Difference between revisions of "Os02g0595900"

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(Created page with "{{JaponicaGene| GeneName = Os02g0595900| Description = Conserved hypothetical protein| Version = NM_001053852.2 GI:297599531 GeneID:4329861| Length = 2009 bp| Definition ...")
 
 
(8 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''Os02g0595900''' was reported as ''' OsNAR2.1''' in 2011 <ref name="ref1" /> by researchers from the China.  
GeneName = Os02g0595900|
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<br>
Description = Conserved hypothetical protein|
 
Version = NM_001053852.2 GI:297599531 GeneID:4329861|
 
Length = 2009 bp|
 
Definition = Oryza sativa Japonica Group Os02g0595900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:39.png |right |thumb |345px |''''''Figure 2. The OsNAR2.1 mRNA and protein levels in osnar2.1 knockdown mutants (r1 and r2) and WT plants. '''''']]
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Gene Symbol===
            clade; Ehrhartoideae; Oryzeae; Oryza.
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*'''Os02g0595900<=> OsNAR2.1'''
|
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<br>
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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===Function===
AP = Chromosome 2:23979002..23981010|
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*OsNAR2.1 plays a key role in enabling the plant to cope with variable nitrate supply.
CDS = 23979232..23979692,23980756..23980915|
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<br>
GCID = <gbrowseImage1>
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===Expression===
name=NC_008395:23979002..23981010
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*OsNAR2.1 was mainly expressed in roots and induced by nitrate and suppressed by ammonium and some amino acids.
source=RiceChromosome02
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<br>
preset=GeneLocation
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</gbrowseImage1>|
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===Mutant===
GSID = <gbrowseImage2>
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*Knockdown of OsNAR2.1 by RNA interference synchronously suppressed expression of OsNRT2.1, OsNRT2.2 and OsNRT2.3a in the osnar2.1mutants. Both high- and low-affinity nitrate transports were greatly impaired by OsNAR2.1 knockdown.
name=NC_008395:23979002..23981010
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<br>
source=RiceChromosome02
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==Labs working on this gene==
preset=GeneLocation
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*State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences,Nanjing Agricultural University, Nanjing 210095, China 
</gbrowseImage2>|
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*Disease and Stress Biology Department, John Innes Centre,Norwich Research Park, Norwich NR4 7UH, UK.
CDNA = <cdnaseq>atggcgaggctagccggcgttgctgctctctcgttggtgctcgtcttgctcggcgccggcgtgccccggccggcggccgccgccgcggcgaagacgcaggtgttcctctccaagctgcccaaagcgctcgtcgtcggcgtctcgcccaagcacggtgaagtcgtgcacgccggcgagaacacggtgacggtgacgtggtcgctgaacacgtcggagccggcgggcgccgacgcggcgttcaagagcgtgaaggtgaagctgtgctacgcgccggcgagccggacggaccgcgggtggcgcaaggcctccgacgacctgcacaaggacaaggcgtgccagttcaaggtcaccgtgcagccgtacgccgccggcgccggcaggttcgactacgtggtggcgcgcgacatcccgacggcgtcctacttcgtgcgcgcctacgcggtggacgcgtccggcacggaggtggcctacgggcagagctcgccggacgccgccttcgacgtcgccgggatcaccggcatccacgcctccctcaaggtcgccgccggcgtcttctccaccttctccatcgccgcgctcgccttcttcttcgtcgtcgagaagcgcaagaaggacaagtag</cdnaseq>|
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<br>
AA = <aaseq>MARLAGVAALSLVLVLLGAGVPRPAAAAAAKTQVFLSKLPKALV                    VGVSPKHGEVVHAGENTVTVTWSLNTSEPAGADAAFKSVKVKLCYAPASRTDRGWRKA                    SDDLHKDKACQFKVTVQPYAAGAGRFDYVVARDIPTASYFVRAYAVDASGTEVAYGQS                    SPDAAFDVAGITGIHASLKVAAGVFSTFSIAALAFFFVVEKRKKDK</aaseq>|
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DNA = <dnaseqindica>1319..1779#96..255#agcatcagcagcagcagcagattcatttcttggtcttcgtctccgtctccgtccttgggttgatatccagaatcagtcggtttggtttgtcagcaatggcgaggctagccggcgttgctgctctctcgttggtgctcgtcttgctcggcgccggcgtgccccggccggcggccgccgccgcggcgaagacgcaggtgttcctctccaagctgcccaaagcgctcgtcgtcggcgtctcgcccaagcacggtgaaggtatataacaactagtagctgatgatgatgaccttcttgcttctttcttacaaaaaccgtttgaccattcagttactgatcgagcagttaacattttgccaaaagttatttggtttgattttttttttgaacttggccggtttatccagcggtttctaaattcgaaccagctcgacaagaccgacaaccaggcagtttactgttgcattttgaaaccgtgtttgaaccacccaagattgctcttgattagcatgcagcattatgaaccgaaaatgctcttcatggctacctagctagcgattataaaaaaaaagtatttttcgcctaaagtttgatgtaaaatcagccttaagaatatgttccgatacccatttgcgcaactgaaactccgaatgatgatttgtctgatttgtcgcctgtgatcgatgcatccgaaaagggatgaacagcaagggagaagaatatgtccctaagaaactcctatcctagtgatagccaggccggcctatgctattcttttattttaaagaataataataataagatttttttttctcatttcaagttcacttcattttctcatggccgtactacaaaatcttttttttttgttagctcactttcgtttatctttttcttttttaaaaaaaatcatgataagtgcacgttaggcttcgttgaatttggctgttaaaataatcagattaaaagtgtcacatgtactttggctactactctctccgtttcatgttataagacgttttgacttccgtcatagttaaactgtttcaagtttaactaaatttatagacaaatatatgtttaactaagtttatagataaatatagtaatatttttaatactaaattagtttcatcaaatcaataattgaatatatttttataataaatttgtcttgggttaaaaattttactaattttttctataaactaagtcaaacttttaactttgatcaaagttaaaacgttttatatcctgaaacgaaaagagtactactattactaatcactaatcaagggaaaattattccggtggtgagcagtcgtgcacgccggcgagaacacggtgacggtgacgtggtcgctgaacacgtcggagccggcgggcgccgacgcggcgttcaagagcgtgaaggtgaagctgtgctacgcgccggcgagccggacggaccgcgggtggcgcaaggcctccgacgacctgcacaaggacaaggcgtgccagttcaaggtcaccgtgcagccgtacgccgccggcgccggcaggttcgactacgtggtggcgcgcgacatcccgacggcgtcctacttcgtgcgcgcctacgcggtggacgcgtccggcacggaggtggcctacgggcagagctcgccggacgccgccttcgacgtcgccgggatcaccggcatccacgcctccctcaaggtcgccgccggcgtcttctccaccttctccatcgccgcgctcgccttcttcttcgtcgtcgagaagcgcaagaaggacaagtagatcgtcttgctgcaaacgcaagttcgcagcttcagtggactgaattccgttatcggaaaaaaaaaaggaaatgcgtactttagcttgctgttataaatgtatacagtgatgttctcctcggatataattttgtgtttgtttttaccttttttataaaaattatatgtaccttttgtttcttatttttgtttggtcacgtgcaacgaatatgaaaataaattggttgctgt</dnaseqindica>|
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==References==
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053852.2 RefSeq:Os02g0595900]|
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<references>
}}
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<ref name="ref1">
[[Category:Genes]]
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Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration rangespce_2335 1
[[Category:Japonica mRNA]]
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</ref>
[[Category:Oryza Sativa Japonica Group]]
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</references>
[[Category:Japonica Genes]]
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<br>
[[Category:Japonica Chromosome 2]]
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==Structured Information==
[[Category:Chromosome 2]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

Latest revision as of 09:04, 15 October 2016

The rice Os02g0595900 was reported as OsNAR2.1 in 2011 [1] by researchers from the China.

Annotated Information

'Figure 2. The OsNAR2.1 mRNA and protein levels in osnar2.1 knockdown mutants (r1 and r2) and WT plants. '

Gene Symbol

  • Os02g0595900<=> OsNAR2.1


Function

  • OsNAR2.1 plays a key role in enabling the plant to cope with variable nitrate supply.


Expression

  • OsNAR2.1 was mainly expressed in roots and induced by nitrate and suppressed by ammonium and some amino acids.


Mutant

  • Knockdown of OsNAR2.1 by RNA interference synchronously suppressed expression of OsNRT2.1, OsNRT2.2 and OsNRT2.3a in the osnar2.1mutants. Both high- and low-affinity nitrate transports were greatly impaired by OsNAR2.1 knockdown.


Labs working on this gene

  • State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences,Nanjing Agricultural University, Nanjing 210095, China
  • Disease and Stress Biology Department, John Innes Centre,Norwich Research Park, Norwich NR4 7UH, UK.


References

  1. Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration rangespce_2335 1


Structured Information