Difference between revisions of "Os01g0839200"

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Please input one-sentence summary here.
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The rice '''''Os01g0839200''''' was reported as '''''OsDSR2''''' in 2014 <ref name="ref1" /> by researchers from China and the USA.  
  
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''''Os01g0839200''''' '''''<=>''''' '''''OsDSR2''''','''''DSR2'''''
 
===Function===
 
===Function===
Please input function information here.
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* '''''OsDSR2''''' encodes a protein with a DUF966 domain.
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* Overexpression  '''''OsDSR2''''' in rice resulted in enhanced sensi- tivity to ABA-dependent salt and simulated drought stresses by downregulating the expression of multiple stress-responsive genes.
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===Phenotypic analysis===
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* In salt-containing medium, the shoot length, root number and fresh weight of transgenic seedlings were significantly less than that of WT seedlings. However, root length was not significantly different between transgenic and WT seedlings. In normal MS medium, there was no difference in these growth indicators between transgenic and WT seedlings. To further confirm transgenic plants’ sensitivities to salt stress, the transgenic plants of another line T12 were tested for salt response.
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* After salt stress, transgenic plants exhibited significantly enhanced salt sensitivity. As expected, they displayed markedly lower survival rate compared with WT plants. These results suggested that the overexpression of the OsDSR2 could increase salt sensitivity of rice at the seedling stage.
  
 
===Expression===
 
===Expression===
Please input expression information here.
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* '''''OsDSR2''''' was expressed mainly in nodes of stems and leaf blades from rice.  
 
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* Expression profile analysis of adversity showed that '''''OsDSR2''''' had different transcriptional responses to salt, drought, cold, heat and oxidative (H2O2 ) stresses, as well as abscisic acid (ABA), methyl jasmonate, salicylic acid, gibberellin acid and auxin treatments.
===Evolution===
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=== Subcellular localization===
Please input evolution information here.
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* Subcellular localization analysis demonstrated that '''''OsDSR2''''' was localized in the membrane and nucleus.<br><br>
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[[File:60-Os01g0839200.png|center|thumb|727px|'''Figure 4.''' ''Subcellular localizationof OsDSR2.<ref name="ref1" />.'']]
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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* Xiamen Key Laboratory for Plant Genetics, School of Life Sciences, Xiamen University, Xiamen 361005, China
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* Development Center of New Technique Application and Research, Ningxia University, Yinchuan 750021, China
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* Department of Genetics and Biochemistry, Clemson University, Clemson, SC 29634, USA
  
 
==References==
 
==References==
Please input cited references here.
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<references>
 +
* <ref name="ref1">
 +
Luo C, Guo C, Wang W, Wang L, Chen L. Overexpression of a new
 +
stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases
 +
salt and simulated drought stress sensitivities and reduces ABA sensitivity in
 +
rice. Plant Cell Rep. 2014 Feb;33(2):323-36. doi: 10.1007/s00299-013-1532-0. Epub
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2013 Nov 20. PubMed PMID: 24247850.
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</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
GeneName = Os01g0839200|
 
Description = Protein of unknown function DUF966 family protein|
 
Version = NM_001051286.1 GI:115440942 GeneID:4327381|
 
Length = 2442 bp|
 
Definition = Oryza sativa Japonica Group Os01g0839200, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:37758406..37760847|
 
CDS = 37758531..37758675,37759497..37760285,37760390..37760459,37760577..37760808|
 
GCID = <gbrowseImage1>
 
name=NC_008394:37758406..37760847
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:37758406..37760847
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcagtggtggtggctggcagcagggggaaaggggagcagcagcggctgccgtggcgagaggcgcagcaggaggcgaggtgccccgacatggcgccgtcgcggccgccaaggccaaggccggggccggcgagggccgccgtcgtgtactacctctcgaggaacgggcacctcgagcacccgcatttcatggaggttgccgtcgcctcacctgacgggctctacctccgagatgtgatcgaccggctcgacgcgctcagaggcaaggggatggcgcgcatgtactcgtgggcgtccaaaaggagctaccggaacgggttcgtgtggcacgacctggcggacgacgactacatctacccggtggctgggcgagagtacgtgctcaagggcacggagcggctgcacccgatccagctcccgctgctcgacgcggccgccgcgtcgtcctgctcctcgggctcgcaggagacggccacgtcctcgccgcccgggtgggagaacggcaccggcgaggcgcgccaaaagaagggcgcgggaataaacacgtcggagctttgtgagtacagggtgtacaaggccgaggaccccgccgcggcggccgcggacgccgcgacgcagaccgaggacggttaccgcagcagccgcggtagacacgcccagcgcgccgcggccgcggcggcgcaggaggagctgagcagagaggagacgtcgccgccgacggcgtcgacgagccccgagacgctcgaggcgctgatcaaggcggacggacgcgtcatggcggccgtcaccggcggcgggaggaccagggcgtcgtccgtgctcatgcagctcatctcgtgcgggtccgtctccgtcaagagcacgctcgcctcgccggtgatggctcgcaccgccgcgcactaccgtccacggccaccgcgcccacctacactcgcgtcgaccaccaccgagatcccgaactaccgccaaaagatcgtcgaggacaaggagtacttcagcggtagcctcgtcgagacgaagcgctcgtcgccggccgacacgtcccaagacattgccgttctccggcggtcatcctcttacaacgccgacagggtgcagaaggtggagccgtcgacggaggccgtggacatgcacgacagatgcatcccgcggaggcccaggggcaagaaggacggcggcgcctacctcatctccggcgggaacgggcagtacgggagcaaaaggcacgggggatga</cdnaseq>|
 
AA = <aaseq>MAVVVAGSRGKGEQQRLPWREAQQEARCPDMAPSRPPRPRPGPA                    RAAVVYYLSRNGHLEHPHFMEVAVASPDGLYLRDVIDRLDALRGKGMARMYSWASKRS                    YRNGFVWHDLADDDYIYPVAGREYVLKGTERLHPIQLPLLDAAAASSCSSGSQETATS                    SPPGWENGTGEARQKKGAGINTSELCEYRVYKAEDPAAAAADAATQTEDGYRSSRGRH                    AQRAAAAAAQEELSREETSPPTASTSPETLEALIKADGRVMAAVTGGGRTRASSVLMQ                    LISCGSVSVKSTLASPVMARTAAHYRPRPPRPPTLASTTTEIPNYRQKIVEDKEYFSG                    SLVETKRSSPADTSQDIAVLRRSSSYNADRVQKVEPSTEAVDMHDRCIPRRPRGKKDG                    GAYLISGGNGQYGSKRHGG</aaseq>|
 
DNA = <dnaseqindica>2173..2317#563..1351#389..458#40..271#agcagcagcagccagcaagggtaggttaggttgacgaggatggcagtggtggtggctggcagcagggggaaaggggagcagcagcggctgccgtggcgagaggcgcagcaggaggcgaggtgccccgacatggcgccgtcgcggccgccaaggccaaggccggggccggcgagggccgccgtcgtgtactacctctcgaggaacgggcacctcgagcacccgcatttcatggaggttgccgtcgcctcacctgacgggctctacctccgaggtacgtgcgtgtgctcagcttgatcgtctcgtcgtcgcgcgtttcggtttttcttttgtttttgttgctgcattcgccgccgttccgtgacgtcgtcgtcgtcgttgctgtgcgtagatgtgatcgaccggctcgacgcgctcagaggcaaggggatggcgcgcatgtactcgtgggcgtccaaaaggttagtttttttcacgaacttgttcttgttgtggcttgcttgccagtgaggtgcaagcgagcattggacatgggatcgtcctcaatgttgtggcaatattgcaggagctaccggaacgggttcgtgtggcacgacctggcggacgacgactacatctacccggtggctgggcgagagtacgtgctcaagggcacggagcggctgcacccgatccagctcccgctgctcgacgcggccgccgcgtcgtcctgctcctcgggctcgcaggagacggccacgtcctcgccgcccgggtgggagaacggcaccggcgaggcgcgccaaaagaagggcgcgggaataaacacgtcggagctttgtgagtacagggtgtacaaggccgaggaccccgccgcggcggccgcggacgccgcgacgcagaccgaggacggttaccgcagcagccgcggtagacacgcccagcgcgccgcggccgcggcggcgcaggaggagctgagcagagaggagacgtcgccgccgacggcgtcgacgagccccgagacgctcgaggcgctgatcaaggcggacggacgcgtcatggcggccgtcaccggcggcgggaggaccagggcgtcgtccgtgctcatgcagctcatctcgtgcgggtccgtctccgtcaagagcacgctcgcctcgccggtgatggctcgcaccgccgcgcactaccgtccacggccaccgcgcccacctacactcgcgtcgaccaccaccgagatcccgaactaccgccaaaagatcgtcgaggacaaggagtacttcagcggtagcctcgtcgagacgaagcgctcgtcgccggccgacacgtcccaagacattgccgttctccggcggtcatcctcttacaacgccgacaggtacaccaatccatccatagctggttaattagtcgcaaaacatcaatgcaaatcaatgttcaacgccagtatccaaatcggtacgaccagttagttaccatgccgtagcagtttagaactccatttggttggttgaatggttgcctctaaatctctcgtagagtcgtagttgtaaggaataacacatgaactggtactgttgcattgaaccatactgccgtggcggcagttaagaattgctagtgcggcactgaactcctctgcaaatgccattgctgtacatgcaagatatgaggagtagtgtacctgattagtggttgcgttcataaatggaagtaggtctcgcggagctgtctcgcacagagccgacgggatgaatggggaatgtcagggacggggcttgaattctcgtcccgccctaattaatccatgcgagccttcatcgaaaagccttgattagctcgttgagagccatatcgcgtcaatgataagccgcactcaatcacgtgtgtgacgaggtgagggatcggagtaactaatgaatatgacgcgagctcctagcagcagtagcaccagcctttgtcagcaatttgaagtcattgaactctgctttaagcgtggtccagagccctaacccagaacctgataacgtagttatcatcatatctgctgctgcacggcgctcgccgttgcttaaaaagaacccaatactactagccaggctagcctgcctctgtgtggcgtcatggagtacgatgagaatatgatgatgatgagttggtgatatgatggtatgctatctctgcctcgcggcatggcagggtgcagaaggtggagccgtcgacggaggccgtggacatgcacgacagatgcatcccgcggaggcccaggggcaagaaggacggcggcgcctacctcatctccggcgggaacgggcagtacgggagcaaaaggcacgggggatgaggagtttgggcttgggttcaggcttgcgccggtgtggtgatctcatactacctattgtacgggatgataattccgaaattgatactcctatatgttagccattaattatgttctgtatatgcctc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051286.1 RefSeq:Os01g0839200]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 13:41, 13 October 2016

The rice Os01g0839200 was reported as OsDSR2 in 2014 [1] by researchers from China and the USA.

Annotated Information

Gene Symbol

  • Os01g0839200 <=> OsDSR2,DSR2

Function

  • OsDSR2 encodes a protein with a DUF966 domain.
  • Overexpression OsDSR2 in rice resulted in enhanced sensi- tivity to ABA-dependent salt and simulated drought stresses by downregulating the expression of multiple stress-responsive genes.

Phenotypic analysis

  • In salt-containing medium, the shoot length, root number and fresh weight of transgenic seedlings were significantly less than that of WT seedlings. However, root length was not significantly different between transgenic and WT seedlings. In normal MS medium, there was no difference in these growth indicators between transgenic and WT seedlings. To further confirm transgenic plants’ sensitivities to salt stress, the transgenic plants of another line T12 were tested for salt response.
  • After salt stress, transgenic plants exhibited significantly enhanced salt sensitivity. As expected, they displayed markedly lower survival rate compared with WT plants. These results suggested that the overexpression of the OsDSR2 could increase salt sensitivity of rice at the seedling stage.

Expression

  • OsDSR2 was expressed mainly in nodes of stems and leaf blades from rice.
  • Expression profile analysis of adversity showed that OsDSR2 had different transcriptional responses to salt, drought, cold, heat and oxidative (H2O2 ) stresses, as well as abscisic acid (ABA), methyl jasmonate, salicylic acid, gibberellin acid and auxin treatments.

Subcellular localization

  • Subcellular localization analysis demonstrated that OsDSR2 was localized in the membrane and nucleus.

Figure 4. Subcellular localizationof OsDSR2.[1].

You can also add sub-section(s) at will.

Labs working on this gene

  • Xiamen Key Laboratory for Plant Genetics, School of Life Sciences, Xiamen University, Xiamen 361005, China
  • Development Center of New Technique Application and Research, Ningxia University, Yinchuan 750021, China
  • Department of Genetics and Biochemistry, Clemson University, Clemson, SC 29634, USA

References

  1. 1.0 1.1 Luo C, Guo C, Wang W, Wang L, Chen L. Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant Cell Rep. 2014 Feb;33(2):323-36. doi: 10.1007/s00299-013-1532-0. Epub 2013 Nov 20. PubMed PMID: 24247850.

Structured Information