Difference between revisions of "Os04g0656500"
Liming Pan (talk | contribs) (→Phenotypic analysis) |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | + | The rice '''''Os04g0656500''''' was reported as '''''OsLG1''''' in 2013 <ref name="ref1" /> by researchers from Japan and UK. | |
==Annotated Information== | ==Annotated Information== | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os04g0656500''''' '''''<=>''''' '''''OsLG1,OsSPL8,SPR3''''' | ||
===Function=== | ===Function=== | ||
| − | + | * The '''''OsLG1''''' gene encodes a SBP (SQUAMOSA promoter–binding protein) domain and controls laminar joint and ligule development. | |
| − | === | + | ===Phenotypic analysis=== |
| − | + | * Morphological differences in panicles between cultivated O. sativa and wild O. rufipogon are explained by a single locus (SPR3): O. rufipogon has the dominant allele Spr3 for spreading panicles 11. | |
| + | * To investigate gene effects, the researchers selected a cultivar of O. sativa Nipponbare (with closed panicles) and a wild accession of O. rufipogon W630 (with spreading panicles) (Fig. 1a–g). | ||
| + | * Their panicle shapes are formed by the basal structure of primary branches (Fig. 1c,f). At the cellular level, O. rufipogon W630 has tissue resembling a bump structure between the main and primary branches (Fig. 1d,g). | ||
| − | = | + | |
| − | + | [[File:136-Os04g0656500.png|center|thumb|727px|'''Figure 1.''' '' Plant morphology of O.sativa Nipponbare, O.rufipogon W630 and NIL(SPR3-Npb).<ref name="ref1" />.'']] | |
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * Graduate School of Agricultural Science, Kobe University, Kobe, Japan | |
| + | * Bioscience and Biotechnology Center, Nagoya University, Nagoya, Japan | ||
| + | * Faculty of Biotechnology, Fukui Prefectural University, Yoshida, Japan | ||
| + | * Iwate Biotechnology Institute, Kitakami, Japan | ||
| + | * The Sainsbury Laboratory, Norwich Research Park Norwich, UK. | ||
| + | * National Institute of Agrobiological Sciences, Tsukuba, Japan. | ||
==References== | ==References== | ||
| − | + | <references> | |
| + | * <ref name="ref1"> | ||
| + | Ishii T, Numaguchi K, Miura K, Yoshida K, Thanh PT, Htun TM, Yamasaki M, | ||
| + | Komeda N, Matsumoto T, Terauchi R, Ishikawa R, Ashikari M. OsLG1 regulates a | ||
| + | closed panicle trait in domesticated rice. Nat Genet. 2013 Apr;45(4):462-5, | ||
| + | 465e1-2. doi: 10.1038/ng.2567. Epub 2013 Feb 24. PubMed PMID: 23435087. | ||
| + | </ref> | ||
| + | </references> | ||
==Structured Information== | ==Structured Information== | ||
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] | ||
Latest revision as of 07:14, 20 October 2016
The rice Os04g0656500 was reported as OsLG1 in 2013 [1] by researchers from Japan and UK.
Contents
Annotated Information
Gene Symbol
- Os04g0656500 <=> OsLG1,OsSPL8,SPR3
Function
- The OsLG1 gene encodes a SBP (SQUAMOSA promoter–binding protein) domain and controls laminar joint and ligule development.
Phenotypic analysis
- Morphological differences in panicles between cultivated O. sativa and wild O. rufipogon are explained by a single locus (SPR3): O. rufipogon has the dominant allele Spr3 for spreading panicles 11.
- To investigate gene effects, the researchers selected a cultivar of O. sativa Nipponbare (with closed panicles) and a wild accession of O. rufipogon W630 (with spreading panicles) (Fig. 1a–g).
- Their panicle shapes are formed by the basal structure of primary branches (Fig. 1c,f). At the cellular level, O. rufipogon W630 has tissue resembling a bump structure between the main and primary branches (Fig. 1d,g).
Figure 1. Plant morphology of O.sativa Nipponbare, O.rufipogon W630 and NIL(SPR3-Npb).[1].
You can also add sub-section(s) at will.
Labs working on this gene
- Graduate School of Agricultural Science, Kobe University, Kobe, Japan
- Bioscience and Biotechnology Center, Nagoya University, Nagoya, Japan
- Faculty of Biotechnology, Fukui Prefectural University, Yoshida, Japan
- Iwate Biotechnology Institute, Kitakami, Japan
- The Sainsbury Laboratory, Norwich Research Park Norwich, UK.
- National Institute of Agrobiological Sciences, Tsukuba, Japan.
References
- ↑ 1.0 1.1 Ishii T, Numaguchi K, Miura K, Yoshida K, Thanh PT, Htun TM, Yamasaki M, Komeda N, Matsumoto T, Terauchi R, Ishikawa R, Ashikari M. OsLG1 regulates a closed panicle trait in domesticated rice. Nat Genet. 2013 Apr;45(4):462-5, 465e1-2. doi: 10.1038/ng.2567. Epub 2013 Feb 24. PubMed PMID: 23435087.
