Difference between revisions of "Os01g0795400"

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Please input one-sentence summary here.
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The rice '''''Os01g0795400''''' was reported as '''''Hwi2''''' in 2014 <ref name="ref1" /> by researchers from China.
  
 
==Annotated Information==
 
==Annotated Information==
 +
[[File:54-Os01g0795400-1.png|right|thumb|327px|'''Figure 6.''' ''Postulated functional model of the induction of hybrid weakness..<ref name="ref1" />.'']]
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===Gene Symbol===
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*'''''Os01g0795400''''' '''<=>''' '''''Hwi2,OsHwi2'''''
 
===Function===
 
===Function===
Please input function information here.
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* '''''Hwi1''''' and '''''Hwi2''''' are likely to determine the high temperature-dependent expression of hybrid weakness in interspecific hybrids of rice.
 +
* '''''Hwi2''''', a rare allele that is pre- dominantly distributed in indica rice (Oryza sativa), encodes a secreted putative subtilisin-like protease.
 +
* Functional analysis indicated that pyramiding of '''''Hwi1''''' and '''''Hwi2''''' activates the autoimmune response in the basal nodes of hybrids, interrupting root formation and then impairing shoot growth.
  
===Expression===
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===Postulated functional model===
Please input expression information here.
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* A certain substrate X is able to be processed by Hwi2 out of the plasma membrane. The product is perceived by 25L1–25L2 membrane-targeted heterodimer to activate downstream immune responses, such as PCD and hypersensitive response-like symptoms in the basal nodes of weakness expressed plants, and impair the crown root formation.
 
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* Simultaneously, the immune signal delivers to the above-ground parts. Constitutively activated defence responses suppress the growth of above-ground tissues and organs. On the other hand, the root developmental defect blocks the nutrient uptake of plant, which further impairs the growth and development.
===Evolution===
 
Please input evolution information here.
 
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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* National Key Laboratory of Plant Molecular Genetics, National Center for Plant Gene Research (Shanghai), Shanghai Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China.
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* Centre for Cell and Developmental Biology, School of Life Sciences, Chinese University of Hong Kong, Shatin, New Territories, Hong Kong, China.
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* National Center for Gene Research, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200233, China.
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==References==
 +
<references>
 +
* <ref name="ref1">
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Chen C, Chen H, Lin YS, Shen JB, Shan JX, Qi P, Shi M, Zhu MZ, Huang XH, Feng
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Q, Han B, Jiang L, Gao JP, Lin HX. A two-locus interaction causes interspecific
 +
hybrid weakness in rice. Nat Commun. 2014;5:3357. doi: 10.1038/ncomms4357. PubMed
 +
PMID: 24556665; PubMed Central PMCID: PMC3948059.
 +
</ref>
  
==References==
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</references>
Please input cited references here.
 
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
GeneName = Os01g0795400|
 
Description = Similar to Subtilase|
 
Version = NM_001051045.1 GI:115440460 GeneID:4325628|
 
Length = 4538 bp|
 
Definition = Oryza sativa Japonica Group Os01g0795400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:35447657..35452194|
 
CDS = 35447657..35447731,35447819..35447910,35448078..35448175,35449259..35449414,35449515..35450221<br>|
 
GCID = <gbrowseImage1>
 
name=NC_008394:35447657..35452194
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:35447657..35452194
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>tttcagcgctttccagctttcctcctattttgtgtatggcttttgatgatcagaggaatatatggatctcgcaagttgtacattgcctatctgggcgagaagaaatatgatgaccctactcttgtcactgcctcacaccatgacatgctcaccagcgttcttggaagcaaggaagaggcgctggcctccattgcttacagctacaaacatggcttctcaggctttgcagcaatgctaacagaggagcaagcagataatcttgcagatttacctgaagtgatcagtgttaccccaaataagcaacatgaattgctgaccacaagaagttgggatttcctcggactgaactaccaaccacccaataaacttctgcagaggagcaaatatggagaagatgtaattattggaatgattgacactggtatctggcctgaatcaagaagcttcagtgatcatggatacggaccaataccatcacgatggaagggcgtgtgtcaactaggacaggcctgggggccaaccaactgcagcaggaaaatcattggtgcacggtactatgctgcaggtatagaaaaagctgactttaagaagaattacatgtctgcccgggacatgatcgggcatggaacgcatacagcatccatagcagctggtgcagtggtagatggagtcagcgtccatggcctagcaacaggagtagcccgtggaggtgcaccccgagcacgtcttgctgtgtataaggtcatatggaacacagggaatagcctacagcttgctagtgccggagtgctagcagctctagatgatgcaattcatgatggagttgatatcctgtccctctcaattcatgctgatgaggattcatttggtgcactccatgcagtccagaaggggattaccattgtttatgctgggggaaacgatggccctcgaccacaagttattttcaatacagctccttgggttattacagccgcagcaagcaagattgatcggtcttttccaactaccattaccctgggaaacaagcaaacattagtggtaaatagtagaaacacaatctcttggctccgttcgatactgcatataggatatgattattgcttgcacaggaaacaggaaagatga</cdnaseq>|
 
AA = <aaseq>FQRFPAFLLFCVWLLMIRGIYGSRKLYIAYLGEKKYDDPTLVTA                    SHHDMLTSVLGSKEEALASIAYSYKHGFSGFAAMLTEEQADNLADLPEVISVTPNKQH                    ELLTTRSWDFLGLNYQPPNKLLQRSKYGEDVIIGMIDTGIWPESRSFSDHGYGPIPSR                    WKGVCQLGQAWGPTNCSRKIIGARYYAAGIEKADFKKNYMSARDMIGHGTHTASIAAG                    AVVDGVSVHGLATGVARGGAPRARLAVYKVIWNTGNSLQLASAGVLAALDDAIHDGVD                    ILSLSIHADEDSFGALHAVQKGITIVYAGGNDGPRPQVIFNTAPWVITAAASKIDRSF                    PTTITLGNKQTLVVNSRNTISWLRSILHIGYDYCLHRKQER</aaseq>|
 
DNA = <dnaseqindica>1..75#163..254#422..519#1603..1758#1859..2565#tttcagcgctttccagctttcctcctattttgtgtatggcttttgatgatcagaggaatatatggatctcgcaaggtatgcacagtgcatcaccctacatcttattttgtatgcagatttggtggtcaaagatgttttctctgcttctctatatatgcatagttgtacattgcctatctgggcgagaagaaatatgatgaccctactcttgtcactgcctcacaccatgacatgctcaccagcgttcttggaaggtaatctaaggagtttatttgctttggggtgttttagttcttaccttctcaacaccaatattattttatgagctgcctatttgcttcaacaactccaaacacttcattttataactaactataaacatgttcggtgttgtttctcatggcttaccactttgtttcagcaaggaagaggcgctggcctccattgcttacagctacaaacatggcttctcaggctttgcagcaatgctaacagaggagcaagcagataatcttgcaggtgaactgagtttagctaacaaaagttaacttgactaactcagtgctaaatttaccagtcatgtttgttatgtgcatggtatgggtttgagagttgagaccaagggtaggacgctcacttccatctaaccaccggcagaattcttcccaactgcagtacagaagctttgaggtttattgctgaactgggaagaagattagagactttgtttattcttccttgcctagttgtttttcactgtgaacatctcttcataaacagagaagtataaagataaggaaagcaactatcattgtgagaatgtaactaatcaaatcctaatgaccaaatgatcctaaaacgttcctaggattgaatagctactgctttgaccagctgcaattgctgttgatgcggttacctgaatcccatgatggcgacagtaggtctgactcccacactgacaaattcaaagacaaccaaagtgaagaaatcaatcctgatgaatgatgctatttctgaatgatagaaaaagacactcaaaacatattcaacattgattaaaaacagctcctttatgggaaggtacctatgttaagctattcactttctgcccaagaagaaaaaaactaacacaacttaacacctatatgcccatgggaggggaatgtgtcctatacacacaagcctttacatgtacatactactgtacgcaccaactaataaatatcactaaaaattctagaaaactttgcacatgtactttcaatagtattacatctacgtgtaaagtcccatgttcaaattcatcctacatagagactcgaagcaacacaaaatacaaaattctgacagacttatagtcttaaaactgccagaattttttttccgttatggctaaaatacaatgaatttgaggttaatattttacacgtgtgtaaagtatatgcacaaattttgctagatttttcagtgacatttgttagttcgcgtgtacggagtgtgcaaaggatacgttcccctattggagcactatatatatatggttcttctccttatttatttatacagaagaatttctcatgtatacttttttatgttcagatttacctgaagtgatcagtgttaccccaaataagcaacatgaattgctgaccacaagaagttgggatttcctcggactgaactaccaaccacccaataaacttctgcagaggagcaaatatggagaagatgtaattattggaatgattgacactggttagtacaatatcaccaaatcatctgaaaagaccttggccatacaaattcttgcaaaatccttaatgcgtaaattggaaaacatatgcaattgatgcaggtatctggcctgaatcaagaagcttcagtgatcatggatacggaccaataccatcacgatggaagggcgtgtgtcaactaggacaggcctgggggccaaccaactgcagcaggaaaatcattggtgcacggtactatgctgcaggtatagaaaaagctgactttaagaagaattacatgtctgcccgggacatgatcgggcatggaacgcatacagcatccatagcagctggtgcagtggtagatggagtcagcgtccatggcctagcaacaggagtagcccgtggaggtgcaccccgagcacgtcttgctgtgtataaggtcatatggaacacagggaatagcctacagcttgctagtgccggagtgctagcagctctagatgatgcaattcatgatggagttgatatcctgtccctctcaattcatgctgatgaggattcatttggtgcactccatgcagtccagaaggggattaccattgtttatgctgggggaaacgatggccctcgaccacaagttattttcaatacagctccttgggttattacagccgcagcaagcaagattgatcggtcttttccaactaccattaccctgggaaacaagcaaacattagtggtaaatagtagaaacacaatctcttggctccgttcgatactgcatataggatatgattattgcttgcacaggaaacaggaaagatgattagcatataattaattaactattataaacttaaaaagtggatttatttgattttttaaagaaacttctataaggaaaacttttgcacaaagcgcaccatttaacagtttggaaagcgtgtgcacgaaaatgaggaaaattttcagcccactagcagtatcgaacggagcgctcctagaggcacctttcctcgcctatcatctccaaacacttaccactcaaaatttatgtgcaaatctctatcatatttgcagggtcaatcattatattacaagttaaacaacgaatccaagagtgggttccaaccacttgtaaatggtggagagtatgtgcatttctgtttaacttattgattaactaaattcatggatagatggcagcttagattctgatgttgcatttccaaattggttgagcaaccattgtttctgtctgcagttgttcaaaaggggcattgaatggaacaacaatcaatggaagcattgttctgtgcatcgaaataacttatggaccaatactaaattttgtcaatactgtcttcgaaaacgtttttagtggtggggcatctggtcttattttcggactgtataccacagatatgcttttgcgcactgaagattgccaaggcataccctgtgttttagtcgatattgatattgggtctcaagttgcaacatacattggtagtcaaaggtaggaaaaaattcatgtgaagaaccaggcttagtaattgtattttctgtggaactatatttatttagtctaaaataatatggtctttgtactaagcagcatgccggttgcaaagattgaaccagcacatagtattacaggaaaagaagtcctggctccaaaggtggcaatattctcatcaagaggcccatccactaggtaccctacagttcttaaggtaaacaaagctgaaacggtgcacattcttttgacctaaccaactttgagttgcttgtaatagtgatctcagtaggcttgcaatgctttactgcaatggtataatctcattataattactttaacagccagacatagcagcaccaggggtcaacatcctagcagccaaagaagatggatatgcatttaactcggggacttcaatggcagccccacatgtagcaggtgtcatagcattgctaaaggctctgcatcctgattggtctcatgctgctctaaaatcagccattgttacctcaggtaagctatactatccacatgaaacactatgtttatcaatccaataacatggtcttacatgtgattgtcttttgcatggccaaagcatcaaccaaggatgaatatggcatgccaatattagcggaagctctacctcggaaagttgctgacccattcgactatggaggggggaacataaatcctaatggagctgcagatcccggcctgatttacaacattgatccaatggactacaacaaattcttcgcttgcaagatcaaaaaacatgagatctgcaacattacaactttacctgcctatcacctcaacttgccttctatatcaattcctgaactaaggcatccaatcaaggtgcggcgagcagtcacaaatgtgggggaagtcgatgcagtttatcaatctgctatacagagccccctaggagtcaagatcgatgttgaacctccaaccctagtcttcaatgccacaaagaaagtgaacaccttcaaggtcagcatgagacccttgtggaaagtgcaaggggaatacacatttggaagcctaacttggtacaacgagcatcacacggtaaggatccccatcgcagtccggatcacaatccgagatttctatgcggatgttgcatagtaatccagaggattactcaatagtcaataataaagaacggtgatcatctacatatggtcaccttagatcggaaaactacttgtacttggcaaaattttcttgcactatctacaataaatccttcgattttatggttc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051045.1 RefSeq:Os01g0795400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 05:34, 12 October 2016

The rice Os01g0795400 was reported as Hwi2 in 2014 [1] by researchers from China.

Annotated Information

Figure 6. Postulated functional model of the induction of hybrid weakness..[1].

Gene Symbol

  • Os01g0795400 <=> Hwi2,OsHwi2

Function

  • Hwi1 and Hwi2 are likely to determine the high temperature-dependent expression of hybrid weakness in interspecific hybrids of rice.
  • Hwi2, a rare allele that is pre- dominantly distributed in indica rice (Oryza sativa), encodes a secreted putative subtilisin-like protease.
  • Functional analysis indicated that pyramiding of Hwi1 and Hwi2 activates the autoimmune response in the basal nodes of hybrids, interrupting root formation and then impairing shoot growth.

Postulated functional model

  • A certain substrate X is able to be processed by Hwi2 out of the plasma membrane. The product is perceived by 25L1–25L2 membrane-targeted heterodimer to activate downstream immune responses, such as PCD and hypersensitive response-like symptoms in the basal nodes of weakness expressed plants, and impair the crown root formation.
  • Simultaneously, the immune signal delivers to the above-ground parts. Constitutively activated defence responses suppress the growth of above-ground tissues and organs. On the other hand, the root developmental defect blocks the nutrient uptake of plant, which further impairs the growth and development.

You can also add sub-section(s) at will.

Labs working on this gene

  • National Key Laboratory of Plant Molecular Genetics, National Center for Plant Gene Research (Shanghai), Shanghai Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China.
  • Centre for Cell and Developmental Biology, School of Life Sciences, Chinese University of Hong Kong, Shatin, New Territories, Hong Kong, China.
  • National Center for Gene Research, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200233, China.

References

  1. 1.0 1.1 Chen C, Chen H, Lin YS, Shen JB, Shan JX, Qi P, Shi M, Zhu MZ, Huang XH, Feng Q, Han B, Jiang L, Gao JP, Lin HX. A two-locus interaction causes interspecific hybrid weakness in rice. Nat Commun. 2014;5:3357. doi: 10.1038/ncomms4357. PubMed PMID: 24556665; PubMed Central PMCID: PMC3948059.

Structured Information