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| − | {{JaponicaGene|
| + | The rice '''Os03g0192700''' was reported as '''RINO1''' in 2015 <ref name="ref1" /> by researchers from the Japan. |
| − | GeneName = Os03g0192700|
| + | <br> |
| − | Description = Similar to Myo-inositol-1-phosphate synthase|
| |
| − | Version = NM_001055777.1 GI:115451282 GeneID:4331917|
| |
| − | Length = 3837 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0192700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''Os03g0192700 <=> RINO1''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | <br> |
| − | |
| + | |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| + | ===Function=== |
| − | AP = Chromosome 3:4804033..4807869|
| + | *the difference in temporal and spatial expression patterns between sense and antisense RINO1 transcripts driven by the RINO1 and the GluB-1 promoter, respectively, are major factors that account for the low level of transcript suppression observed in seeds from the G-22 line. |
| − | CDS = 4804303..4804422,4804525..4804587,4804698..4804886,4804980..4805156,4805272..4805387<br>,4805463..4805689,4806041..4806288,4806708..4806843,4806939..4807007<br>,4807572..4807759|
| + | <br> |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008396:4804033..4807869
| + | ===Expression=== |
| − | source=RiceChromosome03
| + | *Selection of a promoter with the same temporal and spatial expression pattern as RINO1 might be important for suppression of the RINO1 gene in transgenic seeds. |
| − | preset=GeneLocation
| + | *The RINO1 antisense construct was expressed under the control of the oleosin promoter, which specifi cally directs expression in the embryo and the whole aleurone layer from the early stages of seed development. |
| − | </gbrowseImage1>| | + | <br> |
| − | GSID = <gbrowseImage2>
| + | |
| − | name=NC_008396:4804033..4807869 | + | [[File:50.png |center |thumb |10000px |''''''Fig. 2 Expression patterns of GluB1::GUS fusion construct in superior and inferior caryopses at 7 (A, B), 10 (C, D), 14 (E, F), 21 (G, H) and 28 DAF (I, J). Bars indicate 0.5 mm.'''''' ]] |
| − | source=RiceChromosome03
| + | <br> |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atgttcatcgagagcttccgcgtggagagcccgcacgtgcggtacggcgcggcggagatcgagtcggactaccagtacgacacgacggagctggtgcacgagagccacgacggcgcctcccgctggatcgtccgccccaagtccgtccgctacaacttccggaccaccaccaccgtccccaagctcggggtgatgctcgtggggtggggcggcaacaacggctcaacgctgacggctggggtcatcgccaacagggagggaatctcatgggcgaccaaggacaaggtgcagcaagccaactactatggctcactcacccaggcgtccaccatcagggtcgggagctacaacggggaggagatctacgcgcccttcaagagcctcctgcccatggtgaaccctgatgaccttgtgttcgggggctgggacattagcaacatgaacctggctgatgctatgaccagggcaaaggtacttgacattgatctgcagaagcagctcagaccttacatggagtccatggtgcctctccccggcatctatgaccccgacttcatcgccgccaaccagggatcccgcgcgaacaatgtcatcaagggcaccaagaaggagcagatggagcagatcatcaaggacatcagggagttcaaggaaaagagcaaagtggacaaggtggtggtgttgtggactgcaaacactgaaaggtacagcaatgtctgtgttgggctcaatgacacaatggagaacctcctggcgtctgtggacaagaacgaggcggagatatcaccatcgacactgtatgccattgcctgcgtcatggagggtataccgttcattaacgggagtcctcagaacacctttgtgcctgggctgatcgatcttgctattaagaacaactgcctgattggtggtgatgatttcaagagtggacagacaaagatgaagtctgtcttggttgatttcctagttggtgctggaataaagcccacctcaattgtcagctacaaccacttggggaataatgatggcatgaacctttccgcacctcaaacattccgatccaaggagatctccaagagcaatgtggtcgatgacatggtctcaagcaatgccatcctctatgagcttggcgagcatcctgatcatgttgttgtgatcaagtatgtgccgtatgttggagacagcaagagggcaatggacgagtacacctcagagatcttcatggggggtaagagcaccatcgttctgcacaacacctgtgaggactcactccttgccgcgccgatcattcttgatctggtgctccttgccgagctcagcaccaggattcagctgaaagccgagggggaggagaagttccattccttccatccagtggctaccatcctgagctacctcaccaaggcaccccttgttcctcctggcacaccagtggtgaacgccctggcaaagcagagggcaatgcttgagaacatcatgagggcctgcgttgggctggcccccgagaacaacatgatcctggagtacaagtga</cdnaseq>|
| + | *Graduate School of Agricultural and Life Sciences, University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo. 113-8657 Japan |
| − | AA = <aaseq>MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIV RPKSVRYNFRTTTTVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYY GSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLD IDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKE KSKVDKVVVLWTANTERYSNVCVGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGI PFINGSPQNTFVPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVS YNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYELGEHPDHVVVIKYVPYV GDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGE EKFHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILE YK</aaseq>|
| + | *National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba, Ibaraki. 305-8602 Japan |
| − | DNA = <dnaseqindica>3448..3567#3283..3345#2984..3172#2714..2890#2483..2598#2181..2407#1582..1829#1027..1162#863..931#111..298#cacagcctacctagcttctccttctcgctcgcttcgcccgcataagtctagccacaaacccgccgccgccgccgccgccgccgccgctagcttccgcggagcggggcgagatgttcatcgagagcttccgcgtggagagcccgcacgtgcggtacggcgcggcggagatcgagtcggactaccagtacgacacgacggagctggtgcacgagagccacgacggcgcctcccgctggatcgtccgccccaagtccgtccgctacaacttccggaccaccaccaccgtccccaagctcgggtacgcacccattaccctcgccgatcgatcgatctgtccaccgatcgctttcgatccggcgtccgtcctgttctcgttttcgttttcgtctcccgtttggtctccgtgtttttcctagctatagctagcgcccgatccagcgagatgtgggatggcaaaaggccaaagagggggactgcgagtctgcggcgccttttgttgccttgctgctcggccaccgtggaaatttgcctgtctctgggattcgatcccgtctgctcaaaacgacatttcttctgagttttttttatatccgctagtttttattattatggctttatcccatggctgcacctgcactgcatgtgaggtttccattaaaattttgcatctgcaagatcgagcagggggacctacctagtaccatatataccactggcaagaactcccaaatttatgactgtttattagcttcttttattagttcaccccatttgttttgtttttttttctgtccatgttggctacgtgccagcacacttgtcgatcatgtttcttgacccagttttatggctgtgggtgcagggtgatgctcgtggggtggggcggcaacaacggctcaacgctgacggctggggtcatcgccaacagggagtaagtgatcactcacgctctacttttctgcctaagctagcttcatctgttttttcttttctgaatttaactgatgatggtgtgagtttaatcaggggaatctcatgggcgaccaaggacaaggtgcagcaagccaactactatggctcactcacccaggcgtccaccatcagggtcgggagctacaacggggaggagatctacgcgcccttcaagagcctcctgcccatggtaatctgtcctgttttctttgacatgctaaccacggaaaagatggtagtagtaatacactgctaatgtgatagtagtagtgctagtacaatcataacatggccttggcctgttttaaaggccaaggttctaaatgaaaagaagaaactttgacttgtggtcatgtcctaaaaaagaaaaagataagtcctgtcacaaaagggtatcaaaagataagtcctgtcataaaagggtgtcaaaaggtgaccatcgtgtgtcacctttgtcatgttgtgatgatgcaagtcaaaatgttgtggtacaaccacaaggttccagcatctttggacaatgattgatctgttgaatacatccacaaatagttttcagatttgcagaacctgtttttccgttttctgatggttatgaaaaaaattcaggtgaaccctgatgaccttgtgttcgggggctgggacattagcaacatgaacctggctgatgctatgaccagggcaaaggtacttgacattgatctgcagaagcagctcagaccttacatggagtccatggtgcctctccccggcatctatgaccccgacttcatcgccgccaaccagggatcccgcgcgaacaatgtcatcaagggcaccaagaaggagcagatggagcagatcatcaaggacatcaggtatactggcatgcatggaattgagcccattttacttcataacaaaaaggaatagtattctgaattagttatgtctacgaggcatgaacactaggggcagaaataacggaataccttcaggcaccagcttataacagaaaatagtattcacatgatatggtgtcaaagcactaaatatatattggcactttcatatatcaaaagggctccccgaagagttatactactgaagtgaacttgtttcgtaagattagttccagtctgcattaagatggttggaacaacatgacaaacttgtgactatgaatgctgtaaacattagacatgatattttttttattacttaaatagggagttcaaggaaaagagcaaagtggacaaggtggtggtgttgtggactgcaaacactgaaaggtacagcaatgtctgtgttgggctcaatgacacaatggagaacctcctggcgtctgtggacaagaacgaggcggagatatcaccatcgacactgtatgccattgcctgcgtcatggagggtataccgttcattaacgggagtcctcagaacacctttgtgcctggtatgtaattttctgtgtagagtagtatgcggtttattttctcaggttcatggcttatttgtttactgtgtacagggctgatcgatcttgctattaagaacaactgcctgattggtggtgatgatttcaagagtggacagacaaagatgaagtctgtcttggttgatttcctagttggtgctggaataaaggtaccaaccatatatcaaatcctttggctagcttttcgcattgaaacgtcgatattcttccggaaacttttttttatatataacctgataagaactttggcttttgttttcgtagcccacctcaattgtcagctacaaccacttggggaataatgatggcatgaacctttccgcacctcaaacattccgatccaaggagatctccaagagcaatgtggtcgatgacatggtctcaagcaatgccatcctctatgagcttggcgagcatcctgatcatgttgttgtgatcaaggtttgcaatttgtccatggattcttctgcagcagtatgccattaaaaaaaaacttagttttggattaaaacttgtccatgtattcttctgcagtatgtgccgtatgttggagacagcaagagggcaatggacgagtacacctcagagatcttcatggggggtaagagcaccatcgttctgcacaacacctgtgaggactcactccttgccgcgccgatcattcttgatctggtgctccttgccgagctcagcaccaggattcagctgaaagccgagggggaggtaagagttctgatggactgagatcaattgactctctgctgctctgcaattgccaccctttttgccagcaaaattgactatgttgttgtttcacttgttatcctgtgcaggagaagttccattccttccatccagtggctaccatcctgagctacctcaccaaggcaccccttgtgagtgcatacatgcatctgtactgcccattaaccgttatgttctttcatgatataccaactgatttacttatgtcacgaaaaattcgtctcctggaacaggttcctcctggcacaccagtggtgaacgccctggcaaagcagagggcaatgcttgagaacatcatgagggcctgcgttgggctggcccccgagaacaacatgatcctggagtacaagtgagggaggctgccgaggccgagcagccgtggcatgtggcaaagaggcgaatgggatggagcaagaaagacgtgattagctagctctaagaattgttttagcttctcttgtgatttttcggtctttcccattcttaaccttctgtgctttgtgtgagactcttatcgggctatgcaactagcagcagccttactatggtactggatgatgttatggagaatgttagctagttcccctctatttataacttattagtatcggagatttcagttc</dnaseqindica>|
| + | <br> |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055777.1 RefSeq:Os03g0192700]|
| + | ==References== |
| − | }}
| + | <references> |
| − | [[Category:Genes]] | + | <ref name="ref1"> |
| − | [[Category:Japonica mRNA]]
| + | Differential Effects of a Transgene to Confer Low Phytic Acid in Caryopses Located at Different Positions in Rice Panicles |
| − | [[Category:Oryza Sativa Japonica Group]] | + | </ref> |
| − | [[Category:Japonica Genes]] | + | |
| − | [[Category:Japonica Chromosome 3]]
| + | </references> |
| − | [[Category:Chromosome 3]]
| + | <br> |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
