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| − | Please input one-sentence summary here.
| + | The rice '''''Os03g0700400''''' was reported as '''''LOX3''''' in 2013 <ref name="ref1" /> by researchers from China. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | [[File:139-Os03g0700400.png|right|thumb|327px|'''Figure 1.''' ''Subcellular localization of Os03g0700400 in rice protoplasts.<ref name="ref1" />.'']] |
| | + | ===Gene Symbol=== |
| | + | *'''''Os03g0700400''''' '''''<=>''''' '''''Lox3*, lox3(t), OsLOX3,LOX3''''' |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * The rice '''''sLOX3''''' encodes Rice Seed Lipoxygenase 3 protein. |
| | + | * '''''sLOX3''''' might negatively affect seed longevity by facilitating colonization of particular seed pathogens. |
| | | | |
| − | ===Expression=== | + | ===Expression === |
| − | Please input expression information here.
| + | * The '''''sLOX3''''' gene was highly expressed in roots, moderately in embryos and very weakly in leaves, leaf sheaths and stems. |
| | | | |
| − | ===Evolution=== | + | ===Subcellular localization=== |
| − | Please input evolution information here.
| + | * Subcellular localization analysis showed that '''''sLOX3''''' protein was localized into the cytosol. |
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * State Key Laboratory for Crop Genetics & Germplasm Enhancement, Jiangsu Provincial Center of Plant Gene Engineering, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China |
| | + | * Institute of Crop Science, The National Key Facility for Crop Gene Resources and Genetic Improvement, Chinese Academy |
| | + | of Agricultural Sciences, Beijing 10081, China |
| | + | ==References== |
| | + | <references> |
| | + | * <ref name="ref1"> |
| | + | Long, Qizhang, et al. "Molecular genetic characterization of rice seed lipoxygenase 3 and assessment of its effects on seed longevity." Journal of Plant Biology 56.4 (2013): 232-242. |
| | + | </ref> |
| | + | </references> |
| | | | |
| − | ==References==
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| − | Please input cited references here.
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| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0700400|
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| − | Description = Similar to Lipoxygenase 1 (EC 1.13.11.12)|
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| − | Version = NM_001057528.1 GI:115454784 GeneID:4333821|
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| − | Length = 4402 bp|
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| − | Definition = Oryza sativa Japonica Group Os03g0700400, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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| − | AP = Chromosome 3:28850496..28854897|
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| − | CDS = 28850496..28850685,28851084..28851382,28852069..28852306,28852564..28852899,28852988..28853073<br>,28853169..28853276,28853384..28853691,28853770..28854033,28854126..28854897<br>|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008396:28850496..28854897
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| − | source=RiceChromosome03
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008396:28850496..28854897
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| − | source=RiceChromosome03
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgctgggagggatcatcgacaccatcacggggtcgtcgaagcagtcgcggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctaccccgccgacaagtaccgttacgaccgcgtcttcttcgccaacgatgcctacctgccgagccagatgccggcggcgctgaagccgtaccgcgacgacgagctccgcaacctgcgcggcgacgaccagcagggcccctacgaggagcacgaccgcgtctaccgctacgatgtctacaacgacctcggctcccccgactccggcaaccctcgccccatcctcggcggctcccccgacaccccctaccctcgccgcggccgcaccggccgcaaacccaccaccaccgatccggactcggagagtaggctgtcgctggtggagcagatctacgtgccgcgggacgagcggttcgggcacctgaagatggcggacttcctgggctactcgatcaaggcgatcgcggaggggatcgtgccggcgatccgcacgtacgtggacaccacccccggcgagttcgactcgttccaggacatcctcgacctgtacgagggtggcctcaagctccccgatgtccccgcgctggaggagctccgcaagcgattcccgctccagctcgtcaaggacctcctccctgccgccggcgactatatcctcaagctccccatgcctcagattatcaaacaggacaaggaggcgtggaggacagacgaggagttcgcgcgggaggtgctcgccggcgtgaacccgatgatgatcacgcgtctcacggaattccctccgaaaagtagtctcgatcctagcaagttcggcgaccacaccagcatgatcacggcggcgcacatcgggagcaacctcgagggcctcaccgtgcagcaggcgctggacagcaaccggctgtacattctggaccaccacgaccggttcatgccgttcctgatcgacgtcaacggcctggagggcaacttcatctacgcgaccaggacgctcttcttcctgcgaggggacggcacgctggcgccgctcgccatcgagctgagcgagcctatgatccagggcgacgtcaccgccgccaagagcaccgtgtacacgccggcgtccaccggcgtcgaggcctgggtgtggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagccactggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcgtgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacgccctggcgcggcagacgctcatcaacgccggcggcatcttcgagatgaccgtcttccccggcaagtacgcgctctggatgtcgtccatggtgtacaagaactggaacttcaccgagcagggcctccccgccgatctcatcaaaaggggagtggcggtggaggacgcgacgagcccgtacaaggtgcggctgctgatcaaggactacccgtacgcggcggacgggctggagatctggcacgcgatcgagcagtgggtgggcgagtacctggcgatctactacaccgacgacggcgtgctccgaggcgacgcggagctgcaggcgtggtgggcggaggtgcgggaggtcgggcacggcgacctcaagggcgcggcgtggtggcccaggatggacgccgtgtcggagctccgcgacgcgtgcaccaccatcatctggatcgcgtcggcgctgcacgcggcggtcaacttcggccagtacccgtacgccggttacctcccgaaccggccgacggtgagccggcggcggatgccggagcccgggacggaggcgtacggcgagctggggcgcgacccggagcgggccttcatccgcaccatcaccagccagctccagaccatcatcggcatctcgctgatcgaggtcctgtccaagcactcctccgacgaggtgtacctcgggcagcgcgacacgccggcgtggacgtcggacgccagggcgctggaggcgttccggcggttcagcgaccggctggtggagatcgaagggaaggtggtgggcatgaacggcgacgcggggctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctccgacgtcaccggcgccgccgccggcatcaccgccaagggcatccccaacagcatctcgatctga</cdnaseq>|
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| − | AA = <aaseq>MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLG EFLGKGVTCQLISSTAVDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWD VDKLGVPGAIIVKNHHSNEFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFF ANDAYLPSQMPAALKPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYNDLGSPDSGNPR PILGGSPDTPYPRRGRTGRKPTTTDPDSESRLSLVEQIYVPRDERFGHLKMADFLGYS IKAIAEGIVPAIRTYVDTTPGEFDSFQDILDLYEGGLKLPDVPALEELRKRFPLQLVK DLLPAAGDYILKLPMPQIIKQDKEAWRTDEEFAREVLAGVNPMMITRLTEFPPKSSLD PSKFGDHTSMITAAHIGSNLEGLTVQQALDSNRLYILDHHDRFMPFLIDVNGLEGNFI YATRTLFFLRGDGTLAPLAIELSEPMIQGDVTAAKSTVYTPASTGVEAWVWQLAKAYV AVNDSGWHQLISHWLNTHAVMEPFVIATNRQLSVTHPVHKLLSPHYRDTMTINALARQ TLINAGGIFEMTVFPGKYALWMSSMVYKNWNFTEQGLPADLIKRGVAVEDATSPYKVR LLIKDYPYAADGLEIWHAIEQWVGEYLAIYYTDDGVLRGDAELQAWWAEVREVGHGDL KGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRRMPEP GTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDTPAWTSDA RALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGIT AKGIPNSISI</aaseq>|
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| − | DNA = <dnaseqindica>1..190#589..887#1574..1811#2069..2404#2493..2578#2674..2781#2889..3196#3275..3538#3631..4402#atgctgggagggatcatcgacaccatcacggggtcgtcgaagcagtcgcggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacccaagtgagcacaccccccccccccctctcacccccttgcatctcttctcttggtcgatttacctctcttgttcatttttgtccatacaaacttaaacactgtatgggcggccattgcctagctagctcggtcctcttttgatgggacatggaaagaagagaccaacgtcgaggaaaaagacaaccagggcaggagtaccagatgctaacccaaagtacaaaagctaaaaagtaaaaaaaaaaagaagaagtagtacctcactttgaactagatgcctgaaactatagctggtgtcgcgaggtggtgacacgtagtataattaacagctggggcatgattagtcgttggtttggactaattaacgggaacggattgggcatgatcctctcatcggcgtgcagacaacggcaaccgggggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctaccccgccgacaagtaccgttacgaccgcgtcttcttcgccaacgatgtgagttcttctctgctgcatactgtattatgctaccctgcatgtaaattacactattacagtaaccatttgccgttcttctttgtttggccagttcgtagatgctttatgtagtaagttgcttgattcacgtcgtttggtaggcgtccatagggaagatatttggttaggtgagaagtgaatggactttatgtaagttgtttatgtggtaggtgaagtggatttagtagcactgttcaaaaaaaagaagcagctctacaatggatatgcttcctgatgataacaacataaaagtggctatagtactagaaatctggaatagtccttggactcaggaaggcatgtgagttcacgtgagtcatcaactcatcatagttgccacagttcacagttcacacccatttagacggcattgtttcatggccccgagaagctttttcaacaagatcaacgacacagcactcgattttactttgcgaacacatgacacggtaaaagttttaaagtgaacagatagttgcctgcctcttgttcagcgtgcagccaggtgtccaaggccggtgccgtatcaagggactgatttgggcaatcaactaaccaattaagtaggagtaattagcgatgcgtattaatacgagtacgtgctataattaactttgtgatatattttctgcggcgacgcgcaggcctacctgccgagccagatgccggcggcgctgaagccgtaccgcgacgacgagctccgcaacctgcgcggcgacgaccagcagggcccctacgaggagcacgaccgcgtctaccgctacgatgtctacaacgacctcggctcccccgactccggcaaccctcgccccatcctcggcggctcccccgacaccccctaccctcgccgcggccgcaccggccgcaaacccaccaccaccggtacgcatcccccaaccaaaaattttacgattcttaaaaaaacattttaaggtctaaaaagttttttatacatttttacactagaatgtggcaccttcactcacatacctcccagttaggcccacctgtcatagtgaaacaccagaactggtccatgttcagctgcaatgtctcactgacggtgggcccggtttgtgtggttgaccgttgactttgactttgactgatgttttttgtacacgtatgcgtgcgtgcagatccggactcggagagtaggctgtcgctggtggagcagatctacgtgccgcgggacgagcggttcgggcacctgaagatggcggacttcctgggctactcgatcaaggcgatcgcggaggggatcgtgccggcgatccgcacgtacgtggacaccacccccggcgagttcgactcgttccaggacatcctcgacctgtacgagggtggcctcaagctccccgatgtccccgcgctggaggagctccgcaagcgattcccgctccagctcgtcaaggacctcctccctgccgccggcgactatatcctcaagctccccatgcctcagattatcaaacgtgagcgcaacctgtcatcgtagagacttttcatcagaatctttaggtgaaaactgacgatcgatgtaatgtttggctatgtatgcagaggacaaggaggcgtggaggacagacgaggagttcgcgcgggaggtgctcgccggcgtgaacccgatgatgatcacgcgtctcacggtgagtgatcagtgatgcgttcatgccaaattgatagtgaacacggctgctgcaacgtgaaatgtggcaaatttaactcgatgttgatcccgcaggaattccctccgaaaagtagtctcgatcctagcaagttcggcgaccacaccagcatgatcacggcggcgcacatcgggagcaacctcgagggcctcaccgtgcagcaggttggtttcgtacgtgcagattttgctatcaatcgtgacttgcaaacctgaattgttgctggcaaatggcaatagtgtgtggaaatttactgtgtcgcgatttgcaggcgctggacagcaaccggctgtacattctggaccaccacgaccggttcatgccgttcctgatcgacgtcaacggcctggagggcaacttcatctacgcgaccaggacgctcttcttcctgcgaggggacggcacgctggcgccgctcgccatcgagctgagcgagcctatgatccagggcgacgtcaccgccgccaagagcaccgtgtacacgccggcgtccaccggcgtcgaggcctgggtgtggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagccactggtacgttcaaaaccagagcaatcgatcgcttcatcgacggagatttgtactcatcggttgttgttgttggttgatcaggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcgtgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacgccctggcgcggcagacgctcatcaacgccggcggcatcttcgagatgaccgtcttccccggcaagtacgcgctctggatgtcgtccatggtgtacaagaactggaacttcaccgagcagggcctccccgccgatctcatcaaaaggtagtagtattacacatctccattgatttttgtaaggcatcagtgggaagaatgtacaatttagtgcaaaatcgtgtgaattttttttgcaggggagtggcggtggaggacgcgacgagcccgtacaaggtgcggctgctgatcaaggactacccgtacgcggcggacgggctggagatctggcacgcgatcgagcagtgggtgggcgagtacctggcgatctactacaccgacgacggcgtgctccgaggcgacgcggagctgcaggcgtggtgggcggaggtgcgggaggtcgggcacggcgacctcaagggcgcggcgtggtggcccaggatggacgccgtgtcggagctccgcgacgcgtgcaccaccatcatctggatcgcgtcggcgctgcacgcggcggtcaacttcggccagtacccgtacgccggttacctcccgaaccggccgacggtgagccggcggcggatgccggagcccgggacggaggcgtacggcgagctggggcgcgacccggagcgggccttcatccgcaccatcaccagccagctccagaccatcatcggcatctcgctgatcgaggtcctgtccaagcactcctccgacgaggtgtacctcgggcagcgcgacacgccggcgtggacgtcggacgccagggcgctggaggcgttccggcggttcagcgaccggctggtggagatcgaagggaaggtggtgggcatgaacggcgacgcggggctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctccgacgtcaccggcgccgccgccggcatcaccgccaagggcatccccaacagcatctcgatctga</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057528.1 RefSeq:Os03g0700400]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
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| − | [[Category:Chromosome 3]]
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