epub 2004 Apr 9. Erratum in: Plant Physiol.2004 Jul;135(3):1863. PubMed PMID: 15075394; PubMed Central PMCID: PMC419838.
