Difference between revisions of "Os01g0248900"

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(Created page with "{{JaponicaGene| GeneName = Os01g0248900| Description = Similar to Expansin Os-EXPA3| Version = NM_001049122.1 GI:115435657 GeneID:4327217| Length = 1014 bp| Definition = ...")
 
m (Annotated Information)
 
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{{JaponicaGene|
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The rice '''''Os01g0248900''''' was reported as '''''OsEXPA8''''' in 2013 <ref name="ref1" /> by researchers from Korea, Mongolia, Russia.
GeneName = Os01g0248900|
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Description = Similar to Expansin Os-EXPA3|
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==Annotated Information==
Version = NM_001049122.1 GI:115435657 GeneID:4327217|
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[[File:28-Os01g0248900.png|right|thumb|327px|'''Figure 3.''' ''Morphological changes in 35S :: OsEXPA8 transgenic lines.<ref name="ref1" />.'']]
Length = 1014 bp|
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===Gene Symbol===
Definition = Oryza sativa Japonica Group Os01g0248900, complete gene.|
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*'''''Os01g0248900''''' '''<=>''' '''''OsEXPA8,EXPA8'''''
Source = Oryza sativa Japonica Group
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===Function===
 +
* Accumulation of '''''OsEXPA8''''' in Cell Wall Enlarges Cell Size.
 +
* The Growth of Suspension-cultured Cells is Significantly Increased by '''''OsEXPA8''''' Overexpression
 +
* Overexpression of '''''OsEXPA8''''', Improves Rice Growth and Root System Architecture by Facilitating Cell Extension
 +
 
 +
===Phenotypic analysis===
 +
* Overexpression of '''''OsEXPA8''''' yielded pleiotropic phenotypes in the root system architecture (Figure 3A–F), plant height, leaf number and leaf size (Figure 3G and H).
 +
* Compared to wild-type plants, 35S::OsEXPA8 transgenic lines showed similar morphological phenotypes: the length of primary roots (Figure 3A) and number of lateral roots were significantly increased (t-test, P,0.01).
 +
* The size of root hairs in the root apex of 35S::OsEXPA8 plants has been increased clearly by stereoscope (Figure 3B and C) and Cryo-SEM images (Figure 3D and E). At maturity, the difference of the root system architecture between transgenic lines and wild-type plants was also significant, and transgenic lines developed more and longer roots (including lateral and adventurous roots) (Figure 3F).
 +
 
 +
You can also add sub-section(s) at will.
 +
 
 +
==Labs working on this gene==
 +
* Bioengineering College, Chongqing University, Chongqing, China
 +
 
 +
==References==
 +
<references>
 +
* <ref name="ref1">
 +
Ma N, Wang Y, Qiu S, Kang Z, Che S, Wang G, Huang J. Overexpression of
 +
OsEXPA8, a root-specific gene, improves rice growth and root system architecture
 +
by facilitating cell extension. PLoS One. 2013 Oct 4;8(10):e75997. doi:
 +
10.1371/journal.pone.0075997. eCollection 2013. PubMed PMID: 24124527;
 +
</ref>
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</references>
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==Structured Information==
  
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:8195063..8196076|
 
CDS = 8195191..8195819,8195941..8196067|
 
GCID = <gbrowseImage1>
 
name=NC_008394:8195063..8196076
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:8195063..8196076
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcggccgccagaatgctcgtgctcctggcctctctctgcgctctcctgctcacggcgtccgcggccaaatggactcctgccttcgcgacgttctacggcggcagcgacgcctccggcaccatgggcggcgcatgcgggtacggcgacctgtacggcgccgggtacgggacgcggacggcggcgctgagcacggcgctgttcaacggcggcgcgtcgtgcggcgcctgcttcaccatcgcctgcgacacccgcaagacgcagtggtgcaagccggggacgtccatcaccgtgacggcgaccaacttctgccctccaaactacgccctgtccggcgacgccggcgggtggtgcaacccgccgcgccgccacttcgacatgtcgcagccggcgtgggagacgatcgcggtgtaccgcgccgggatcgtgcccgtgaactaccgccgcgtgccgtgccagcggagcggcggcatccggttcgccgtgaacgggcacagctacttcgagctggtgctggtgacgaacgtcggcggcagcggcgcggtggcgcagatgtggatcaaggggtccgggacggggtggatggcgatgagccgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttccgggtgcaggccgacgacggccgcgtcgtcacggcggccgacgtcgcgccggcggggtggtcgttcggcgccacctacacctcctcggctcagttctactga</cdnaseq>|
 
AA = <aaseq>MAAARMLVLLASLCALLLTASAAKWTPAFATFYGGSDASGTMGG                    ACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATN                    FCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRF                    AVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSF                    RVQADDGRVVTAADVAPAGWSFGATYTSSAQFY</aaseq>|
 
DNA = <dnaseqindica>258..886#10..136#gacgcgacaatggcggccgccagaatgctcgtgctcctggcctctctctgcgctctcctgctcacggcgtccgcggccaaatggactcctgccttcgcgacgttctacggcggcagcgacgcctccggcaccatgggttagtagcaaattaagctcagctaatcaccatgcatgtgttaattaatcttttgcaaagtttaattggcatttacaataatggagtttggtctctctctcgtctcgtgtgtgatatccaggcggcgcatgcgggtacggcgacctgtacggcgccgggtacgggacgcggacggcggcgctgagcacggcgctgttcaacggcggcgcgtcgtgcggcgcctgcttcaccatcgcctgcgacacccgcaagacgcagtggtgcaagccggggacgtccatcaccgtgacggcgaccaacttctgccctccaaactacgccctgtccggcgacgccggcgggtggtgcaacccgccgcgccgccacttcgacatgtcgcagccggcgtgggagacgatcgcggtgtaccgcgccgggatcgtgcccgtgaactaccgccgcgtgccgtgccagcggagcggcggcatccggttcgccgtgaacgggcacagctacttcgagctggtgctggtgacgaacgtcggcggcagcggcgcggtggcgcagatgtggatcaaggggtccgggacggggtggatggcgatgagccgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttccgggtgcaggccgacgacggccgcgtcgtcacggcggccgacgtcgcgccggcggggtggtcgttcggcgccacctacacctcctcggctcagttctactgatgagcattaattgcaagcctatctcatttaattaatctggaccgttcgatgtagtatattgtatgctttgatcgacgtggcataggatggaagaggccgcccacgaagaaaatttgggacttgtgtat</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049122.1 RefSeq:Os01g0248900]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 13:09, 9 October 2016

The rice Os01g0248900 was reported as OsEXPA8 in 2013 [1] by researchers from Korea, Mongolia, Russia.

Annotated Information

Figure 3. Morphological changes in 35S :: OsEXPA8 transgenic lines.[1].

Gene Symbol

  • Os01g0248900 <=> OsEXPA8,EXPA8

Function

  • Accumulation of OsEXPA8 in Cell Wall Enlarges Cell Size.
  • The Growth of Suspension-cultured Cells is Significantly Increased by OsEXPA8 Overexpression
  • Overexpression of OsEXPA8, Improves Rice Growth and Root System Architecture by Facilitating Cell Extension

Phenotypic analysis

  • Overexpression of OsEXPA8 yielded pleiotropic phenotypes in the root system architecture (Figure 3A–F), plant height, leaf number and leaf size (Figure 3G and H).
  • Compared to wild-type plants, 35S::OsEXPA8 transgenic lines showed similar morphological phenotypes: the length of primary roots (Figure 3A) and number of lateral roots were significantly increased (t-test, P,0.01).
  • The size of root hairs in the root apex of 35S::OsEXPA8 plants has been increased clearly by stereoscope (Figure 3B and C) and Cryo-SEM images (Figure 3D and E). At maturity, the difference of the root system architecture between transgenic lines and wild-type plants was also significant, and transgenic lines developed more and longer roots (including lateral and adventurous roots) (Figure 3F).

You can also add sub-section(s) at will.

Labs working on this gene

  • Bioengineering College, Chongqing University, Chongqing, China

References

  1. 1.0 1.1 Ma N, Wang Y, Qiu S, Kang Z, Che S, Wang G, Huang J. Overexpression of OsEXPA8, a root-specific gene, improves rice growth and root system architecture by facilitating cell extension. PLoS One. 2013 Oct 4;8(10):e75997. doi: 10.1371/journal.pone.0075997. eCollection 2013. PubMed PMID: 24124527;

Structured Information