Difference between revisions of "Os07g0217600"

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Please input one-sentence summary here.
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The rice '''''Os07g0217600''''' was reported as '''''Oscyp71Z2''''' in 2013 <ref name="ref1" /> by researchers from China and Japan.  
  
 
==Annotated Information==
 
==Annotated Information==
 
===Function===
 
===Function===
Please input function information here.
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[[File:123-Os07g0217600.png|right|thumb|327px|'''Figure 3.''' ''Phenotypes of Oscyp71Z2-RNAi plants treated with PXO99 A at the booting stage.<ref name="ref1" />.'']]
 
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* '''''Oscyp71Z2''''' plays an important role in bacterial blight resistance by regulating the diterpenoid phytoalexin biosynthesis and H2O2 generation.
 +
* Overexpression of '''''Oscyp71Z2''''' inhibited the H2O2 generation
 +
* Overexpression of '''''Oscyp71Z2''''' affects ROS-scavenging ability
 +
* '''''Oscyp71Z2''''' involved the production of main diterpenoid phytoalexins in rice
 
===Expression===
 
===Expression===
Please input expression information here.
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* The researchers obtained nine positive '''''Oscyp71Z2'''''-RNAi lines to suppress '''''Oscyp71Z2''''' transcripts in japonica cultivar Nipponbare. None of these plants showed a significant difference in response to PXO99 A infection compared with the wild-type plants (Fig. 2C; Fig. 3A, B).
 
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* Suppression of '''''Oscyp71Z2''''' did not significantly increase susceptibility to PXO99 A in Oscyp71Z2-RNAi lines. Functional redundancy among the family members may impair the effect of partial '''''Oscyp71Z2 '''''expression levels.  
===Evolution===
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* Furthermore, 356 putative P450 genes have been identified in the rice genome, another P450 gene perhaps functioned as Oscyp71Z2.
Please input evolution information here.
 
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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* College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
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* Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
 +
* Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, Nanjing 210095, China
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* Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
  
 
==References==
 
==References==
Please input cited references here.
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<references>
 +
* <ref name="ref1">
 +
Li W, Shao M, Yang J, Zhong W, Okada K, Yamane H, Qian G, Liu F. Oscyp71Z2
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involves diterpenoid phytoalexin biosynthesis that contributes to bacterial
 +
blight resistance in rice. Plant Sci. 2013 Jun;207:98-107. doi:
 +
10.1016/j.plantsci.2013.02.005. Epub 2013 Mar 7. PubMed PMID: 23602104.
 +
</ref>
 +
</references>
 +
 
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]
GeneName = Os07g0217600|
 
Description = Cytochrome P450 family protein|
 
Version = NM_001065728.1 GI:115471188 GeneID:4342731|
 
Length = 7508 bp|
 
Definition = Oryza sativa Japonica Group Os07g0217600, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
 
AP = Chromosome 7:6526621..6534128|
 
CDS = 6526638..6527567,6533265..6533888|
 
GCID = <gbrowseImage1>
 
name=NC_008400:6526621..6534128
 
source=RiceChromosome07
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008400:6526621..6534128
 
source=RiceChromosome07
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggaggacaaggtgttgctcgctgtgggcgcatcccttgtgttggtcttcctgtccaagctgatatcatcatatgccaagaagccgagactgaacctgccgccggggccatggacgctgccgctgatcggcagcgcccaccacctcgtgtcctggagcgagagcgtgcacagcgtcatcgggaagctggcccgggagcacggccccgtcatgcagctctggttaggcgaggtgcccacggtggtcgcgtcgtcgccggaggcggcgcaggagatcctcagggaccacgacctcatcttcgccgaccgccacttgaccagcaccacggcggctatcaccttcggtggcacggacgtggtgatggcccagtacggcgagcggtggcgccacctccgcaagctgctcacgcaggagctgctgaccgtggcgcgggtgcggtcattccggcgcgtccgcgaagaggaggtggcgcggctcgtgcgcgacctgtcggccgccgcagcgtccggcgccaccgtgaaccttaccgacatggtgaacaggttggtcaacgacaccgtgctccggtgctccgtcgggagccggtgcaagtaccgtgaagagttcctggccgcgctgcacgccatactacaccagacgtcggcgctcagcgtcgccgacctcttcccgtcctccaagctcgcgtcgatggtcgcgacagggccacggaacgttctcgcgaaccgcaacaaagtggagcgcatcatagaggagatcatccaagaacggaagaaccaaatcgaaacggacatgatgagcggcaacgacgacgttggcgataaggcggcggtggagagcaagtcatgctctctcgacgtgttgctcaggctccagaaggaaggcggcacgccaattccaattacaaaccaagttatcaccgttcttttatgggacatgtttggggctggcacggatacgtcgtctacaacactgatttggaccatggcagagctcatgcgctccccaagagtaatggcaaaggtgcaggctgagatgcggcaagccttccaagggaaaaacaccataactgaagatgatcttgcccaactaagctatctaaagatggtattaaaggaatcgtttcgattacattgcccagtgccgctattgtcccctcgcaagtgccgtgagacatgtaagatcatgggctatgatgtacccaaaggtacatctgtatttgtgaatgtgtgggcaatatgcagggatagtatgtattggaagaatgccgaggagttcaagccagagagatttgaagataatgatatagaacttaaagggagtaattttaagtttcttccatttggctctggtcgtagaatatgtcctgggataaatcttgggtgggccaacatggaatttgccttggctaatcttctctaccattttgattggaatctgcccgatggaatgttgcacaaagatcttgatatgcaggagtcgcccggtcttgttgctgctaaatgctctgacctaaatgtgtgtccagttactcacatttcttcgagctgtgcgtaa</cdnaseq>|
 
AA = <aaseq>MEDKVLLAVGASLVLVFLSKLISSYAKKPRLNLPPGPWTLPLIG                    SAHHLVSWSESVHSVIGKLAREHGPVMQLWLGEVPTVVASSPEAAQEILRDHDLIFAD                    RHLTSTTAAITFGGTDVVMAQYGERWRHLRKLLTQELLTVARVRSFRRVREEEVARLV                    RDLSAAAASGATVNLTDMVNRLVNDTVLRCSVGSRCKYREEFLAALHAILHQTSALSV                    ADLFPSSKLASMVATGPRNVLANRNKVERIIEEIIQERKNQIETDMMSGNDDVGDKAA                    VESKSCSLDVLLRLQKEGGTPIPITNQVITVLLWDMFGAGTDTSSTTLIWTMAELMRS                    PRVMAKVQAEMRQAFQGKNTITEDDLAQLSYLKMVLKESFRLHCPVPLLSPRKCRETC                    KIMGYDVPKGTSVFVNVWAICRDSMYWKNAEEFKPERFEDNDIELKGSNFKFLPFGSG                    RRICPGINLGWANMEFALANLLYHFDWNLPDGMLHKDLDMQESPGLVAAKCSDLNVCP                    VTHISSSCA</aaseq>|
 
DNA = <dnaseqindica>18..947#6645..7268#acatcgatcctacgggcatggaggacaaggtgttgctcgctgtgggcgcatcccttgtgttggtcttcctgtccaagctgatatcatcatatgccaagaagccgagactgaacctgccgccggggccatggacgctgccgctgatcggcagcgcccaccacctcgtgtcctggagcgagagcgtgcacagcgtcatcgggaagctggcccgggagcacggccccgtcatgcagctctggttaggcgaggtgcccacggtggtcgcgtcgtcgccggaggcggcgcaggagatcctcagggaccacgacctcatcttcgccgaccgccacttgaccagcaccacggcggctatcaccttcggtggcacggacgtggtgatggcccagtacggcgagcggtggcgccacctccgcaagctgctcacgcaggagctgctgaccgtggcgcgggtgcggtcattccggcgcgtccgcgaagaggaggtggcgcggctcgtgcgcgacctgtcggccgccgcagcgtccggcgccaccgtgaaccttaccgacatggtgaacaggttggtcaacgacaccgtgctccggtgctccgtcgggagccggtgcaagtaccgtgaagagttcctggccgcgctgcacgccatactacaccagacgtcggcgctcagcgtcgccgacctcttcccgtcctccaagctcgcgtcgatggtcgcgacagggccacggaacgttctcgcgaaccgcaacaaagtggagcgcatcatagaggagatcatccaagaacggaagaaccaaatcgaaacggacatgatgagcggcaacgacgacgttggcgataaggcggcggtggagagcaagtcatgctctctcgacgtgttgctcaggctccagaaggaaggcggcacgccaattccaattacaaaccaagttatcaccgttcttttatgggtgagtaagcttcacatcactgttttttaatcatttagcatgtcgtctttggtttaggaacagggtgttatttataggttagactatccattttttttaagggatggaccttttttttttttttttgagatggatggtatgattcgcatatgagtgacaagaaaaaaagtgggttggattagtccgtcaggttttgagggatatggttgatccagatcttagtgacacattcccttttaggaatgaatacagtctaactgttccaagccaaacaccctcaaaaagagttttgaggtttcgacttgtccaatccaccccattcaacaaacccaacacatgcttaagttaagttttaacttaacttaaatgaacccaacacatccttccatttaaaacttgccccatgaaattgtgtttttaacaagatatgggaacaacaacctggtaaattaattgagtaaactttccctttaatatgtgcatactcattcaatctatgtattcatggtagattaggggcaatgttcaatcatgagaaacaacattaataggggaatgaaaattacggtaagtgctacttcctccgtttcacaatgtaagactttctagtattgtccacattcatttagatgttaatgaatctagacaatatatatatatatatatattcattaacatctatatataagtggacaatgcttgaaagtcttacattgtgaaacggagggagtaatatgtatgaaatttgctactctctccgtcccacaatataagagattttgaatttttgattgcaacgtttgaccactcgtcttattcaattttttttgcaaatatagaaaacgaaaagttgtgcttaaagtacggtagataataaagtaagtcacaaataaactaaataataatttcaaaaaattttgaataagacgagtggtcaaacgttacaagcaaaaaacctcaaaataccttatattatgggacggagggagtagaaattatgtttaacatagaacatcaatgttatactatattcagtttaatggttatggtaaattgaaatattttaaaattccaaaaatattttaattttatttcttacacctaattaaaatatgtggttttaaaataaccatttatttctcttgcaagtattatatttgttttgcacattacttggatgcgtcattgaaatgtagaaagagttgttatgggtcattgacacaagtgcagaaaatatgtttctaggtggcttataacatgttttcacgggtgtttcttgacccaccttgtgagggcttgaacaaaggaagtacatttgcaggctcatgaaagaaccacacgtgaaaatggatttagacagacgtatatcttatgttcccatcagcaaaatacatttacaaatgatgatttcttatatatggtggccacctgtggatacaagtttttgcaggcggttcagttcagaaaaaccgccggcacaaaaaaaaaatctagctgccatgtagcacggcgagcccatacaaaccattgggagatctcttgtcagaatatattcacgtcaatcacattacaaattcttaaccacattcacattaactgaacattatagattgtgccaattgtgttgatcatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattatccatatccacatttggatgcaaaatacatactgaaaatgatagttttaagtcatacaaatccaatctatacatctggctcgcatgagatatatatatagcataaattctatctacgctgtcttctctaaacatttgctcaatatgaatcaatgcatatagctaattaagcactttgttttgcatcaacataccgatccactacacttctaaggctggtttcttaggtgagggttgggaaccctcacatttgacacagaaaacggagcaatggatgaatgcgtgattaattaataattagcttaaaaaaacttcaaaaatgaattaatatgattttttaaagcaatctttttaaaaaacttttgcaaaacacacaccgtttagcaatttgaaaagcgtgcgcgtggtaaacgagagagtgaggttgggaacatggacataagaaaagattgtgaaaaggctctgctccgaaaaaaatagatgaagcactaatgcttgttgtcgcaggcaatttttcctatggctgatttctctgtaatttccctatacctcccatgcatccaatatatacaactagagaagcaagagaccgagtagatctattaacaccctaaatgccaccagatgaaatcaccctcggcagtgttcaaataagcaacaaagcaagcaactgtcattatacacaagcaagcttaaatctccgacgatagccgtcgatagcagtgtaaggacaatgtaccaggatgttttgtggttatggtgggacatcccgcaggaggttgtcacttagatgcggatgcatcacctttgccggaggcgtatgggaaaagtaggatgagtggagatcttgcagggaatggcggcgttggcagagcaagtggacaaccggggtggagctcgtggatctagcgggtaaccatggtggtgctggttatttcggatagaatactactcctagacttaaatcactgaaccactctggtcgatttattatgtctaaatgatttttgcatgcagcttcttttgaaatacagctataagttaaaaatcttttcgtatgcgaatgacttagcaaccaaccgtggaaacactttatagaggcagatgcgcaccgctggttgcatgcattggtgggcttgcttgtccataaatatttagaaatatttgcgtaggtggacaacctaattatgcaggctccatgtgcatgtaattctaagataaaaatgaatttcatagagaattcacatggattctgattaaggtaaaaaaacttatctatgtggtacttactacatgtgcttcattttggttaggtatctttatccttaaaatactttcattacaagggtcactctctattgttaccatgcgtaccatgtgaccttagcttgctagatatcatgacatttgtgagaatacatagtattaaatttattagttgaaggagttattgacctaaccaaattgaaggaattatagtaagggtcactctggaattttgttaatcacaatcggccttcgtacaaaatttctataaacttttgaataaaaagtaaaaccagttgagaccacatgtcattgagaagactaatttctatgcgtccacttgtaaactactctagataccatattataagagattagattcagcatatattaatttgggttaaatatttagttttaacatatactccttccatcccaaactataagacgtgcaacaaccactaatgcaaaggccaaaaaagaattactatctcctactcattttcatcacagcaataaatacaataagtacacccgatgggattaaatcttgagggtgaaggattttaaaaacgacggatttagaagagtgggtgtgctagttaattgcttgcatgcatgcctgcacgcacgccatgtattttgaaacattgaaaaaatatatatagttgtacttatattttattaggatggagggaattattacttgcaacaaaagatttaacatatattttaatttgaacgaaagatttactagcatataaaacatggcaatatattaaaaatcaaaactttatccctaaattacatactgcctgggccggtctggtgtcatggccctagcagctggcccatccaggagtacgtgctaggaggcggggccatgggccgtggctttacgtcttcctccgcttgtgccggcggcccctcccagctggtcggtggcctccacctcgtcttgcagctccacagcctctcactctggccccccacctactgtgcctcagttgccctggccggccacactctggcacctcgccttcacaccgtgaccaggacctcgtcctcgggctccacatccatgccgtccataggccatgtacaacgctccactctgacctgtggtctcacggctcccacgtcagagctgagcccacgtcagagccgagccgagctcgtagccgaacgaggttccacaggccggaagcgcgcttgcagagggaacgcttgaagcgccgcacctaggctcgggagccgctaagccacgactcgaagactagcattggaggagtcggagccccacgtatcgcttcgtccggtcggtccccgcgtgcacctgccccaaatccccatctcgctgtggttgtcgtcgccactcaccgccgccattgtggtcgcgtcgctgctcaccagatccgccgccagatccggtgagctcatggtcggagaagcaccgtcgccgacgcttgcgaagaacggagggggagaggaactgccgtcgtcgttgtggtctcgtcgccgctcgccggcaaatccgctgctgttgtggcttgtgtcgccagatccagcgagcacgaggctgtatccgcgctgcccaactctctctcgttgtcggagagctcgagctcgagcgccgccgatcccgtcgccctctgctcacctagagagaaggaaaggggagatggggatctcgcggcggcgtgagggacaaggagggaataggtctcaccggcgagctcacggggtaggggaggggtctggtcggcaaggtggactaggagaagaaggagagcgccggtttctttggagaagaagaatacgagaatgctcagcagagagagggagagagaataaaatagatggtttctatggagaagacgagaaggctcgggagagagaataaaaaagagagggggagaggctgacagtgggtccatatggtgtttaggggtgcatatatacttcttttaattgttataaggaccaaaatataaagttttaataggttttataataagatacactatcagagctgacatataaatagatagtggctgaatgcaaaatacgttttggagtggtttccgctgtgagtagtgtgacctttgtgtggttctatcctatgtggcgtcttgagatcactggtgcctgcagtggtctccattgtgcatgcccttaggcccatcttcctccacactcacctcgccctcccttgtcctcatcatcatcgtcgtttcattgctgtcgtttatgtattaagagtaaaaaaaatcaatgaaacaaagaaatagttcaatgctcaagattgattttttagctcttacttacctgaggtaagatggagcattgtgagctcgtagtatgaagatagacagagaacctacgcctacaaaacatagttagcttttttaaaagaaaataagcaagatgattacatcctaacctctctatttagaataaacccaaccataaagttttatttacataaatagcctcgaataagggtcaagacctcctatgagattaaataagaaagcatacatataacaatattgtatacaaaaagatagtaatgttttactgaaaaaatggcatcatgctttgtacagcaggtttaggctgtatgttcaggcgcgtattgtgcaagtttaggtggtaatggataaaaaagatttctggtgattagtaaattattaattacaaaaaccatcattccaggacatgtttggggctggcacggatacgtcgtctacaacactgatttggaccatggcagagctcatgcgctccccaagagtaatggcaaaggtgcaggctgagatgcggcaagccttccaagggaaaaacaccataactgaagatgatcttgcccaactaagctatctaaagatggtattaaaggaatcgtttcgattacattgcccagtgccgctattgtcccctcgcaagtgccgtgagacatgtaagatcatgggctatgatgtacccaaaggtacatctgtatttgtgaatgtgtgggcaatatgcagggatagtatgtattggaagaatgccgaggagttcaagccagagagatttgaagataatgatatagaacttaaagggagtaattttaagtttcttccatttggctctggtcgtagaatatgtcctgggataaatcttgggtgggccaacatggaatttgccttggctaatcttctctaccattttgattggaatctgcccgatggaatgttgcacaaagatcttgatatgcaggagtcgcccggtcttgttgctgctaaatgctctgacctaaatgtgtgtccagttactcacatttcttcgagctgtgcgtaaatgccagtgtaacacaatgcatcttcaaaaagatcagaacagcgcccatagtatatgtatgtactgccagatatatatatggggttggtatatatgtgtgctgttagatatggggtcttcgcgatttcaagataacttatgtacctgagcagaaaaaacatattgagcctacttatgtacgtacttatgctcttaataattgtactgccaatgaaataattaagtgtgtatcttgtacat</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001065728.1 RefSeq:Os07g0217600]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 7]]
 
[[Category:Chromosome 7]]
 

Latest revision as of 09:02, 19 October 2016

The rice Os07g0217600 was reported as Oscyp71Z2 in 2013 [1] by researchers from China and Japan.

Annotated Information

Function

Figure 3. Phenotypes of Oscyp71Z2-RNAi plants treated with PXO99 A at the booting stage.[1].
  • Oscyp71Z2 plays an important role in bacterial blight resistance by regulating the diterpenoid phytoalexin biosynthesis and H2O2 generation.
  • Overexpression of Oscyp71Z2 inhibited the H2O2 generation
  • Overexpression of Oscyp71Z2 affects ROS-scavenging ability
  • Oscyp71Z2 involved the production of main diterpenoid phytoalexins in rice

Expression

  • The researchers obtained nine positive Oscyp71Z2-RNAi lines to suppress Oscyp71Z2 transcripts in japonica cultivar Nipponbare. None of these plants showed a significant difference in response to PXO99 A infection compared with the wild-type plants (Fig. 2C; Fig. 3A, B).
  • Suppression of Oscyp71Z2 did not significantly increase susceptibility to PXO99 A in Oscyp71Z2-RNAi lines. Functional redundancy among the family members may impair the effect of partial Oscyp71Z2 expression levels.
  • Furthermore, 356 putative P450 genes have been identified in the rice genome, another P450 gene perhaps functioned as Oscyp71Z2.

You can also add sub-section(s) at will.

Labs working on this gene

  • College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
  • Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
  • Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, Nanjing 210095, China
  • Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan

References

  1. 1.0 1.1 Li W, Shao M, Yang J, Zhong W, Okada K, Yamane H, Qian G, Liu F. Oscyp71Z2 involves diterpenoid phytoalexin biosynthesis that contributes to bacterial blight resistance in rice. Plant Sci. 2013 Jun;207:98-107. doi: 10.1016/j.plantsci.2013.02.005. Epub 2013 Mar 7. PubMed PMID: 23602104.


Structured Information