Difference between revisions of "Os03g0290300"

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(Created page with "{{JaponicaGene| GeneName = Os03g0290300| Description = Similar to W-3 fatty acid desaturase (Fragment)| Version = NM_001056330.1 GI:115452388 GeneID:4332500| Length = 2346...")
 
(Annotated Information)
 
(12 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''Os03g0290300''' was reported as '''OsFAD7''' in 2007 <ref name="ref1" /> by researchers from the Japan.
GeneName = Os03g0290300|
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<br>
Description = Similar to W-3 fatty acid desaturase (Fragment)|
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==Annotated Information==
Version = NM_001056330.1 GI:115452388 GeneID:4332500|
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===Gene Symbol===
Length = 2346 bp|
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*'''Os03g0290300<=>OsFAD7'''
Definition = Oryza sativa Japonica Group Os03g0290300, complete gene.|
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<br>
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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===Function===
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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*The researchers generated 18:3-deficient transgenic rice plants (F78Ri) with co-suppression of two u-3 fatty acid desaturases, OsFAD7 and OsFAD8.that synthesize 18:3. The F78Ri plants showed enhanced resistance to the phytopathogenic fungus Magnaporthe grisea.
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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<br>
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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*In F78Ri plants, the expression of JA-responsive pathogenesis-related genes,PBZ1 and PR1b, was induced after inoculation with M. grisea, although the JA-mediated wound response was suppressed. Furthermore, the application of JA methyl ester had no significant effect on the enhanced resistance in F78Ri plants.  
AP = Chromosome 3:10130997..10133342|
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<br>
CDS = 10131165..10131353,10131444..10131581,10132454..10132534,10132636..10132821,10132923..10133015<br>,10133094..10133160,10133266..10133342|
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GCID = <gbrowseImage1>
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==Labs working on this gene==
name=NC_008396:10130997..10133342
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*Department of Biology, Faculty of Sciences, Kyushu University, Hakozaki, Fukuoka, 812-8581 Japan
source=RiceChromosome03
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*College of Agriculture, Ibaraki University. 3-21-1 Chuo, Ami, Ibaraki, 300-0393 Japan
preset=GeneLocation
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*RIKEN, The Institute of Physical and Chemical Research, 2-1 Hirosawa, Wako-shi, Saitama, 351-0198 Japan
</gbrowseImage1>|
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*CEA, Cadarache, DSV-DEVM, Laboratoire des E´changes Membranaires et Signalisation, 13108 Saint-Paul-Lez Durance Cedex, France
GSID = <gbrowseImage2>
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*Plant-Microbe Interactions Research Unit, National Institute of Agrobiological Sciences (NIAS), Kannon-dai, Tsukuba, Ibaraki, 305-8602 Japan
name=NC_008396:10130997..10133342
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<br>
source=RiceChromosome03
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preset=GeneLocation
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==References==
</gbrowseImage2>|
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<references>
CDNA = <cdnaseq>ttctcaagcaacgccaagttgaacagcgtggttggacacatactccactcctccatccttgtcccataccacggctggaggattagccacaggacgcaccaccagaaccacggtcatgtcgagaaagacgagtcctggcaaccgctgtctgagaggctgtacaatagcctggactatatgacgaagaaattgaggttcaccatgccgtttcccatgctggcattcccattatacttgtttgcaaggagtccagggaaaaaaggttcacacttcaacccaagcagtgatctgttccaaccaaatgagaagaaggatgtgataacatcaactgcatcctggctggcaatggttgggattcttgctggtctgacctttgtgatggggcccctcaaaatgttaaagctctatgctgttccatacgtgatatttgttatgtggcttgattttgtcacatatttgcaccatcatggccatgaggacaagcttccttggtaccgtggaaaggagtggagctatctgcgcggaggattgacaacacttgatcgggactacgggtggatcaacaacgtacaccatgacattggaacccatgtcattcatcatcttttcccacaaatcccacattaccatcttgttgaggcgactgaggcagcaaaaccagtgctgggaaaatactacaaagagccagagaaatcagctcccctcccattccacttacttggtgtgctagcaaagagcttaaacagcgaccactatgttagtgacaccggagacgtagtgtactaccaaactgacttgaaaactagttcttctgcacaaagctcggattga</cdnaseq>|
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<ref name="ref1">
AA = <aaseq>FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDE                    SWQPLSERLYNSLDYMTKKLRFTMPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNE                    KKDVITSTASWLAMVGILAGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHED                    KLPWYRGKEWSYLRGGLTTLDRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATEAA                    KPVLGKYYKEPEKSAPLPFHLLGVLAKSLNSDHYVSDTGDVVYYQTDLKTSSSAQSSD                    </aaseq>|
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Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases
DNA = <dnaseqindica>1990..2178#1762..1899#809..889#522..707#328..420#183..249#1..77#ttctcaagcaacgccaagttgaacagcgtggttggacacatactccactcctccatccttgtcccataccacggctggtaagatgagcgcgcttcatgtattcctggttctttcgttttggacaggaattgttgttgaagctaaggaaggcagcatctcacattatttcgatccaatttcaggaggattagccacaggacgcaccaccagaaccacggtcatgtcgagaaagacgagtcctggcaaccggtaggtctttgtttttggttggttcatgaggaattctgcaattttgctcgatggttctctaatcgtgacaacctgcagctgtctgagaggctgtacaatagcctggactatatgacgaagaaattgaggttcaccatgccgtttcccatgctggcattcccattatacttggttaggccaagagcttcttgacattcattatcaactgtattagaggttcttattttgtaatatcatactaaattcctggtttggggttcatgtctatgcagtttgcaaggagtccagggaaaaaaggttcacacttcaacccaagcagtgatctgttccaaccaaatgagaagaaggatgtgataacatcaactgcatcctggctggcaatggttgggattcttgctggtctgacctttgtgatggggcccctcaaaatgttaaagctctatgctgttccatacgtggtaagagcatgatatttttattagtttctgcaaaatgataatttggattgatgggagtgtctggtgatgtatgtgttcacattttgtaaacccttatgcagatatttgttatgtggcttgattttgtcacatatttgcaccatcatggccatgaggacaagcttccttggtaccgtggaaaggtaaataatattattaattgtatgggtttgctatttgtaaatgattcaaggatggccacttaatgttgaaaaactaggagatagtccatttttgtttgttaaatgatggaaagtttcattattcgacattggtactgcatgtagaaactaagctaagactttaaaggtaacaagccgaattgatataccactcttccatctagttctggaaatacaactaaatgatttggtctacaccattataatatgttcccactattatcttagattcaaagttgtatatctctctctctttctccggttaatgcggtagtttctaggcttttagaggaattgtggtctctccttttagccctctctccattgtatattaggtcggcaaagtgatgattattatataaaccaaaaggtccatacgcatagcttaatggtatcctataaaatggagtatatgcgtgggcgtatcctgtctgatataaagcatgcaattattatatttttgacttaccttgaaaaaaatttcaaaaaaatagtggtagtgcatcatgcagcgtttgtagccaatatggtactgctgttgtctacatgcttggtagttatgtatcgccttatggctaaatgccaaatgtatcctttacttccaaccataagcaaggagcgaacgctacaaacctcagattccttgtggtcaagtacttgaaagagccccttttgtctccttccagagtgaaatgctaatggacatatcaaaacagtagttcctttttttaaccattttcctacgtagaatgaagtgcagattatcaaatacttttcactattttggagtttatatatttttaatgagctcacattttcttttgctctattaggagtggagctatctgcgcggaggattgacaacacttgatcgggactacgggtggatcaacaacgtacaccatgacattggaacccatgtcattcatcatcttttcccacaaatcccacattaccatcttgttgaggcggtaagaagccatccgccactcttgctgttttaatgaattattttgcaagaatcgcctactaagttatgttggtttggacctaacttgcagactgaggcagcaaaaccagtgctgggaaaatactacaaagagccagagaaatcagctcccctcccattccacttacttggtgtgctagcaaagagcttaaacagcgaccactatgttagtgacaccggagacgtagtgtactaccaaactgacttgaaaactagttcttctgcacaaagctcggattgacagaacattagtctctagcttatttttcgatttctcaggagcctgggcttaacatctgaccagcctcctgggcgttgagcctagaatttcaaagcattatcattgtaaaggagcatacatgtgtaattctttcgaatgattgaagacggagatcacctctgatgtaac</dnaseqindica>|
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</ref>
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056330.1 RefSeq:Os03g0290300]|
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}}
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</references>
[[Category:Genes]]
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<br>
[[Category:Japonica mRNA]]
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[[Category:Oryza Sativa Japonica Group]]
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==Structured Information==
[[Category:Japonica Genes]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
[[Category:Japonica Chromosome 3]]
 
[[Category:Chromosome 3]]
 

Latest revision as of 05:10, 22 October 2016

The rice Os03g0290300 was reported as OsFAD7 in 2007 [1] by researchers from the Japan.

Annotated Information

Gene Symbol

  • Os03g0290300<=>OsFAD7


Function

  • The researchers generated 18:3-deficient transgenic rice plants (F78Ri) with co-suppression of two u-3 fatty acid desaturases, OsFAD7 and OsFAD8.that synthesize 18:3. The F78Ri plants showed enhanced resistance to the phytopathogenic fungus Magnaporthe grisea.


Expression

  • In F78Ri plants, the expression of JA-responsive pathogenesis-related genes,PBZ1 and PR1b, was induced after inoculation with M. grisea, although the JA-mediated wound response was suppressed. Furthermore, the application of JA methyl ester had no significant effect on the enhanced resistance in F78Ri plants.


Labs working on this gene

  • Department of Biology, Faculty of Sciences, Kyushu University, Hakozaki, Fukuoka, 812-8581 Japan
  • College of Agriculture, Ibaraki University. 3-21-1 Chuo, Ami, Ibaraki, 300-0393 Japan
  • RIKEN, The Institute of Physical and Chemical Research, 2-1 Hirosawa, Wako-shi, Saitama, 351-0198 Japan
  • CEA, Cadarache, DSV-DEVM, Laboratoire des E´changes Membranaires et Signalisation, 13108 Saint-Paul-Lez Durance Cedex, France
  • Plant-Microbe Interactions Research Unit, National Institute of Agrobiological Sciences (NIAS), Kannon-dai, Tsukuba, Ibaraki, 305-8602 Japan


References

  1. Disease Resistance against Magnaporthe grisea is Enhanced in Transgenic Rice with Suppression of u-3 Fatty Acid Desaturases


Structured Information