Difference between revisions of "Os08g0151300"

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Please input one-sentence summary here.
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The rice '''''Os08g0151300''''' was reported as '''''OsMYB103L''''' in 2014 <ref name="ref1" /> by researchers from China.  
  
 
==Annotated Information==
 
==Annotated Information==
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[[File:104-Os08g0151300.png|right|thumb|327px|'''Figure 2.''' ''Subcellular localization and transactivation analysis of OsMYB103L.<ref name="ref1" />.'']]
 
===Function===
 
===Function===
Please input function information here.
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* '''''OsMYB103L''''' encodes an R2R3-MYB transcription factor.
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* '''''OsMYB103L''''' may target CESA genes for regulation of cellulose synthesis and could potentially be engineered for desirable leaf shape and mechanical strength in rice.
  
===Expression===
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===Phenotypic analysis===
Please input expression information here.
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* Expression levels of several cellulose synthase genes (CESAs) were significantly increased, as was the cellulose content in OsMYB103L overexpressing lines.
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* Knockdown of OsMYB103L by RNA interference led to a decreased level of cellulose content and reduced mechanical strength in leaves. Meanwhile, the expression levels of several CESA genes were decreased in these knockdown lines.
  
===Evolution===
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===Subcellular localization===
Please input evolution information here.
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* '''''OsMYB103L ''''' was localized in the nucleus with transactivation activity.
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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* State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
 
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* CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.
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* Department of Ecology, Peking University, Beijing 100871, China.
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* Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China.
 
==References==
 
==References==
Please input cited references here.
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<references>
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* <ref name="ref1">
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Yang C, Li D, Liu X, Ji C, Hao L, Zhao X, Li X, Chen C, Cheng Z, Zhu L.
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OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and
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mechanical strength in rice (Oryza sativa L.). BMC Plant Biol. 2014 Jun 6;14:158.
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doi: 10.1186/1471-2229-14-158. PubMed PMID: 24906444; PubMed Central PMCID:
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PMC4062502.
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</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
GeneName = Os08g0151300|
 
Description = Myb, DNA-binding domain containing protein|
 
Version = NM_001067532.1 GI:115474800 GeneID:4344665|
 
Length = 2820 bp|
 
Definition = Oryza sativa Japonica Group Os08g0151300, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:2947556..2950375|
 
CDS = 2947987..2948803,2949733..2949862,2950026..2950158|
 
GCID = <gbrowseImage1>
 
name=NC_008401:2947556..2950375
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:2947556..2950375
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggggcatcactcttgctgcaaccagcagaaggtgaagaggggcctctggtctcctgaggaagatgagaagctcatcagatacatcaccacccatggctatggctgctggagcgaggtcccggagaaagccggtttgcagcgatgtgggaagagctgccggctccggtggatcaactacctgagaccggacatccggcgagggcggttcacggcggaggaggagaagctcatcatcagcctgcacgccattgttggcaacaggtgggcccacattgccagccacctgcctggccggaccgacaacgagatcaagaactactggaattcatggatcaagaagaagattcgcaagccggcggcggccgccgccgcggcgaccacgacgagcccgaacaacccgccgccgtgcagcacggcgacgtcggaccaccaccacctgccgccgccggcgttcggcggcgctgatcaccacctgcagctcgacgccatcatcaaccagaacctgatatcatccctgccgccgaagctcgccaccggcgacgactcgccgccggcggtgcccgggctgccgcaccactgcccgctcttcatgttcgacaccaccaccaccggcgccggcggcgccatcagcccgccgccgccgtcatcactgatcccaacccacctccaccaccaccaccacccgttcatcgccagcttcacggcggcgatggccgccgacacgccgagctacctgcccccgctggtcgacggcatggcagccatgggagcggccatggattgcagcttagaagatggccaaacagccgccgccatggccgccaccaatggctactaccagcatcatcagaagcatcagcagctggagattgagctggaggaggaggagcagaggcagctagggcatcatcatcatcagcatcaccatgagcatgagcatgaaaatcatcagtgggatgaagaagaagcacagcatctgctgatgtgggatcaagaagtactaacatcatccaacttggaggccatgcaaagtggtgctcattccctcctttttatgggaccaaatgaccatgattaa</cdnaseq>|
 
AA = <aaseq>MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA                    GLQRCGKSCRLRWINYLRPDIRRGRFTAEEEKLIISLHAIVGNRWAHIASHLPGRTDN                    EIKNYWNSWIKKKIRKPAAAAAAATTTSPNNPPPCSTATSDHHHLPPPAFGGADHHLQ                    LDAIINQNLISSLPPKLATGDDSPPAVPGLPHHCPLFMFDTTTTGAGGAISPPPPSSL                    IPTHLHHHHHPFIASFTAAMAADTPSYLPPLVDGMAAMGAAMDCSLEDGQTAAAMAAT                    NGYYQHHQKHQQLEIELEEEEQRQLGHHHHQHHHEHEHENHQWDEEEAQHLLMWDQEV                    LTSSNLEAMQSGAHSLLFMGPNDHD</aaseq>|
 
DNA = <dnaseqindica>1573..2389#514..643#218..350#aagagaaggtagctcatgcatattaaaagggctaaacaccaaccaaaccctttgctcctccatgacaacaatgtcatgttgctagcagctagatcaagaatatattcaagatagttaattgctgcatataggttttgcaagttgcagaacttgcagctatattgttgttacactagctgttcatatcttggattccagtgatatctagagtgcatgcatggggcatcactcttgctgcaaccagcagaaggtgaagaggggcctctggtctcctgaggaagatgagaagctcatcagatacatcaccacccatggctatggctgctggagcgaggtcccggagaaagccggtacgccgcatatcgtcgatcgatcgattaatcccccaatatcttgattgattgatgaacattcaatgagatggatgaactatcattgcttgattgatgaacattttcttgaggaactgatctgtcaattgctgaattgtgtgcaatgtggtggtttgtgaaggtttgcagcgatgtgggaagagctgccggctccggtggatcaactacctgagaccggacatccggcgagggcggttcacggcggaggaggagaagctcatcatcagcctgcacgccattgttggcaacaggtaggttcttgcatgcagcagcagcaacacgatgatcagttagttcatggtgaccttattattagtacctaccaagtactacctaatcgagctataattattcttctctaaattcttgattaatttcgaagattccccaattcccccaaagtagagatatgcatggcatttgatcaaattttgctgtttttcttgcaatttgatgattgcattacatcctaggctcagctaattgactgatattatctagaaaaatctgtttgaatgatgtgttactgttcttcggcaatgacgactatctatctccattgctgccctgtcatcaacaattgctgtcgatgctcctattcttctgaatttttttcctccttttgcttcattttcagttcactgtaatatcgatttaacaatcgataatcccgtcagtgacacatcacatgacaaaagtgatatgaaatttcctcaaaagataattaaaggtgattctgaagtgtcctagtatggtacttatatatggccctcagagcttgattatgctaattttcccaagatttttcgatttttctccgttaaaattaagttgaaaggagcaagtcatcatgttgacgtcaagcatgacaaatcgtattagccgtcgttttctacttgtttagcttgaacacgacgattataacaaatcaagccgtacatgagagtagcattacttctaaacaaagggttccaaattaagtgtacatacagcatcacacaactatattatattcttgaattcaatatatatacatagtatatatatctatagtaccaacttgattgatcattagtcgcatgattaatttgaccaagatatgatggtgtgtagtatcagtatataaaccatagagagaataattaactaattataattaatgttgttgtctctctgacaggtgggcccacattgccagccacctgcctggccggaccgacaacgagatcaagaactactggaattcatggatcaagaagaagattcgcaagccggcggcggccgccgccgcggcgaccacgacgagcccgaacaacccgccgccgtgcagcacggcgacgtcggaccaccaccacctgccgccgccggcgttcggcggcgctgatcaccacctgcagctcgacgccatcatcaaccagaacctgatatcatccctgccgccgaagctcgccaccggcgacgactcgccgccggcggtgcccgggctgccgcaccactgcccgctcttcatgttcgacaccaccaccaccggcgccggcggcgccatcagcccgccgccgccgtcatcactgatcccaacccacctccaccaccaccaccacccgttcatcgccagcttcacggcggcgatggccgccgacacgccgagctacctgcccccgctggtcgacggcatggcagccatgggagcggccatggattgcagcttagaagatggccaaacagccgccgccatggccgccaccaatggctactaccagcatcatcagaagcatcagcagctggagattgagctggaggaggaggagcagaggcagctagggcatcatcatcatcagcatcaccatgagcatgagcatgaaaatcatcagtgggatgaagaagaagcacagcatctgctgatgtgggatcaagaagtactaacatcatccaacttggaggccatgcaaagtggtgctcattccctcctttttatgggaccaaatgaccatgattaagttggtaataataacctatgtctaccccccccccaattttttttctttttgggaaaaaaaaacttgcatgtgcatattttgcatctcacaacatctgatcccatctctgatctgatcttgatctccctttgatcaatctagctctcactactaccccatctgatctgtctatacatgaaataatgaggttttgcaaattaaaggcgcgcgtaatttattgtgttttggattttttttctatctctctccaagagcttttattttggtttttttacttttttttttggattggagtgtgaagactgaatagtgtgtgtcaattgggttttttgtaaagagaccaccttgtatgagtgcatggcatggcactttggagtgtgtaatttgattgatgtatctaagtgaatttataataaacacaggaggatgac</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067532.1 RefSeq:Os08g0151300]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 13:35, 17 October 2016

The rice Os08g0151300 was reported as OsMYB103L in 2014 [1] by researchers from China.

Annotated Information

Figure 2. Subcellular localization and transactivation analysis of OsMYB103L.[1].

Function

  • OsMYB103L encodes an R2R3-MYB transcription factor.
  • OsMYB103L may target CESA genes for regulation of cellulose synthesis and could potentially be engineered for desirable leaf shape and mechanical strength in rice.

Phenotypic analysis

  • Expression levels of several cellulose synthase genes (CESAs) were significantly increased, as was the cellulose content in OsMYB103L overexpressing lines.
  • Knockdown of OsMYB103L by RNA interference led to a decreased level of cellulose content and reduced mechanical strength in leaves. Meanwhile, the expression levels of several CESA genes were decreased in these knockdown lines.

Subcellular localization

  • OsMYB103L was localized in the nucleus with transactivation activity.

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
  • CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.
  • Department of Ecology, Peking University, Beijing 100871, China.
  • Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China.

References

  1. 1.0 1.1 Yang C, Li D, Liu X, Ji C, Hao L, Zhao X, Li X, Chen C, Cheng Z, Zhu L. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC Plant Biol. 2014 Jun 6;14:158. doi: 10.1186/1471-2229-14-158. PubMed PMID: 24906444; PubMed Central PMCID: PMC4062502.

Structured Information