Difference between revisions of "Os05g0116100"

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Please input one-sentence summary here.
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The rice '''''Os05g0116100''''' was reported as '''''OsDHAR1''''' in 2013 <ref name="ref1" /> by researchers from South Korea.  
  
 
==Annotated Information==
 
==Annotated Information==
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[[File:119-Os05g0116100.png|right|thumb|427px|'''Figure 3.''' ''Comparison of agronomic traits between TG and WT rice plants under normal field conditions.<ref name="ref1" />.'']]
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===Gene Symbol===
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*'''''Os05g0116100''''' '''''<=>''''' '''''OsDHAR1,DHAR1'''''
 
===Function===
 
===Function===
Please input function information here.
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* '''''OsDHAR1''''' overexpression, capable of functioning in AsA recycling, and protein folding increases environmental adaptation to paddy field conditions by the improving AsA pool and redox homeostasis, which enhances rice grain yield and biomass.
  
===Expression===
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===Phenotypic analysis===
Please input expression information here.
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* At the middle reproductive stage, OsDHAR1-expressing Transgenic (TG) rice plants (OX1, OX-2, and OX-3) displayed a better phenotype than WT rice plants (Fig. 3b).
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* In addition, the total length of the TG rice plants was less than that of the WT rice plants, whereas the number of panicles of the TG rice plants was higher than that of the WT rice plants during vegetative growth (data not shown) and the harvest stages after flowering (Fig. 3c).
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* As shown in Fig. 3d, most of the yield parameters, with the exception of 1,000 GW (TOGW), was increased in OsDHAR1-expressing TG rice plants (OX1 to OX-7) when compared with the WT rice plants.
  
===Evolution===
 
Please input evolution information here.
 
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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* Department of Biology, College of Natural Sciences, Kyungpook National University, Daegu 702-701, South Korea
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* National Institute of Crop Science, Rural Development Administration, Suwon 441-857, South Korea
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* Subtropical Horticulture Research Institute, Jeju National University, Jeju 690-756, South Korea
  
 
==References==
 
==References==
Please input cited references here.
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<references>
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* <ref name="ref1">
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Kim YS, Kim IS, Bae MJ, Choe YH, Kim YH, Park HM, Kang HG, Yoon HS. Homologous
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expression of cytosolic dehydroascorbate reductase increases grain yield and
 +
biomass under paddy field conditions in transgenic rice (Oryza sativa L.
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japonica). Planta. 2013 Jun;237(6):1613-25. doi: 10.1007/s00425-013-1862-8. Epub
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2013 Mar 22. PubMed PMID: 23519921.
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</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
GeneName = Os05g0116100|
 
Description = Dehydroascorbate reductase|
 
Version = NM_001061005.1 GI:115461740 GeneID:4337622|
 
Length = 3491 bp|
 
Definition = Oryza sativa Japonica Group Os05g0116100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
AP = Chromosome 5:854992..858482|
 
CDS = 855468..855554,855651..855791,856136..856253,856769..856915,858148..858238<br>,858346..858403|
 
GCID = <gbrowseImage1>
 
name=NC_008398:854992..858482
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008398:854992..858482
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgggcgtggaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactgtccattctcgcagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctcatcgacgtccagaacaagcccgactggtttctgaagatcagcccagaggggaaggtgcctgtgtttaacggtggtgatggcaaatggattcctgattctgatgtgatcactcaagtcattgaggagaagtacccaaccccgtctcttgtcacccctcctgagtatgcatcagtgggatcaaaaattttctcatgcttcacaacgttcttgaagagcaaggatccaaatgatggttcagagaaggcacttcttactgaactgcaggcactcgaggagcatctgaaagctcatggcccctttatcaacgggcagaacatttcagctgctgaccttagcctggcaccaaagctctaccatctccaggttgctctggagcatttcaaaggctggaagatcccggaagacctaaccaatgttcatgcttacacagaggctctgtttagccgcgaatctttcatcaagacgaaggcagctaaggagcacctgattgctggatgggcaccaaaagtgaatgcgtaa</cdnaseq>|
 
AA = <aaseq>MGVEVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDV                    QNKPDWFLKISPEGKVPVFNGGDGKWIPDSDVITQVIEEKYPTPSLVTPPEYASVGSK                    IFSCFTTFLKSKDPNDGSEKALLTELQALEEHLKAHGPFINGQNISAADLSLAPKLYH                    LQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKTKAAKEHLIAGWAPKVNA</aaseq>|
 
DNA = <dnaseqindica>2929..3015#2692..2832#2230..2347#1568..1714#245..335#80..137#gccgccaatagctcgccgccgtcgaaacccaaaatcttctcttcccgtacgtgagaagcgccaggtcgtcgtcgccgccatgggcgtggaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactgtgagtgccaacccccacctcgccggatccgcctcccccggcgtccccatttcgaaaccctaattttggttcttcccctcctcctgtgtggcgtgggtggctggcaggtccattctcgcagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctcatcgacgtccagaacaagcccgactggtccgtcccctctccttccccccacactctgaattgaatttcgctttcctttcctgtgagatgtggactgaacttgtcgtaggcgttaactttgggggctcttttttctctactgttttgacttaattgtcagatgtttagtgctgctagtggagtagaaacagtgccacagtgaggaacgaggggtttttgtctgtctgtatcaccatgagttataattgtttggatccctgaattatgattgtttgatgaactactggttacacactttctttgctgtctctgatttacaatttgctgaattgtgatcctgcttcagattgtaagttgcgctgaaagttgaaaaacaatcttttcttattactagtcttgaacatgccttatattaggaagtacacgaagcaattaatattttctctctgtaaattaatcaccggaactaagattgtaagttgtaacgtaaatttgtttagattgatgatattgcggtcataatgtcttgtatcagttaatagccctttattttgctagtttttcataccgtcttgagttatgtagatgtgcttttgttgggatctctatgtgcatcaagaaatgcatgtatgccttaagttctagtccttcgatgggtctgatgtttggtcaatatctagatttgggcggtttatccaaacccaagtggggtaaactgaagatcttatagtgctcactatggagagcaaccaaaatcaacagtcttaatcctcagcaagatatagaatatgagcagaggccagagcaaaaggatgcctctaacttagaaatgtccatcagctacttaactgtaaagagtaatttggtgtttctttgttttactctttacatgatgattcagtaaaattattctttcatttctcttccactttatctgtaaaagaaaacgaaaacgctaatacttttcaagttatgtacctttctagtgtaaattctggtgttttttgttacctgttagtgctttagagaagatgcacctttttggaggaagagtgaagagatgaactaatggatgttcgcatgttttcatctggaagtagttaattatactatttccctgactttagttctattaatatttaatgaagtactgaaatggtatttgaggggatccaagggtttaatgtagtctctttgaacttggagcttcccactgcttgcaagctacttaaactaacgaactgtggtaactctttcaggtttctgaagatcagcccagaggggaaggtgcctgtgtttaacggtggtgatggcaaatggattcctgattctgatgtgatcactcaagtcattgaggagaagtacccaaccccgtctcttgtcacccctcctgagtatgcatcagtgtaagtctcctccccacccccaatccccatccacaatttatagttgagttctctagaataaaacatcagacatccttcctatatccttgtcttgaaagctttattcataagcagaggcttcattagtaccttctgcctatatatttgttggttcataattaatattgctagtcaataattcttcacagcatgtcaggtctggtaaatgtcctcctataataagttagcattttcaagaggcatctaaggaaaacttcatgtacttgatctttatttcctcaatgacatcctagcgacaacttgcaaggttgtcatctctttgacaaagtgtattctgcaggattattggcatgatctttgagttcaacaataatacacaccaaccttcattccataaagataaattttaacattgcctcttttcaaaaggaaaaagatttgacgttacttactatttatctgttatggtccttctgtgtttgaggcttcaatttttctgtgacttgtaataacaggggatcaaaaattttctcatgcttcacaacgttcttgaagagcaaggatccaaatgatggttcagagaaggcacttcttactgaactgcaggcactcgaggagcatctgaaagctcatgtaagtgaaagtgtttataggcagttgatttggctgttgctttctgctacaggatacgaataacacgtgcttccttgttcatttcgatgcatccaaatttcactgtctgtacacttgtcctgtctggacatgtcacactgcaatccactcggatgcatccaatttccactgtaatagcacttgatctgtctgcatatgtacatgctgcaattattaggcatcgcctaagtgcattctaggtcatgacctcaatacctcatgggtcttaattcagtttgactatgatactttggttgaaaagcaaactttctttacatcatggtcaaaccttttggcgtttgcagggcccctttatcaacgggcagaacatttcagctgctgaccttagcctggcaccaaagctctaccatctccaggttgctctggagcatttcaaaggctggaagatcccggaagacctaaccaatgttcatgcttacacagaggtacaacactaatgcccaagtggagacagattggtcttattatttctaaaacacattcagaatcaaatcattgggttctgtattgttgttgtgcaggctctgtttagccgcgaatctttcatcaagacgaaggcagctaaggagcacctgattgctggatgggcaccaaaagtgaatgcgtaagagcctgcccttatgctctggtgctgcttggacaccatgctgtttatctgatcggtccatgtcagtggtgggcactactactactcttgtgtagcttgggtgcatgattgggttggaataatgtagcctcatccgttgagtaccttgatatggttgttgcaagtgtgcactttttctatgaactatctcctgctggcttaagtcgaaaccgtgggtcggtttggccttatgttcaactaagagagtgcatatactgtaatggaacctttgctagtacaatatgttatatgaataatggagatgcagcctgcagctgctcttgcttggagcttatgatcagtatattcagcaatgtagtatgtatcactgtatagtgtttttcacctctagttcaagcctgcaaacattagatttgctggtgaagttgttatgcaataatgcaaagtggagcagtataactgacaccatgtttcatc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061005.1 RefSeq:Os05g0116100]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 16:05, 18 October 2016

The rice Os05g0116100 was reported as OsDHAR1 in 2013 [1] by researchers from South Korea.

Annotated Information

Figure 3. Comparison of agronomic traits between TG and WT rice plants under normal field conditions.[1].

Gene Symbol

  • Os05g0116100 <=> OsDHAR1,DHAR1

Function

  • OsDHAR1 overexpression, capable of functioning in AsA recycling, and protein folding increases environmental adaptation to paddy field conditions by the improving AsA pool and redox homeostasis, which enhances rice grain yield and biomass.

Phenotypic analysis

  • At the middle reproductive stage, OsDHAR1-expressing Transgenic (TG) rice plants (OX1, OX-2, and OX-3) displayed a better phenotype than WT rice plants (Fig. 3b).
  • In addition, the total length of the TG rice plants was less than that of the WT rice plants, whereas the number of panicles of the TG rice plants was higher than that of the WT rice plants during vegetative growth (data not shown) and the harvest stages after flowering (Fig. 3c).
  • As shown in Fig. 3d, most of the yield parameters, with the exception of 1,000 GW (TOGW), was increased in OsDHAR1-expressing TG rice plants (OX1 to OX-7) when compared with the WT rice plants.


You can also add sub-section(s) at will.

Labs working on this gene

  • Department of Biology, College of Natural Sciences, Kyungpook National University, Daegu 702-701, South Korea
  • National Institute of Crop Science, Rural Development Administration, Suwon 441-857, South Korea
  • Subtropical Horticulture Research Institute, Jeju National University, Jeju 690-756, South Korea

References

  1. 1.0 1.1 Kim YS, Kim IS, Bae MJ, Choe YH, Kim YH, Park HM, Kang HG, Yoon HS. Homologous expression of cytosolic dehydroascorbate reductase increases grain yield and biomass under paddy field conditions in transgenic rice (Oryza sativa L. japonica). Planta. 2013 Jun;237(6):1613-25. doi: 10.1007/s00425-013-1862-8. Epub 2013 Mar 22. PubMed PMID: 23519921.

Structured Information