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| − | {{JaponicaGene|
| + | The rice '''''Os09g0368500''''' was reported as '''''Polyamine Oxidase 7 (OsPAO7)''''' in 2014 <ref name="ref1" /> by researchers from Japan and Germany. |
| − | GeneName = Os09g0368500|
| |
| − | Description = Similar to Polyamine oxidase precursor (EC 1.5.3.11)|
| |
| − | Version = NM_001069546.1 GI:115478834 GeneID:4346882|
| |
| − | Length = 10242 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0368500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | [[File:105-Os09g0368500.png|right|thumb|427px|'''Figure 1.''' ''Subcellular localization of OsPAO7–GFP protein in onion epidermal cells.<ref name="ref1" />.'']] |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | ===Gene Symbol=== |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *'''''Os09g0368500''''' '''''<=>''''' '''''OsPAO7,PAO7''''' |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| + | * '''''OsPAO7''''' belongs to clade II, which includes maize and barley PAOs |
| − | AP = Chromosome 9:12771438..12781679|
| + | * '''''OsPAO7''''' seems to remain in a peripheral layer of the plant cell with the aid of its predicted signal peptide and transmembrane domain. |
| − | CDS = 12771586..12771681,12771835..12772092,12772170..12772319,12772437..12772580,12772727..12772982<br>,12777705..12777851,12779396..12779645,12781545..12781668|
| + | * Recombinant '''''OsPAO7''''' prefers Spm and Spd as substrates, and it produces DAP from both substrates in a time-dependent manner, indicating that '''''OsPAO7''''' is the first TC-type enzyme identified in O. sativa. |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008402:12771438..12781679
| + | ===Expression=== |
| − | source=RiceChromosome09
| + | * '''''OsPAO7''''' is specifically expressed in anthers, with an expressional peak at the bicellular pollen stage. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | ===Subcellular localization=== |
| − | GSID = <gbrowseImage2>
| + | * Subcellular localization analysis showed that '''''OsPAO7''''' localizes to the peripheral edge of the plant cell |
| − | name=NC_008402:12771438..12781679
| + | |
| − | source=RiceChromosome09
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atgacgaagcccacgacgatggccatttttctttctatagtgctactatccatggcacagcttccctctctcgtcgccggcaccggccggccaagggtcataatcatcggcgccggcatatccggtatttcagcggggaagcggctgtcggaggctgggataacggacatattgatcttagaggcaacagaccacattggcgggcggatgcacaaacagaggtttgccggcgtcaatgtggagatcggcgccaattgggtggagggcgtcaatggtgagaagatgaaccccatttggcccatcgtcaactccaccctcaagcttaggaacttcctctccgacttcgacagtcttgcccaaaacgtctacaaggacggtggcctctgcgacgcagcatacgtgcagaagagaatcgacctggctgatgaagcggataagagtggggagaatctctccgccacactgcacccaagcggccgggacgacatgtcaatcctttcaatgcaacggctcaacaatcacctgcccaacggcccgtcgtcgccggtggacatggtggtggactacttcacctacgactacgagttcgccgagccgccgcgcgtgaccagcctgcggaacaccgttcccctcccgaccttcaccgacttcggagacgacaactacttcgtcgccgaccaacggggctacgaggccgtcgtctactacctcgccggccaatacctcgaagccgacaagtccggcaacatcgttgacgctcgcctgcagctcaacaaggtggtgcgtgagatctcctactcctcgaccggcgtcaccgtgaagacggaggacaactcgacgtaccaggcagactatgtcatggtttctgcgagcttgggagtcctgcagagcgatctcatacagttcaagccacagctgccttcttggaagattcttgcgatctaccaattcgacatggccgtgtacaccaagatattcgtcaagttccccaagaaattctggcccgaaggggcagggagggagttcttcctctacgcgagcaccaggagaggctactacggagtctggcaggagtttgagaagcaatacccggatgccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccggacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggacgtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggcagcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctcagggcgccggttgggagagtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatcttgcaggtatctatgcctaa</cdnaseq>|
| + | * Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba, Sendai, Miyagi, 980-8577 Japan |
| − | AA = <aaseq>MTKPTTMAIFLSIVLLSMAQLPSLVAGTGRPRVIIIGAGISGIS AGKRLSEAGITDILILEATDHIGGRMHKQRFAGVNVEIGANWVEGVNGEKMNPIWPIV NSTLKLRNFLSDFDSLAQNVYKDGGLCDAAYVQKRIDLADEADKSGENLSATLHPSGR DDMSILSMQRLNNHLPNGPSSPVDMVVDYFTYDYEFAEPPRVTSLRNTVPLPTFTDFG DDNYFVADQRGYEAVVYYLAGQYLEADKSGNIVDARLQLNKVVREISYSSTGVTVKTE DNSTYQADYVMVSASLGVLQSDLIQFKPQLPSWKILAIYQFDMAVYTKIFVKFPKKFW PEGAGREFFLYASTRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQPDSQTKAE IMEVVRSMFPDEDVPDATDILVPRWWSDRFFQGSFSNWPIGVSRYEHDQLRAPVGRVY FTGEHTSERYNGYVHGAYLAGIYA</aaseq>|
| + | * Faculty of Pharmaceutical Sciences, Josai University, Sakado, Saitama, 370-0290 Japan |
| − | DNA = <dnaseqindica>9999..10094#9588..9845#9361..9510#9100..9243#8698..8953#3829..3975#2035..2284#12..135#tggaagagagtatgacgaagcccacgacgatggccatttttctttctatagtgctactatccatggcacagcttccctctctcgtcgccggcaccggccggccaagggtcataatcatcggcgccggcatatccggtacgcacacaagtacttttaccgtcggtgatatctacgtcactcagtattctaagtttaccgtctacgtcactcatagtattctaagtgttactaatagaaatgatgttagctgtaatttatgaatttatatcacacatgttacatgttgttactcccttcgtcttagataagggagtgtgtattttatggctggtgcccaatatgcaagatgtaattttagtttgattcactatcttcctagattaccctttcataatgtgtatgcatgcaaactgccacaacctatacacgcagaaagcatgtgggcatgcaaaccaaccaggcataacactaactcactccttaactaaagccttagaacgctagcatacccaactgatacccacaaatctatctctaaaattatatttttgggatttataatttaattttaaggtgtaaatagatttttatctctaacatatatcttgaataaactcataataataaaaagtagacaaactcctaattaccaacatatacataaacaaaaatcgctctgcatatcatctccccacgcgcaatctctctctatgtgccaccctctccttttgttgtgcggaaatttggagtgagagtgtctctcaacctgtgaagagcaaaaaaggacaaggtgattctaatttttcggataaatatttaacactaccacataaatgattttcccatatggccaaaactcattattgttggcgggtggagcacctacctggagccaggtatctgcaaagaaaggcacttccccatgtggttgcaacaactgcatgcaaaaatgcattcttgcagtcaggcgtcttaaggaggccgcatgtaaagacctgatttttgcatgcaatcaagtaaggatgtctgactacaacgattttcaataataataataataataaagaaaaaaaaaatccaaaaccctagatcaggcactgccgccacaggcgtgagtccgccactaccaaggctgcgccgttggatccgtgaggaagaggaccactgtcgtcgtcatcgatgcagtccgctgcctgccgttgtcaacatcgcgaccccaccgcacccaaagccagcggcggtggatccaagagggagagggccaccgccgctagatccgttagagagagggccctaccgtcgtcgccattgataccccgccgcaccagaggccacctgtccgcctgtcctgaggccgttgccgccggatccgtgagggaggagggcccccgccgtaggatccggctaggagagggcccccactgttgtcgtcatcgataccccaccgcaccaaaggctggtggcggatccgccctcccgaggctactaccgccggatctgcaagggggatggcccctactaccggatccacgcagggcagggtcgctaccatcggatccatcgaggaggctacgccgctgccgccgttgacgtgcttccccgccgtcatcatcattgatatcctgcagcaccagaggccaccgctggtagatgcacccctctcgaggcttccgccaccagatccgtaaggaggagggccgccgccgaatccgccgaggaggctacgccaccgctgctgtccacgcacgcctctcctccaccggcttcagttttagaattaggtttatttaaggatattgttggtcatgctcttaattcactctctccttgatattaggaaaaaaaattaggaaaaaaaagtgcaccctctaattaacgacgaagggagtaatttatgcagaagctataagaacaattatagtcccatagatgtgtgctggtaacccaggtgcttgctttaaatcctgatcttcatacataaactaagacgacatatagttctatatagatgtacatctatgttgtgttgtgcaggtatttcagcggggaagcggctgtcggaggctgggataacggacatattgatcttagaggcaacagaccacattggcgggcggatgcacaaacagaggtttgccggcgtcaatgtggagatcggcgccaattgggtggagggcgtcaatggtgagaagatgaaccccatttggcccatcgtcaactccaccctcaagcttaggaacttcctctccgacttcgacagtcttgcccaaaacgtctacaaggagtacgtacattccatgagtgggtggatcgattgaaataattaaaactcgacacatgattaattatacagatttctctaaaaacatattttgcacatatttacgtgtgcgcatcatagtaatagacaagcactaatcatctgccaattccaatctgtcaccgctgttggtttgggaaaaaaagagagtaattaatgcccagttgtcagaagtactccacctattcacctttcatttatcaacaagagagagactaataaaaaaaaactttttgcggcccatgaaatggaatagtatacttctaaataaattaaaatatatatgcaacttctaactagaaatttgaaatgttaatgaaaatttcaaaaagagactgaaaaactttcaaaatgcaaagtttctgttgagattaaaactttcatatcattaaatattaaaatggccataggtaactgttttggacatccatatttgtcatttaaacagtatagttttgaacattaacttctactcggctgctagctgcgagaaagttatataaaaagaaattacgttatatatatagaattttacttcacatggtttggccaaataacatataaataaaacctccaattatagaaatataaataatgtagccatataagaaaaaaataaataatagatcgatgatctaaacatgaaaaataatttgaggaaatcctccaatgctaaaattatagacaatgtagcttccgtaagagagaagagataatagatcgggtccaaatgctgaaaataatttgaggtaattgtgatagaaaaagctagaaacaaaagatggtatgcattaattggaacagattcatgcagggtatgcaatttcggtaacaccgaaatttttgtggttgccaaaatttaaaaaaaatcatggatttcagtgtttttttaccgaaattatttaaaaatttaacatcttttgacttaattgaaacaaattttgatcaaattcataaatatttgaaaaaccaaaaattccagaggagatttgtgcttgttggtacggtctgaaattaccaaaatttctaaaatttaaaaccgaaattgcaaaccatggattcattgagaggagatggcaatttgcatcatgcataagtgatctaaaggctagaaacagatgaagtgacgtggcttaattagagaagataggattagcattatcttaatggagattcaactttgttagaataaatcaataaagtcaacgtataacaaacaaaatataaatttaagttttgatctttcgaaaaatagtagtacatatactcagacaaattaacgcatatggatatatacccaagtttcaactagggtacatatatatgttcaaaccgatgaatgtttgtgagtgacatgaatagattttacagcaaaacttaattaattgtgttttcagacaatagaaacaaactatgcatgcaaatatattattgcatccaaaatatatatatcctactagcatacatatgcatgttgcattatattgcctgaagttgaataatttcagcggtggcctctgcgacgcagcatacgtgcagaagagaatcgacctggctgatgaagcggataagagtggggagaatctctccgccacactgcacccaagcggccgggacgacatgtcaatcctttcaatgcaacggctcaacaatcagtacgtgcctttgccgctcaagtctttacttaaaaataaaatttaagcacttagaaaacacttcaaaagctatttgaattgatcattcatgtatttcaaatagtagctccaaaacaaatggaatttgcttaggcttgtgggcctctgaaaagttgtaggcttgtgggtttaggcccaaaatgaaactaataaccagtctagcagatacagagatacttcctcatgcaggaatgaatacgaaaccaatctatctatctattatctattattatttactaaaaatccatgaaacttcctacaaacactcataagccgccacgtggcactcctacaaacgctcctaaaccgtcacatggcacttttaatctaaccgtcgattttcacttaaattggtggacccactgttttagactattagattagatctatttagaaaagtcccagcttcatcgaaattataccagaaaaattaatgtacataccggatataaaccttccgtattgttctcttaaaaaaaccaaacagacgtatacgtacgtacgaagattaaaaaaaaaccaaaaaaccatatgtatgccgtaagaacaatacggtctttcgaatatagtgtagtacgtattgtgtatgcctttctctgttttttatttatcaatgaacagcaagtacatacttaagacttatctatctatccaccgtctttaaaataggatttcctatattataaaataaaatttattactccacaaatatgcactgttaaactagattaatataaagtaccaaatcaactgtctttaaatgttcatcttttaaattatttctcaaatatatatctaacttataatcctttgtctttctttaattaaataaaatactaatcacttataatcacttataatagttatatgttatatggaactgctaaattcattacgacacatggtgccaacatataatacgtaatgtgataattatttttcaaataatttagttaacatataataactaatgtcatgatcatttttaaaataatttcacatgacaaaaatgatcaacttggtgtcaaattcgcttgacaaatatataacactaattcaaatctacatgcagaaaaagtgaaacaacattgtggtttacaatcagatttgattttattttaatttatgtgatattgagattctcttttttttaaaaaaaatagaactatttgatgggaatttccaggcaaagaccttgctatattacgaccccttaatccatcaggagaattacggtcatatattgtttttctttgcgaaattggtttggtaacaaatgaaaaatcatttgcatcaaactattcatcatatattttttatactttagaaattctaatatatcaaacataattgatgatgtatgtcatacaccccactgaagtaactataaatgcactccaacaaattagttactttaaataattttggaaaatatattcttagaattagtaaagatgtcacatgtaattatgaacaatacatgaatgaaaacaaactgaagctaaactatatatcttagtcaaaatataaagaacaatatggtactcctagatgtcacggtcgtatgtctgtttagttatattttttttatcaaccttgctcatctgaaaagagaatattgtatctacacaataaaaaaaaagcattactgattaataccatgcacaattttgtctacacaaaactatgaaaaaattcactagggaaatattttcatcaccaacattccctcttttttttcccataaagggcaccaagcatgctgtgctaccacaagtgtagcaaatgtcatacatatggttgagttgaagccaccccggcaaaggccactattgacaatagtgtataactttgtacttactgatgcaattatctatgagggtgctgatagtgaactagacattaaaattatgcttcatgctggcattgcggggcataactatgtcgactcaagacctatgtttaaaggcagtggagaaataaagcctcgacagatacggttagcttcacccattaaaggggacattcatatatgattttaacggtcatcaaagttaaaaaatcttataaattataagaaaaaaatgatcaacggtttacttaaattatttagaaaaaaaatagaaaaataaagtccccaaaacctcgtcctccccggcacatgcacaaaacattgccggtccccttcaaccttggctcatgctctccgctctccattcctcccccttcctatgaataatactgaaaagaccatatttttaatatatacataacatttctaatctaattattgctctgttaaataattaaaccaacaattcttgatccataatgcctatatttttaatctaaaataagacttgtataaaataaaatagaaaagtagaaaaaaagtcaatagggattgaatcaaatcaattagagagaatatagtaataaatttctgaaaaatagaaaattggaacaaccattgtatgttccattgccataaccatccatctatcgtggtattatgagtttctcatatattattgcatatataagacatactaaggtagctggacgtagtagtacttagttggttaaaaagttatatatatatgctactatcaactttaaatttaggactcatgttgcctagggttttttttaaaagaacaccataaatcacatatataaaagggaaaggacgcgtaaaatatatatatctcctatgtatttattgtctcattctttcaagaaaataaagaagatcattgataattgcttatagtaatgaattaaatattatatagttcaaaccttacaaatgtcttgtaaaaaattatctaagcaatagcgatgaagaaaatttataaagaaatactccctccgtcccaaattataccaactataatcaaactcggtaccttttaactaataatcatactaactatatctaagtattatgcatgttacatcactagatttatattttgaagtactttcatgtgatgctaatttcatatttgttgggatagaatggaataaagtactggtcaaaatatgttattaaaacctgtgtaaaaaaatataggtcttataatttgagacagagggagtagtatttttcaagcatagcaggtattgtccgattgatactccatcatccgattgatattcccagtgtaacctactttacatgcccacgcgaatgcgcgggctaccttcctagttctaccagaaagggtaaatgatagtaccagaaaaccaaatctcttttaactaaaatagcccttaaacctcacgaagtttggtctgactgatgtatatgcgcgtcagtctgactccgtagtcctgctgatctaatcaccgtgtgcgatgaatctgcctgcctactcgtcaccgctggttaaaccgcccgtcgagtagaccgcttgtctgatgctggtctgaccattgagatccaaaaaaaacacgtctcgacaaaactcttaaaagtagatcaaccgtattgtatcaaattgtgtttacaaatcgcatctaaagcactgctctttcacctcatgtactagagtcaaagtctcaaagcaagaactaacttttctcccttaaaagtcgatatactcctaatatcaacccctcgcctatttatacataaaacatagctgtacctagccatgaatcctactggaactaggaatcctaatcacacaaaaaaacccctctcgaaccaggaaaacaacatccctatacaacaccaaacttctcaaacttaggctctaatctaaatttgactctactttccatacacacacaacaccacgtgtatgccataagagaactcatgtatattgttctctagtctgagcatctcgcatgatctcgttgatcatttgtacctcaagtaatgcaaaatttcatatccaagcacaagttcacaccaacttgtctcacatcatcatgcaaatagtatcacatatgtatctaaaccatttagaagtcatgaatatgaaccgattttaaaaatcgacaaaaccaacctgaacatagatgaaaaaccgaaaacattattcgtcgtattttcacatatacttatctttgacaattatttttcaccaagattacatcatcacatgatttcacacctccaaattttaatatatgatgccattggcattgttagatacttttggttgtccatattaattttgttattatttgatttgtcaataaatatttttaagcatgactgatatgttttatgcttaaaatttttaaataagacgaataactaaatgtcaacggcaacgtatattaaaaaccgatagagtttttttggccgggccagtggacggcgtcggccaatgtattaagcatgggaaagaaaaacattttacaaacaaacaacagtcactgctgtcgggaaactagaacatacaccggtagtaggctgggttaggccagagactaaatatataactggcccgcctgacagatagtatacaacatacttctatgtaaaacaacttaattctaaagatgtatctagataacgtgtatgtccaaatacaagctcagaaatggattagaattaaaaaaaattttaaagatagagggagtagtacaatagttgtacaagctgtgattcagtctctctgttcttctgggtggtggtggcgtgcaaatccatgaaatggccagcctgcccaacggcccgtcgtcgccggtggacatggtggtggactacttcacctacgactacgagttcgccgagccgccgcgcgtgaccagcctgcggaacaccgttcccctcccgaccttcaccgacttcggagacgacaactacttcgtcgccgaccaacggggctacgaggccgtcgtctactacctcgccggccaatacctcgaagccgacaagtccggcaacatcgttgacgctcgcctgcagctcaacaaggtggatcgatcacttctgtttctgtaactcatctcgatcagctcctgcgctaatgctacgattgttttcgtaattggtcttttctgtcagaaaagatgaactgattaagcacgcgatcatcatggtggtatatatgatcgatgcaggtggtgcgtgagatctcctactcctcgaccggcgtcaccgtgaagacggaggacaactcgacgtaccaggcagactatgtcatggtttctgcgagcttgggagtcctgcagagcgatctcatacagttcaagccacagctgcctgtcagtttctatgtccaaatgtccttgcatgttcaacatatcctcttccaaatataaattaagatgtgcatatcgagcagtcaaatttactttacgtttcttgcatgtttccatcagtcttggaagattcttgcgatctaccaattcgacatggccgtgtacaccaagatattcgtcaagttccccaagaaattctggcccgaaggggcagggagggagttcttcctctacgcgagcaccaggagaggctactacggagtctggcaggtacaaaatatgcagcaatatatacaatccactcacatcgaattgtagtacattgcgatgatctgaacattcttcaggagtttgagaagcaatacccggatgccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccggacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggacgtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggcagcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctcagggtacgagctgttactccaaccaaatgctaatcgcaattcactacagatcatgtttttcattgctactttgatgtttctttggtcatgaacaaatgaggtttaaatttgagcttaatttggttttgtgtatgttttgctgtttctgcacacaaggcgccggttgggagagtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatcttgcaggtatctatgcctaatttgttagcctatgtctctaatgttagagagaccggagatgtaaaccatttttattgtcttaaaaaaatacctgctctagtgattgacgagatttgtaatgctaatatttgtgctttattatgtgctgtgcctttgcttgtttttgtc</dnaseqindica>|
| + | * Shokei Gakuin University, 4-10-1 Yurigaoka, Natori, Miyagi, 981-1295 Japan |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069546.1 RefSeq:Os09g0368500]|
| + | * Biodiversity and Climate Research Center, Laboratory Centre, Georg-Voigt-Str. 14–16, D-60325 Frankfurt am Main, Germany |
| − | }}
| + | ==References== |
| − | [[Category:Genes]] | + | <references> |
| − | [[Category:Japonica mRNA]]
| + | * <ref name="ref1"> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | Liu T, Kim DW, Niitsu M, Maeda S, Watanabe M, Kamio Y, Berberich T, Kusano T. |
| − | [[Category:Japonica Genes]]
| + | Polyamine oxidase 7 is a terminal catabolism-type enzyme in Oryza sativa and is |
| − | [[Category:Japonica Chromosome 9]] | + | specifically expressed in anthers. Plant Cell Physiol. 2014 Jun;55(6):1110-22. |
| − | [[Category:Chromosome 9]]
| + | doi: 10.1093/pcp/pcu047. Epub 2014 Mar 14. PubMed PMID: 24634478. |
| | + | </ref> |
| | + | </references> |
| | + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
