Difference between revisions of "Os06g0324800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0324800| Description = Major facilitator superfamily protein| Version = NM_001064058.1 GI:115467847 GeneID:4340904| Length = 1214 bp| Defi...")
 
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
The rice '''''Os06g0324800''''' was reported as '''''OsPT9''''' in 2014 <ref name="ref1" /> by researchers from China.  
−
GeneName = Os06g0324800|
 
−
Description = Major facilitator superfamily protein|
 
−
Version = NM_001064058.1 GI:115467847 GeneID:4340904|
 
−
Length = 1214 bp|
 
−
Definition = Oryza sativa Japonica Group Os06g0324800, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
[[File:78-Os06g0324800.png|right|thumb|427px|'''Figure 1.''' ''Tissue expression pattern of OsPT9 and OsPT10 under phosphate (Pi)-sufficient (+P) and Pi-starvation (−P) conditions.<ref name="ref1" />.'']]
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
===Gene Symbol===
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
*'''''Os06g0324800''''' '''''<=>''''' '''''PT9''''','''''OsPT9,OsPHT1;9'''''
−
|
+
===Function===
−
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
+
* High-affinity Km values for Pi transport of '''''OsPT9''''' and '''''OsPT10''''' were determined by yeast experiments and two-electrode voltage clamp analysis of anion transport in Xenopus oocytes expressing '''''OsPT9''''' and '''''OsPT10'''''.
−
AP = Chromosome 6:12748639..12749852|
+
* '''''OsPT9''''' and '''''OsPT10''''' are high-affinity Pi transporters.
−
CDS = 12748757..12749800|
+
* '''''OsPT9''''' and '''''OsPT10''''' redundantly function in Pi uptake.
−
GCID = <gbrowseImage1>
+
 
−
name=NC_008399:12748639..12749852
+
===Expression===
−
source=RiceChromosome06
+
* Semi-quantitative RT-PCR analysis of seedlings grown in solution cultures under Pi-sufficient (+P) or Pi-starvation (–P) conditions as well as starvation of other essential nutrients showed that the expression of '''''OsPT9''''' and '''''OsPT10''''' in both roots and leaves was specifically induced by Pi starvation
−
preset=GeneLocation
+
* The GUS staining analysis showed expression of '''''OsPT9''''' in both roots and leaves under Pi starvation (–P). In contrast, no GUS staining was observed under either Pi-sufficient (+P) or –P conditions for '''''OsPT10''''' (Fig. 1b).
−
</gbrowseImage1>|
+
 
−
GSID = <gbrowseImage2>
+
You can also add sub-section(s) at will.
−
name=NC_008399:12748639..12749852
+
 
−
source=RiceChromosome06
+
==Labs working on this gene==
−
preset=GeneLocation
+
* State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University, Hangzhou 310058,
−
</gbrowseImage2>|
+
China
−
CDNA = <cdnaseq>cgtacaacgagcaggtatacggcgctggtggagcgcgacgtggtgaaggccaccaacgacatcggccgcgtcctggccgacctcgacctggccgccgtcgccgaggaagaggtggcggcggcggcgttgagcccgcctccggtgacgacgccgccgccgccgcgcccttcgtacggcctcttctcgcgccgcttcgtccggcagcatgggagagacctgttcgcgtgcgcggcggcgtggttcctcctcgacatcccctactacagcagcacgctgttccagtcgcagatctaccggccatggttcccgccggcggcgaaggtgaacgcgttccaggaggcgttcaacgtggccaagttccaggccgtcatcgccgtcgcctccaccatcccgggctacttcgccgccatgctcctcatcgagcgcgccggccggcggcgtctccagatggccgggttcctcctcatggccgtcttcctcttcgcgctcgcgggtccctacgatggatactggcgcgaccacgccaagaccgccggctacatcgtgctctactcgctcaccttcttctccgccaacctcgggcccaacaccaccaccttcatcctgccggcggagctcttcccggcgcgcttccggtcgacctgccacggcctgtccggagcggcggggaagctcggcgcgctcgtcggctccatcggcttcctgtgggcgtcgcagcagaaggacggcgcggcggccgggcacctgccgggcatcggcatgatgtacgcgctgttcgttcttggcgggatctgcctgctcgggctggcgctcacctacgcgttcacgccggagacgatgacgcggtcgctggaggagaacgagagcagcgtgcaggcgcagagccaggtcggcgacggcggcagcgatgccggcaatggcagtgatgggctgcgcttccacgaactaaatgttctcatggaggcggcgaccaagagccctgtgtccatggcgagctcgcacctcagcatgtcgcctatccttccgcaccggatgtctctatga</cdnaseq>|
+
* The Key Laboratory for Quality Improvement of Agricultural Products of Zhejiang Province, College of Agriculture and Food Science, Zhejiang A & F University, Lin’an 311300, China
−
AA = <aaseq>RTTSRYTALVERDVVKATNDIGRVLADLDLAAVAEEEVAAAALS                    PPPVTTPPPPRPSYGLFSRRFVRQHGRDLFACAAAWFLLDIPYYSSTLFQSQIYRPWF                    PPAAKVNAFQEAFNVAKFQAVIAVASTIPGYFAAMLLIERAGRRRLQMAGFLLMAVFL                    FALAGPYDGYWRDHAKTAGYIVLYSLTFFSANLGPNTTTFILPAELFPARFRSTCHGL                    SGAAGKLGALVGSIGFLWASQQKDGAAAGHLPGIGMMYALFVLGGICLLGLALTYAFT                    PETMTRSLEENESSVQAQSQVGDGGSDAGNGSDGLRFHELNVLMEAATKSPVSMASSH                    LSMSPILPHRMSL</aaseq>|
+
* Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14853, USA
−
DNA = <dnaseqindica>119..1162#acaattaatttgcactttagctttatgcaagcagttgctagctgcctagctagggtgattaactagaacaaaaagggtttaagcaccgaaccaccaaaaagctaatcaccgtacttaacgtacaacgagcaggtatacggcgctggtggagcgcgacgtggtgaaggccaccaacgacatcggccgcgtcctggccgacctcgacctggccgccgtcgccgaggaagaggtggcggcggcggcgttgagcccgcctccggtgacgacgccgccgccgccgcgcccttcgtacggcctcttctcgcgccgcttcgtccggcagcatgggagagacctgttcgcgtgcgcggcggcgtggttcctcctcgacatcccctactacagcagcacgctgttccagtcgcagatctaccggccatggttcccgccggcggcgaaggtgaacgcgttccaggaggcgttcaacgtggccaagttccaggccgtcatcgccgtcgcctccaccatcccgggctacttcgccgccatgctcctcatcgagcgcgccggccggcggcgtctccagatggccgggttcctcctcatggccgtcttcctcttcgcgctcgcgggtccctacgatggatactggcgcgaccacgccaagaccgccggctacatcgtgctctactcgctcaccttcttctccgccaacctcgggcccaacaccaccaccttcatcctgccggcggagctcttcccggcgcgcttccggtcgacctgccacggcctgtccggagcggcggggaagctcggcgcgctcgtcggctccatcggcttcctgtgggcgtcgcagcagaaggacggcgcggcggccgggcacctgccgggcatcggcatgatgtacgcgctgttcgttcttggcgggatctgcctgctcgggctggcgctcacctacgcgttcacgccggagacgatgacgcggtcgctggaggagaacgagagcagcgtgcaggcgcagagccaggtcggcgacggcggcagcgatgccggcaatggcagtgatgggctgcgcttccacgaactaaatgttctcatggaggcggcgaccaagagccctgtgtccatggcgagctcgcacctcagcatgtcgcctatccttccgcaccggatgtctctatgacaatgtaaattgaaccaaagtaactaaatgtttaaaaaagtgatcattttat</dnaseqindica>|
+
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064058.1 RefSeq:Os06g0324800]|
+
==References==
−
}}
+
<references>
−
[[Category:Genes]]
+
* <ref name="ref1">
−
[[Category:Japonica mRNA]]
+
Wang X, Wang Y, Piñeros MA, Wang Z, Wang W, Li C, Wu Z, Kochian LV, Wu P.
−
[[Category:Oryza Sativa Japonica Group]]
+
Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in
−
[[Category:Japonica Genes]]
+
rice. Plant Cell Environ. 2014 May;37(5):1159-70. doi: 10.1111/pce.12224. Epub
−
[[Category:Japonica Chromosome 6]]
+
2013 Dec 17. PubMed PMID: 24344809.
−
[[Category:Chromosome 6]]
+
</ref>
 +
</references>
 +
 
 +
 
 +
==Structured Information==
 +
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]

Latest revision as of 09:28, 15 October 2016

The rice Os06g0324800 was reported as OsPT9 in 2014 [1] by researchers from China.

Annotated Information

Figure 1. Tissue expression pattern of OsPT9 and OsPT10 under phosphate (Pi)-sufficient (+P) and Pi-starvation (−P) conditions.[1].

Gene Symbol

  • Os06g0324800 <=> PT9,OsPT9,OsPHT1;9

Function

  • High-affinity Km values for Pi transport of OsPT9 and OsPT10 were determined by yeast experiments and two-electrode voltage clamp analysis of anion transport in Xenopus oocytes expressing OsPT9 and OsPT10.
  • OsPT9 and OsPT10 are high-affinity Pi transporters.
  • OsPT9 and OsPT10 redundantly function in Pi uptake.

Expression

  • Semi-quantitative RT-PCR analysis of seedlings grown in solution cultures under Pi-sufficient (+P) or Pi-starvation (–P) conditions as well as starvation of other essential nutrients showed that the expression of OsPT9 and OsPT10 in both roots and leaves was specifically induced by Pi starvation
  • The GUS staining analysis showed expression of OsPT9 in both roots and leaves under Pi starvation (–P). In contrast, no GUS staining was observed under either Pi-sufficient (+P) or –P conditions for OsPT10 (Fig. 1b).

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University, Hangzhou 310058,

China

  • The Key Laboratory for Quality Improvement of Agricultural Products of Zhejiang Province, College of Agriculture and Food Science, Zhejiang A & F University, Lin’an 311300, China
  • Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14853, USA

References

  1. ↑ 1.0 1.1 Wang X, Wang Y, Piñeros MA, Wang Z, Wang W, Li C, Wu Z, Kochian LV, Wu P. Phosphate transporters OsPHT1;9 and OsPHT1;10 are involved in phosphate uptake in rice. Plant Cell Environ. 2014 May;37(5):1159-70. doi: 10.1111/pce.12224. Epub 2013 Dec 17. PubMed PMID: 24344809.


Structured Information