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| − | Please input one-sentence summary here.
| + | The rice '''''Os01g0254000''''' was reported as '''''OsSar1c''''' in 2013 <ref name="ref1" /> by researchers from China and Japan. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | [[File:140-Os01g0338000.png|right|thumb|327px|'''Figure 2.''' ''Subcellular localization of Sar1 in rice protoplasts.<ref name="ref1" />.'']] |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * '''''Sar1''''', a small GTPase, acts as a molecular switch to regulate the assembly of coat protein complex II, which exports secretory protein from the ER to the Golgi apparatus. |
| | + | * There are four putative Sar1 genes ('''''OsSar1a, OsSar1b, OsSar1c, OsSar1d''''') in rice. |
| | + | * '''''OsSar1a/b/c''''' play a crucial role in storage proteins exiting from the ER, with functional redundancy in rice endosperm, and glutelin and α-globulin transported together from the ER to the Golgi apparatus by a pathway mediated by coat protein complex II. |
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| − | ===Expression=== | + | ===Subcellular localization=== |
| − | Please input expression information here.
| + | * '''''OsSar1''''' was fused with mCherry (OsSar1–mCherry) and co-expressed with yellow fluorescent protein (YFP)–AtSec24, which labels ERES 2009), in rice protoplast cells. The punctate structures labelled with OsSar1–mCherry coincided with YFP–AtSec24 fluorescence (Fig. 2B), and the distribution pattern of the four Sar1 proteins was similar. |
| | + | * These data indicated that the '''''OsSar1''''' isoforms were distributed at ERES, at the ER, and in the cytosol. |
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| − | ===Evolution=== | + | You can also add sub-section(s) at will. |
| − | Please input evolution information here.
| + | |
| | + | ==Labs working on this gene== |
| | + | * Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China |
| | + | * Faculty of Agriculture, Kyushu University, Fukuoka 812–8581, Japan |
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Tian L, Dai LL, Yin ZJ, Fukuda M, Kumamaru T, Dong XB, Xu XP, Qu le Q. Small |
| | + | GTPase Sar1 is crucial for proglutelin and α-globulin export from the endoplasmic |
| | + | reticulum in rice endosperm. J Exp Bot. 2013 Jul;64(10):2831-45. doi: |
| | + | 10.1093/jxb/ert128. Epub 2013 May 16. PubMed PMID: 23682119; PubMed Central |
| | + | PMCID: PMC3697955. |
| | + | </ref> |
| | + | </references> |
| | + | |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0254000|
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| − | Description = Similar to NTGB2 (Fragment)|
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| − | Version = NM_001049150.1 GI:115435713 GeneID:4327708|
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| − | Length = 5016 bp|
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| − | Definition = Oryza sativa Japonica Group Os01g0254000, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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| − | AP = Chromosome 1:8412824..8417839|
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| − | CDS = 8413249..8413569,8417452..8417583,8417664..8417792|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:8412824..8417839
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:8412824..8417839
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgttcctggttgactggttctacggggtgctggcctcgctggggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaagaccaccctcctccacatgctcaaggacgagcggctcgtgcagcaccagccgacgcagtacccgacgtcggaggagctgagcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtcgatgctgttgtttacttggtggatgccgctgacaaggaacggtttgcggagtcgaagaaggaactcgatgccctccttgcagacgattccctagcaaccgtgcctttcctgatactgggaaacaagatcgacatcccatacgccgcgtcggaggaggaactccgctactaccttggtctgagcaacttcaccaccggtaagggcaacgtgaacctagccgactccaacgtgcggcctctggagatcttcatgtgcagcgtcgtccgcaagatgggctacggcgaaggcttcaaatggatgtcccagtacatcaaatga</cdnaseq>|
| |
| − | AA = <aaseq>MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDER LVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAADKER FAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGLSNFTTGKGNVNL ADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYIK</aaseq>|
| |
| − | DNA = <dnaseqindica>4271..4591#257..388#48..176#gaggcggcggcggcgaccgatctgtgcggggagggggatcgccggagatgttcctggttgactggttctacggggtgctggcctcgctggggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaagaccaccctcctccacatgctcaaggacgaggtaggtcgcccggatcgatcgatcgatcgagatttgtactgatttggttggttctgatttgtgttgggatttgggtgcagcggctcgtgcagcaccagccgacgcagtacccgacgtcggaggagctgagcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtttaccttcagttctaattctactgctcctatatctttgttacttgctgttagatttgttccttgtgcgatggatgggaagcagcgcttgtttgattggaacgaactagggttttaggcatgagggtatcggggattagacatgatgcatatgagtagatgaagaatcggtcgtcttgctcacttcatgggcagggatttggtggtttaattcagtaccgattgctctttttggatcttgcagaggaaaaaaaatcccctgattgagcaattggatgtgttgctggtgcttgtactcaatttagccatgagctccagcattcagattagttataataaggaaaaattggttctatgccatcgaaagttttcaatgggttgtcttgtgaacatacaagctggacaaaaggttgcacatagtacttttttcggtaaacttggcctgtttgtttcagcttagtcttattaccttctgcgtataagctggccttttgatttttgcagtttatgaagacctgcaaatttgagggtagtgtaataactctagtccataaaaaccaaaatgatgctaaaaaaatctagctttttgcttattagtgcttgtgttatgacttaaaaaaaggatgatgaactgttcgtttgctacacaaaatatgtattagcatcagttttttttttaattattgttctcttgttctttttcaaaacaaaaaaggcatgttcactataaaaaaaaagtgaattgctcatgttccgctgtgtttggagagcttttccaaatgtatgattgatgcttcctagttgaccaacataccaccaaagactatgaagcctggttaccactgctaataacgctggtacacaggctgaactgcagttttcggtggtatgttggcaatgtaggaagtctgagtgatatatctgcaaggttgtccagacatactggtcgatagtcaatttccactaaaaaagtcagagccttgccaaacaaagcatataagggtttaacaaacagaacaaatttacaccgactatgggttgtttattatccaattttaattgttcttgtgttcttcttttcccgaagaaagcactgacaacaaaagtttgaaattgtccatgtaccactatatttagagaactttccaaatgtatgcctcatacttcctcattgaccaatataccacaaaacactacaatgttggcctctttaccactatcaagacacttctcccagtccattttgtctgttgagcatcaggacattaataagtgtggagtgccttgctctacatcatcctctgtaaacagtctggggttgcagttttatgtggtatgttggcaatgtaggaagtctgaatcgtatatttgcaaggttgtccaaacatacttgtctgtaggcaatttctcagctaaaaaaattgaagtcttgaaattatctataattttgtcctctatatgtgcttaaaacttgctgagttcacatgccagttttttatgaaagctccctcgtgccaacaacaaggcaaatgaattagtttgcgtatattgctgcgatcaagggtactgtacattatgttgacctttacttaatctgcacaaattgtcatattttgtttcctttctgggagtatttcatggcttagctactattatagatggtaagtatgtttaaccaattttgaccaaccatatctgtcatatcaatcttgaactttagtgcttgaatagtttggagcatgatttccatcttcctctaagagtcctctttgaaaagataatgcgtcactttctcaggtttcaaacttcttcctctctagtccacaaaatgcctttcaaatttctgcagaaacacgttagaccaagcagttcacaagtttcaacaaatagaacaacttcataccgatcttgattattctcatgttcttttttccaaagaaagcatgtgaaccataataatttgggggattgtcggcatacctggagaactttccgaatatattactcatgcttcgcagttgatcaacataccaccaaaggacgggtgttggcctgtttaccgctgttgaggcaatttttcctcgtattttctggcaagaatcaggacatcgatgagtgccttattctacatgaatctcgggcaaacaggctttggctatagtttcagtggtatgttggaaatttaggaagtctgagtggtatatctgcaaggttgtccagacatgctggtctcttgcaatttccgctaaaaatgtagaaatgtaggagcctggccagatgaagcctaagggtggactggcttaaagaaaagaacataagtttcaacaacagtacaaatttgcaccggctatggattgttagcatcagtgatcagtctttgactatgttagcgttcttctccaaaaggaagtattcacaatgaaaatttggaattgtccatgtaccactatgtttggagaacttcccaaatgtatgactcatgcttccatgttgaccaacataccaccaaaatattatgatgttcgcatgttgccctgtttaccactattaatcaagacactccccctcctctcttttgttttcctggtgaacatcaatatattggtaaacaggctaaggttgtaattttctgtggtatgttggcaatgtaggaagtctgaatggtatatctgcaaggttgtccagatgtactgggctgtaggcaattctggcttgccagctgaaaatgtagaaggcttgatctaatatatgattttgtcctttgtactgtccttgcttgaaacttctaattcacatgccgattttctttacatgcaaactcaccctttcttaaaacttctaattcacatgctgattttctttacatgcaaactcatctttcttaaaactggactaattcacattctggttttacatgggcaatttgccttttttttttattccctgctgggaatttttccagcttagctattatcatgtattgcaagcatgtttaacaagtttgagaaaccatatctatatgtaacattgtcatatcaatcatgaacttgatgtgttgtatgatcacaatttatagtgtataattatcaaggtatatacgtgacgaacacttcatggactcttttggcactgagatctgtgcaaattgattcttaaagtcaagtctgattaactactggggccactagtatgtgttatgatacctttagggtgcagggaaattatgcacgtgtcacgatattgatggcaacagtatcttccagagttcagttcttgctttaagtcctgtttgggtctcctggcgcagtttacaaatgaggaaactgtggttatggggtgccaacattttaactgtggtgttacgagatgctcttaatatgatttctataccattggcatcttgctgtcagagaaacaaagatatggggaaaatcgaatgttggcagtgcagtcatggactagtgagaatgggctggggaaccttcattttaagcctttatgtcccccatgaataatttactggaacacattttgtctacaattgctccaaatgtttggaatgcatcttttcaagccaatgtctgtatgactgacgtggtttcaaccattctgccctgcaataggccagaaggaagttgcaccatcaagctgaccaccaattctgtggggaaaaggaaatcctaattcgatgactacatgttctcaatcgcgagatgcaaaatgcttcttgttttgcgaaattcacatttggcctgtagtggagtagactcgattcttcatattttgtaactcgaggagtcattacttgttagactatccacctggaatttggtgacttaactttctgtattggctgtttttaattcctgttttgtttggtaggtcgatgctgttgtttacttggtggatgccgctgacaaggaacggtttgcggagtcgaagaaggaactcgatgccctccttgcagacgattccctagcaaccgtgcctttcctgatactgggaaacaagatcgacatcccatacgccgcgtcggaggaggaactccgctactaccttggtctgagcaacttcaccaccggtaagggcaacgtgaacctagccgactccaacgtgcggcctctggagatcttcatgtgcagcgtcgtccgcaagatgggctacggcgaaggcttcaaatggatgtcccagtacatcaaatgagaggggcttctgctcctcaattgtcaatagcagctgctgctcctgctgtccacagtgggagtgggtaattcaggcctctggttctgtttatcaactctcctgatgctttggagaaacctactgcacctgtaaggaaaaaagtttgtcgtagtggtggatagtgaatgcctgtaagttggtgttaatactagaaatatgacggggtttatttgtttgattgtttatgggtggtgtgaccttattagctagaaaatgtgggttgctggaatcgtttcttgacaacaggaaatgtttcagccaatgtattcacgctatctatctagccagtgatatgtgtatgagcaacttcggtctcttggctgctaacgtctcccctgtgatacttgatcaaaactctttttttttttaagataatggattaaaac</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049150.1 RefSeq:Os01g0254000]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
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| − | [[Category:Chromosome 1]]
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