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| − | Please input one-sentence summary here.
| + | The rice gene Os05g0386800 was reported as '''''OsBC1L4''''' in 2009<ref name="ref1" /> by researchers from China. |
| | + | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os05g0386800 <=> OsBC1L4, BC1L4 |
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| − | ==Annotated Information==
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| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * '''''OsBC1L4''''' might be involved in the biosynthesis of cell wall and cellulose in rice. |
| | + | ===Mutation=== |
| | + | * The osbc1l4 mutant exhibited a dwarf and less tiller phenotype. |
| | + | [[File:Os05g0386800-3.png|center|thumb|300px|'''Fig. 5 Phenotype of the OsBC1L4 and OsBC1L5 inserted lines.''' '' <ref name="ref1" />.'']] |
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| − | ===Expression=== | + | ===Expression === |
| − | Please input expression information here.
| + | * '''''OsBC1L3''''' and '''''OsBC1L4''''' have similar expression patterns, with highest levels in embryos and radicles after germination and culms 5 days before heading stage, respectively (Fig. 3d, e). |
| | + | [[File:Os05g0386800-2.png|center|thumb|400px|'''Fig. 3 Parts of the expression patterns of the OsBC1L family members in 25 different tissues of Minghui 63 (O. sativa L. ssp. indica)''' '' <ref name="ref1" />.'']] |
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| | ===Evolution=== | | ===Evolution=== |
| − | Please input evolution information here.
| + | [[File:Os05g0386800-1.png|right|thumb|250px|'''Fig. 2 Phylogenetic analysis of the rice OsBC1L family members.''' '' <ref name="ref1" />.'']] |
| | + | * To study the evolutionary relationships of rice OsBC1Ls with all the COBRA-like proteins functionally characterized so far from other species, an unrooted tree was constructed by MEGA3.1. The results revealed that all OsBC1L proteins fell into two main subgroups(Fig. 2). |
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| − | You can also add sub-section(s) at will. | + | ==Labs working on this gene== |
| | + | *X. Dai � C. You � L. Wang � G. Chen � Q. Zhang � C. Wu (&) National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, 430070 Wuhan, China |
| | + | *X. Dai � C. You � L. Wang � G. Chen � Q. Zhang � C. Wu National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, 430070 Wuhan, China |
| | + | ==References== |
| | + | <references> |
| | + | * <ref name="ref1"> |
| | + | Dai X, You C, Wang L, Chen G, Zhang Q, Wu C. Molecular characterization, |
| | + | expression pattern, and function analysis of the OsBC1L family in rice. Plant Mol |
| | + | Biol. 2009 Nov;71(4-5):469-81. doi: 10.1007/s11103-009-9537-3. Epub 2009 Aug 18. |
| | + | PubMed PMID: 19688299. |
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| − | ==Labs working on this gene==
| + | </ref> |
| − | Please input related labs here.
| + | </references> |
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| − | ==References==
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| − | Please input cited references here.
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| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0386800|
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| − | Description = Similar to Phytochelatin synthetase-like protein 2|
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| − | Version = NM_001061954.1 GI:115463638 GeneID:4338658|
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| − | Length = 3504 bp|
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| − | Definition = Oryza sativa Japonica Group Os05g0386800, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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| − | AP = Chromosome 5:18728123..18731626|
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| − | CDS = 18728518..18728810,18728931..18729211,18729303..18729462,18729860..18730316,18730601..18730680<br>,18731266..18731368|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008398:18728123..18731626
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008398:18728123..18731626
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| − | source=RiceChromosome05
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcggtggggggagccgggagctccagatccgtggcgccgtgctgctgctgcgccgtgctgctcgcggcggcgctgctcttctccgcgccggccaccacagaggcttatgatgcgctggatccaaatggaaacatcacgataaaatgggacgttatgtcgtggactcctgatggctatgttgctgtggtcacgatgttcaactatcaacaattccggcacatccaggcacctgggtggcagctggggtggacatgggcaaagaaggaggtcatttggtcgatggttggagcacagaccactgagcagggcgattgctcaaagttcaagggtggcacgccccactgctgcaagaaggatcccacagttgttgatctgcttccgggcaccccatacaacatgcaaatcgctaattgctgcaaagctggagttataaatacatttaaccaggacccatcaaatgctgcttcttccttccagatcagtgtaggtcttgctgggactaccaacaagacagttaagttgcctaagaacttcactcttaaggccccaggtcctgggtacacgtgcgggcgtgctatgattgtcaggcctactaagtttttcaccggggatgggcgcagagcaacccaagctctaatgacatggaatgtgacctgcacatactcccaatttcttgctcagaagactccttcctgctgtgtatctctctcatcattttataatgacacaattgtgaactgcccaacatgctcttgtggctgccaaaacaatgggacaagtcctggaagctgtgtaaatgagaattcaccttatttacaatctgccattgatggccctggcaaatggaccggtcagcctcttgtccaatgtacttctcacatgtgcccgatcagaatccactggcatgtgaaactcaactataaggaatattggagagtgaagatcacgattacgaacttcaactaccgcatgaattacacacagtggaatttggtcgctcaacatcctaacttcaataatatcacccagctgtttagcttcaactacaagccacttactccatatggaagcaagataaatgatactgcgatgttctggggagttaagttctataacgatttgctcatgcaagctggtccacttggaaatgcacagtcagaacttcttctgcgtaaggattccaaggacttcacctttgacaagggatgggccttcccacaccgcgtgtacttcaatggtgataattgtgtcatgccacctccggatgcatatccatggttgcctaatgcaagtcctctgacaaaacaaccattgacactctcggttttggtattttcgattgtgttggctactttgctggcttatgcatga</cdnaseq>|
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| − | AA = <aaseq>MAVGGAGSSRSVAPCCCCAVLLAAALLFSAPATTEAYDALDPNG NITIKWDVMSWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTE QGDCSKFKGGTPHCCKKDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQ ISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNV TCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYLQSA IDGPGKWTGQPLVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVA QHPNFNNITQLFSFNYKPLTPYGSKINDTAMFWGVKFYNDLLMQAGPLGNAQSELLLR KDSKDFTFDKGWAFPHRVYFNGDNCVMPPPDAYPWLPNASPLTKQPLTLSVLVFSIVL ATLLAYA</aaseq>|
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| − | DNA = <dnaseqindica>2817..3109#2416..2696#2165..2324#1311..1767#947..1026#259..361#gccttgcctggcggttggcgcgtcgcatctacccctgctactagtagtaccacttctcgcggcgagaaaatgccgcaatatatttgcttccaccgaggcgcagagcggaggagagtgacgagctgacgcacgcggcgcggcggaccagctcaatttgcctgccgctcctcgtcttccggtggggcggaggagggggacgccgggcgggcgggcgctcgcattccggagcggggagcgcgagctcgatcgggcggggatatggcggtggggggagccgggagctccagatccgtggcgccgtgctgctgctgcgccgtgctgctcgcggcggcgctgctcttctccgcgccggccaccacaggtttccccggctctcgctccttctctctctctctctctgtttgcgcctgccagctcgtgccgtgccggtctcagatccatgcgccggcccgatcgccgaggctctcgactaactttcacgagttgtgaccacgagatttgggcaatgcgatcccctcctgactgtgtcggtggctccagttcggtgtgtcggtggctttttttttttttttgaattccgattcgtttcatcagtaattcagttcgtttcgctcctgcttttgccagaattcttggagcagattaggtagcagtaattcagttcgtttcgctcccgcttgaccggattcttggatcaggttaggtagcttagatccattgagaggagcacgcatggagcttccttcccacactaatcagtgcccaaggtgatagatctgatcaggagaggcgaattcgaaaaaaaattcccttccagatcgaaatcgggatcacgatataactaactcatggggcttattcatctgccgaactgctaatttacccccatttcgtttcccttgttcaggatcttgatatgcaactcttttttgttttcctcttgcagaggcttatgatgcgctggatccaaatggaaacatcacgataaaatgggacgttatgtcgtggactcctgatggctatgttgtaagtagcaaccccacaccaaaaaatgcatcttgtattgttcgttcaaaaaaatccatctgcatcttgtttccccaactattattaggccataattttattttatttgatactactacaagttgtctttgaagtacaaagttgatagcataaccagcagctggtcagaaacatatgcagcaattaacaataataaacacgagttttatgtcagcatattatggatactctgattatcttgtatatgtgtgtcatgatttccccccaaaatgtttcttgtgcaggctgtggtcacgatgttcaactatcaacaattccggcacatccaggcacctgggtggcagctggggtggacatgggcaaagaaggaggtcatttggtcgatggttggagcacagaccactgagcagggcgattgctcaaagttcaagggtggcacgccccactgctgcaagaaggatcccacagttgttgatctgcttccgggcaccccatacaacatgcaaatcgctaattgctgcaaagctggagttataaatacatttaaccaggacccatcaaatgctgcttcttccttccagatcagtgtaggtcttgctgggactaccaacaagacagttaagttgcctaagaacttcactcttaaggccccaggtcctgggtacacgtgcgggcgtgctatgattgtcaggcctactaagtttttcaccggggatgggcgcagagcaacccaagctctaagtaagtagctcatctgttgttctttaatgtttaataccaattgctttcattctttgaggaaatgcatttgcagcctaaacaacaattgcatggttgaactaggttaccttatgtgtagggttagtaagaagatgtaatctgttgaagggaaagagattgttctcaaagtgagatgagtccaactgtgaataatagttgataataggttatattacttggcatgttggcctaatagaatacagctaattcagttaatattattctctagcaaataatattcgtcaaatgcagacatgcatcatagtggctccatatagaagttaaatttgtcaaaatcttataccataaagttcatttttgttttttgtttcttaacaaaaataaaatctgtttgcagtgacatggaatgtgacctgcacatactcccaatttcttgctcagaagactccttcctgctgtgtatctctctcatcattttataatgacacaattgtgaactgcccaacatgctcttgtggctgccaaaacaatgggacaagtcctggaagctgtgtaaagtgagttaataaaaccaaaactcttacttcgcttcttgttgaggcccaacttttctgcaaaattgctaacaagttccatgcatttccacagtgagaattcaccttatttacaatctgccattgatggccctggcaaatggaccggtcagcctcttgtccaatgtacttctcacatgtgcccgatcagaatccactggcatgtgaaactcaactataaggaatattggagagtgaagatcacgattacgaacttcaactaccgcatgaattacacacagtggaatttggtcgctcaacatcctaacttcaataatatcacccagctgtttagcttcaactacaagccacttactccatatggaagcaagataagtaagtcaatttacaaactgttctcctttatttaagaaaattggagtgcacttgtaatacgttcctttatctctctctctctctctctttctctgatgaagtttattccttctattttagatgatactgcgatgttctggggagttaagttctataacgatttgctcatgcaagctggtccacttggaaatgcacagtcagaacttcttctgcgtaaggattccaaggacttcacctttgacaagggatgggccttcccacaccgcgtgtacttcaatggtgataattgtgtcatgccacctccggatgcatatccatggttgcctaatgcaagtcctctgacaaaacaaccattgacactctcggttttggtattttcgattgtgttggctactttgctggcttatgcatgatgagtgaaaccaagaaattcggtgagcttcaagttgtcaggttccatggtgtgcactgcaacagatcatttgttcattcagttccacggttgcatagaagagaagatgtcacgctgaggaaagctgatatgtgtgtgtgtgttgtatgttaaaagaaggccaaaatgtatttcttttttggtatatatactggccacagcattttggtgaacttagttactgcaaactagataattacagttgcaccttttgtatgttatagcaaccagaaattcaattgaattatatgacttcccttcttgtagtacatgtatagactccgtaataatgttctgtatgattttgtgaacagaaaggatgctgttgattgagatcatttagttttgtttcttgtt</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061954.1 RefSeq:Os05g0386800]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
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| − | [[Category:Chromosome 5]]
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