Difference between revisions of "Os01g0527600"
(Created page with "{{JaponicaGene|
GeneName = Os01g0527600|
Description = RNA dependent RNA polymerase family protein|
Version = NM_001049764.1 GI:115437171 GeneID:4323938|
Length = 2645 bp|...") |
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| − | + | The rice '''''Os01g0527600''''' was reported as '''''OsRDR6''''' in 2012 <ref name="ref1" /> by researchers from China. | |
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| − | + | ==Annotated Information== | |
| − | + | [[File:51-Os01g0527600.png|right|thumb|427px|'''Figure 1.''' ''Characterization of the rice temperature-sensitive mutant osrdr6-1.<ref name="ref1" />.'']] | |
| − | + | ===Gene Symbol=== | |
| − | + | *'''''Os11g0267000''''' '''<=>''' '''''OsRDR6,OsSHL2,RDR6,SHL2''''' | |
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| − | + | ===Function=== | |
| − | + | * The rice '''''OsRDR6''''' acts in the biogenesis of various types and sizes of small RNAs. | |
| − | + | * OsRDR6-dependent tasiR-ARFs play key roles in lemma development in rice. | |
| − | + | * '''''OsRDR6''''' is required for the biogenesis of 24-nt phased small RNAs. | |
| − | + | * '''''OsRDR6'''''-dependent 24-nt phased small RNAs are independent of the RNA-directed DNA methylation (RdDM) pathway. | |
| − | + | * '''''OsRDR6''''' mediates secondary small RNA biogenesis in rice. | |
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| − | + | ===Phenotypic analysis=== | |
| − | + | * The researchers identified a spontaneous rice mutant with pleiotropic spikelet defects, with most spikelets showing needle-shaped, awn-like lemma; this phenotype is similar to that of shl2-rol and osdcl4-1 mutants (Liu et al., 2007; Nogueira et al., 2007; Toriba et al., 2010). | |
| − | + | * Unlike the con- sistent spikelet defects in shl2-rol and osdcl4-1, the osrdr6-1 mutants showed various degrees of spikelet defects under different natural growth conditions. | |
| − | + | * The spikelet defects and altered stamen number of the mutant only occurred at high temperatures and under long-day conditions, as found in July in Hangzhou. Mutant plants were normal when grown in low temperatures and short-day conditions, as found in October at the same location . | |
| − | + | * The developmental defects of osrdr6-1 were rescued by a construct containing the full-length '''''OsRDR6''''' genomic DNA; the transgenic plants ap- peared morphologically identical to wild-type Zhonghua11 (Figure 1b), confirming that the OsRDR6 locus is responsible for the mutant phenotype. | |
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| − | + | You can also add sub-section(s) at will. | |
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| − | + | ==Labs working on this gene== | |
| − | + | * State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China | |
| − | [[Category:Genes]] | + | * Crop Molecular Breeding Center, the Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China |
| − | + | * State Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | ==References== |
| − | [[Category:Japonica | + | <references> |
| − | + | * <ref name="ref1"> | |
| − | + | Song X, Wang D, Ma L, Chen Z, Li P, Cui X, Liu C, Cao S, Chu C, Tao Y, Cao X. | |
| + | Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet | ||
| + | development. Plant J. 2012 Aug;71(3):378-89. doi: | ||
| + | 10.1111/j.1365-313X.2012.05001.x. Epub 2012 Jun 5. PubMed PMID: 22443269. | ||
| + | </ref> | ||
| + | |||
| + | </references> | ||
| + | |||
| + | ==Structured Information== | ||
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] | ||
Latest revision as of 04:45, 12 October 2016
The rice Os01g0527600 was reported as OsRDR6 in 2012 [1] by researchers from China.
Contents
Annotated Information
Figure 1. Characterization of the rice temperature-sensitive mutant osrdr6-1.[1].
Gene Symbol
- Os11g0267000 <=> OsRDR6,OsSHL2,RDR6,SHL2
Function
- The rice OsRDR6 acts in the biogenesis of various types and sizes of small RNAs.
- OsRDR6-dependent tasiR-ARFs play key roles in lemma development in rice.
- OsRDR6 is required for the biogenesis of 24-nt phased small RNAs.
- OsRDR6-dependent 24-nt phased small RNAs are independent of the RNA-directed DNA methylation (RdDM) pathway.
- OsRDR6 mediates secondary small RNA biogenesis in rice.
Phenotypic analysis
- The researchers identified a spontaneous rice mutant with pleiotropic spikelet defects, with most spikelets showing needle-shaped, awn-like lemma; this phenotype is similar to that of shl2-rol and osdcl4-1 mutants (Liu et al., 2007; Nogueira et al., 2007; Toriba et al., 2010).
- Unlike the con- sistent spikelet defects in shl2-rol and osdcl4-1, the osrdr6-1 mutants showed various degrees of spikelet defects under different natural growth conditions.
- The spikelet defects and altered stamen number of the mutant only occurred at high temperatures and under long-day conditions, as found in July in Hangzhou. Mutant plants were normal when grown in low temperatures and short-day conditions, as found in October at the same location .
- The developmental defects of osrdr6-1 were rescued by a construct containing the full-length OsRDR6 genomic DNA; the transgenic plants ap- peared morphologically identical to wild-type Zhonghua11 (Figure 1b), confirming that the OsRDR6 locus is responsible for the mutant phenotype.
You can also add sub-section(s) at will.
Labs working on this gene
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
- Crop Molecular Breeding Center, the Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China
- State Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China
