Difference between revisions of "Os02g0202200"

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(Created page with "{{JaponicaGene| GeneName = Os02g0202200| Description = SPX, N-terminal domain containing protein| Version = NM_001052763.1 GI:115444896 GeneID:4328654| Length = 2484 bp| ...")
 
(Function)
 
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{{JaponicaGene|
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The rice '''''Os02g0202200''''' was reported as '''''SPX2''''' in 2014 <ref name="ref1" /> by researchers from China.  
GeneName = Os02g0202200|
 
Description = SPX, N-terminal domain containing protein|
 
Version = NM_001052763.1 GI:115444896 GeneID:4328654|
 
Length = 2484 bp|
 
Definition = Oryza sativa Japonica Group Os02g0202200, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:Os02g0202200.png|right|thumb|227px|'''Fig. 2.'''Subcellular localization of full-length and deletion derivatives of SPX2 in rice protoplasts.<ref name="ref1" />.'']]
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Gene Symbol===
            clade; Ehrhartoideae; Oryzeae; Oryza.
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*'''''Os02g0202200''''' '''''<=>''''' '''''SPX2''''','''''OsSPX2'''''
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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===Function===
AP = Chromosome 2:5706636..5709119|
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* '''''SPX2''''' is Pi-dependent inhibitors of the activity of OsPHR2 in rice.
CDS = 5706714..5707013,5707100..5707217,5708329..5708753|
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* '''''SPX1''''' and '''''SPX2''''' proteins interact with PHR2 through their SPX domain, inhibiting its binding to P1BS (the PHR1-binding sequence: GNATATNC)
GCID = <gbrowseImage1>
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* '''''SPX2''''' is critical for repressing PHR2 binding to cis ele-ments by protein interaction
name=NC_008395:5706636..5709119
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source=RiceChromosome02
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===Subcellular localization===
preset=GeneLocation
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* Subcellular localization analysis demonstrated that '''''SPX2''''' was mainly localized in the nucleus.
</gbrowseImage1>|
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GSID = <gbrowseImage2>
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You can also add sub-section(s) at will.
name=NC_008395:5706636..5709119
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source=RiceChromosome02
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==Labs working on this gene==
preset=GeneLocation
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* State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
</gbrowseImage2>|
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CDNA = <cdnaseq>atgaagttcggcaagagcctgagcagccagatcgtggagatgcagccggagtggcgcgacaacttcctctcctacaaggacctcaagaagcgcctcaacctcatctccggcggcgccgccggggagagggcgagcaagcggcgtcgcgtcggtggcgcgacggcggtgacggtgacggcggcggcggcgggcgggatgacgctggagcaggccgggttcgtcggcctcctcgacgccgagctcgacaagttcaacttcttcttcctcgagaaggaggaggagtacgtcatcaagcagaaggagctccgggagaggaagatggcatcggcggaggaggtgatgcgcgtgaggaaggagatcgtcgatctccacggcgagatggtgctgctcgagaattacagcgcgctcaactacaccggattggttaaaatcctcaagaagtacgacaagagaaccggctccatgatccgtctccccttcgtccagaaggtgctgcagcaacccttcttcaccaccgacctcctctacaagctcgtgaaggaatgcgaggagatgctggaccagctcatgccgacgaacgaacactcggtagcgagcgaagatgggaaagatgacagcgaaggggaggagaagggttcaaagcccagctcctcctcctcggccaacggtggagccgtcccgggagaggccgaggccgaggatgagaggagcacggacatgaagagcaccgtcacggcggcgctcagggcgctgagagagatccggagcgggagctcgacggtgagcgtcttctccctgccgcctctgcacggcagcaatgggcaggatgaaccggggaggtga</cdnaseq>|
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==References==
AA = <aaseq>MKFGKSLSSQIVEMQPEWRDNFLSYKDLKKRLNLISGGAAGERA                    SKRRRVGGATAVTVTAAAAGGMTLEQAGFVGLLDAELDKFNFFFLEKEEEYVIKQKEL                    RERKMASAEEVMRVRKEIVDLHGEMVLLENYSALNYTGLVKILKKYDKRTGSMIRLPF                    VQKVLQQPFFTTDLLYKLVKECEEMLDQLMPTNEHSVASEDGKDDSEGEEKGSKPSSS                    SSANGGAVPGEAEAEDERSTDMKSTVTAALRALREIRSGSSTVSVFSLPPLHGSNGQD                    EPGR</aaseq>|
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<references>
DNA = <dnaseqindica>79..378#465..582#1694..2118#aatttccatttccccctcgatcccacacaattcgatcccaatttccggttttcgtgtgtgaatcttttggagagatcgatgaagttcggcaagagcctgagcagccagatcgtggagatgcagccggagtggcgcgacaacttcctctcctacaaggacctcaagaagcgcctcaacctcatctccggcggcgccgccggggagagggcgagcaagcggcgtcgcgtcggtggcgcgacggcggtgacggtgacggcggcggcggcgggcgggatgacgctggagcaggccgggttcgtcggcctcctcgacgccgagctcgacaagttcaacttcttcttcctcgagaaggaggaggagtacgtcatcaagcagaaggtaaaaattcgaattcctccgtgttccccttcgcgcttcgcgttcgtcgctgttcctgattggttccgacgacggggcgcgcgcaggagctccgggagaggaagatggcatcggcggaggaggtgatgcgcgtgaggaaggagatcgtcgatctccacggcgagatggtgctgctcgagaattacagcgcgctcaactacaccggtgagccgcccacactctgaatttttctcactgaaatttgcagcagtttatataattttcagagtttttgtactatccatgccaggtgctatcgcgtactgtattcgtgaaatggcacttcacatgatataaacatggctagttttactttcttttttttttctactgtagttcttaggacacatgggaattgaagctgttggggcctgcatttgtgtggtttttgtcacgacgcagcatttttttgtgtgattttttttgtcaggatgtgtgaataggtgaagctgataagttttgtgagtcagtagtacaatttggaacccatataattcgtctaaacggttaaacgaattctaacttttcagactgaatccatatagtccataaaatcggagtaggatagaaacaccagtaaaaaaccaggacacgtggacccatggtgggtgccgcctgtccttttcagaaaggtcaagtttcctgaaaaggggccagtcaattgtttaatatcattttatgggacatcaagcgtgcgtgctgataaaaataagtgtggtgcccactaaactatgttagataagacatgttttccataaagaaatcttggagttgaaaactcgctgacttttataggaccacgtgggccatggcactctactttttgtagttagatgtttttctattactataaaatgtataaacttgttctagcatatttttaatgggagggaccaataaaaaatgtcttttcctttgtgggatcttggattcgtcattttgttgtgagaaacatacttgcactccctaaggaaggaaatatttatcgcttcatgccgttgaaatgacttgcacctatttctttttagctgttggaaacgacagaaaattgtgaccggagggagtataatattacactttctataacttttacatctgatgatgcctataacaatgttataatattccgcagatttttggcttaaattaccggcatttctagcttgatatgcttgctgttatttctgttttgtactcttatttctggatatgcttctacatataaaaattcccttttggtgcaaaggcttatgttacacatgttcctcttgtgcaggattggttaaaatcctcaagaagtacgacaagagaaccggctccatgatccgtctccccttcgtccagaaggtgctgcagcaacccttcttcaccaccgacctcctctacaagctcgtgaaggaatgcgaggagatgctggaccagctcatgccgacgaacgaacactcggtagcgagcgaagatgggaaagatgacagcgaaggggaggagaagggttcaaagcccagctcctcctcctcggccaacggtggagccgtcccgggagaggccgaggccgaggatgagaggagcacggacatgaagagcaccgtcacggcggcgctcagggcgctgagagagatccggagcgggagctcgacggtgagcgtcttctccctgccgcctctgcacggcagcaatgggcaggatgaaccggggaggtgaaaacgagaatgggaaagaaaaggaaatgatcttgacgctgcgttcggtatcgttgtttcgcctgcacttctgctcaaatgctcagtgatcttggcacttggtaggagtttgtaactggctatcagttcatgtttcgttttaacttgggtatttttcgtgtaatctgtttgtttcccacctgctgtaaaaatgagagggaaaaatagattagtataaagttcagggtaaacatagatctcaatgtgcagcctgactactttgtcacttgatgggatgatttttttttgtttatgtgcttctgtgtttgttagatggtttgtatggctgtatatatatatatatttttagtaaattgcagtttgggtc</dnaseqindica>|
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* <ref name="ref1">
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001052763.1 RefSeq:Os02g0202200]|
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Wang Z, Ruan W, Shi J, Zhang L, Xiang D, Yang C, Li C, Wu Z, Liu Y, Yu Y, Shou
}}
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H, Mo X, Mao C, Wu P. Rice SPX1 and SPX2 inhibit phosphate starvation responses
[[Category:Genes]]
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through interacting with PHR2 in a phosphate-dependent manner. Proc Natl Acad Sci
[[Category:Japonica mRNA]]
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U S A. 2014 Oct 14;111(41):14953-8. doi: 10.1073/pnas.1404680111. Epub 2014 Sep
[[Category:Oryza Sativa Japonica Group]]
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30. PubMed PMID: 25271318; PubMed Central PMCID: PMC4205599.
[[Category:Japonica Genes]]
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</ref>
[[Category:Japonica Chromosome 2]]
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</references>
[[Category:Chromosome 2]]
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==Structured Information==
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

Latest revision as of 15:41, 13 October 2016

The rice Os02g0202200 was reported as SPX2 in 2014 [1] by researchers from China.

Annotated Information

Fig. 2.Subcellular localization of full-length and deletion derivatives of SPX2 in rice protoplasts.[1].

Gene Symbol

  • Os02g0202200 <=> SPX2,OsSPX2

Function

  • SPX2 is Pi-dependent inhibitors of the activity of OsPHR2 in rice.
  • SPX1 and SPX2 proteins interact with PHR2 through their SPX domain, inhibiting its binding to P1BS (the PHR1-binding sequence: GNATATNC)
  • SPX2 is critical for repressing PHR2 binding to cis ele-ments by protein interaction

Subcellular localization

  • Subcellular localization analysis demonstrated that SPX2 was mainly localized in the nucleus.

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China

References

  1. 1.0 1.1 Wang Z, Ruan W, Shi J, Zhang L, Xiang D, Yang C, Li C, Wu Z, Liu Y, Yu Y, Shou H, Mo X, Mao C, Wu P. Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner. Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):14953-8. doi: 10.1073/pnas.1404680111. Epub 2014 Sep 30. PubMed PMID: 25271318; PubMed Central PMCID: PMC4205599.

Structured Information