Difference between revisions of "Os08g0512600"

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Please input one-sentence summary here.
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The rice '''''Os08g0512600''''' was reported as '''''CDKB2''''' in 2012 <ref name="ref1" /> by researchers from Japan.  
  
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''''Os08g0512600''''' '''<=>''' '''''CDKB2,OsCDKB2,Orysa;CDKB2;1, OsCDKB2;1, cdc2Os3, Orysa;CDKB;2'''''
 
===Function===
 
===Function===
Please input function information here.
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* CDKB2 is involved in mitosis and DNA damage response in rice
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* CDKB2 functions differently in Arabidopsis and rice in response to DNA damage. Arabidopsis may adopt endoreduplication as a survival strategy under genotoxic stress conditions, but rice may enhance DNA repair capacity upon genotoxic stress.
  
===Expression===
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You can also add sub-section(s) at will.
Please input expression information here.
 
  
===Evolution===
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==Labs working on this gene==
Please input evolution information here.
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* Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
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* Graduate School of Biological Sciences, Nara Institute of Science and Technology, Takayama 8916-5, Ikoma,Nara 630-0101, Japan
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==References==
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<references>
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* <ref name="ref1">
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Endo M, Nakayama S, Umeda-Hara C, Ohtsuki N, Saika H, Umeda M, Toki S. CDKB2
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is involved in mitosis and DNA damage response in rice. Plant J. 2012
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Mar;69(6):967-77. doi: 10.1111/j.1365-313X.2011.04847.x. Epub 2011 Dec 15. PubMed
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PMID: 22092531; PubMed Central PMCID: PMC3440594.
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</ref>
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</references>
  
You can also add sub-section(s) at will.
 
  
==Labs working on this gene==
 
Please input related labs here.
 
  
==References==
 
Please input cited references here.
 
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
GeneName = Os08g0512600|
 
Description = Protein cdc2 kinase|
 
Version = NM_001068755.1 GI:115477247 GeneID:4346016|
 
Length = 1839 bp|
 
Definition = Oryza sativa Japonica Group Os08g0512600, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:25507889..25509727|
 
CDS = 25507939..25508349,25508499..25508672,25508785..25508878,25508968..25509037,25509144..25509282<br>,25509445..25509537|
 
GCID = <gbrowseImage1>
 
name=NC_008401:25507889..25509727
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:25507889..25509727
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcggcgctccaccaccaggcggcggcggcgccggtgacgacgacgacggacgggggcgagctgcgggcgatggacctgtacgagaagctggagaaggtcggggaggggacgtacgggaaggtgtacaaggcgcgggagaaggcgacggggcggatcgtggcgctgaagaagacgcggctgccggaggacgacgagggcgtgccgccgacggcgctcagggaggtgtcgctgctgcggatgctgtcgcaggactcgcacgtggtgcgcctgctggacctcaagcaggggcagaacaaggagggccagaccatcctctacctcgtcttcgagtacatggacaccgacctcaagaagttcatccgcgcccaccgccagaatctccagaagatccccgtgcccaccgtcaagatcctgatgtaccagctctgcaagggcgttgctttctgccatggccgcggtgtgctgcaccgtgacctcaagccgcataacctgctcatggaccgcaagaccatggcgctcaagatcgccgacctcgggctcagccgctcgttcactgtccctctcaagaagtacacccacgagatcctgacgctgtggtacagggctcccgaggttcttcttggcgcggcacactactccactccggttgacatctggtctgtgggctgcatttttgctgagttggccactaaccaacctcttttcgctggagattccgaggttcagcagcttctgcacattttcaagttgctgggcaccccaaatgagcaagtttggccaggagtgagcaagctacctaactggcacgagtacccccagtggaatccctcgaaagtgtctgatcttgtccatggtctcgacgctgatgctcttgatcttcttgagaaaatgctgcagtacgagccgtcgaagcggatctctgcgaagaaggccatggagcatccctacttcaacgacgtgaacaaggagctctactga</cdnaseq>|
 
AA = <aaseq>MAALHHQAAAAPVTTTTDGGELRAMDLYEKLEKVGEGTYGKVYK                    AREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEG                    QTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDL                    KPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVD                    IWSVGCIFAELATNQPLFAGDSEVQQLLHIFKLLGTPNEQVWPGVSKLPNWHEYPQWN                    PSKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYFNDVNKELY</aaseq>|
 
DNA = <dnaseqindica>51..461#611..784#897..990#1080..1149#1256..1394#1557..1649#caaaccctaaatccacgcgcattccacaccacccaaccagcgagagagagatggcggcgctccaccaccaggcggcggcggcgccggtgacgacgacgacggacgggggcgagctgcgggcgatggacctgtacgagaagctggagaaggtcggggaggggacgtacgggaaggtgtacaaggcgcgggagaaggcgacggggcggatcgtggcgctgaagaagacgcggctgccggaggacgacgagggcgtgccgccgacggcgctcagggaggtgtcgctgctgcggatgctgtcgcaggactcgcacgtggtgcgcctgctggacctcaagcaggggcagaacaaggagggccagaccatcctctacctcgtcttcgagtacatggacaccgacctcaagaagttcatccgcgcccaccgccagaatctccagaagatccccgtgcccaccgtcaaggtatccatccggctacgaccgcttcagatctggatcaggggttcttcttcttgtttttttttcccgtgcacgcggggtgtttgtgtgaatgcctcgtccgtgtttgtctggttcgatgggggtgattgatgggggatgcgcttgtgcagatcctgatgtaccagctctgcaagggcgttgctttctgccatggccgcggtgtgctgcaccgtgacctcaagccgcataacctgctcatggaccgcaagaccatggcgctcaagatcgccgacctcgggctcagccgctcgttcactgtccctctcaagaagtacacccacgaggtccggttcctacatcctactactagcagtctctaatctgcttggtgatctgtttcgcatgcgtgatttctgttcttggatctcactgtgatgaatggattatttttcgcagatcctgacgctgtggtacagggctcccgaggttcttcttggcgcggcacactactccactccggttgacatctggtctgtgggctgcatttttggtacggtgaactgatattttggccactgtaaattatcatttcttcaggattcatgccttgacattgttgatatatcttgtgcattgcagctgagttggccactaaccaacctcttttcgctggagattccgaggttcagcagcttctgcacattttcaagtactgtgcctgtttcctcatcaattgttctttgtgctcgctggcatacttgaggggtataatcgtgtattcatggtggtgatttatcttgattgtttggttccaggttgctgggcaccccaaatgagcaagtttggccaggagtgagcaagctacctaactggcacgagtacccccagtggaatccctcgaaagtgtctgatcttgtccatggtctcgacgctgatgctcttgatcttcttgaggtttgtactatgctgcttttgctcgttgctatacttgattattttcttctacttcaaaatcgatgtacaatgttaggtgtaaactgtatcatgaacgtaaaatggaagaaaggtgttatcaattgaattgaatcctgacatggttcttgttttcgattgcagaaaatgctgcagtacgagccgtcgaagcggatctctgcgaagaaggccatggagcatccctacttcaacgacgtgaacaaggagctctactgaaggtcgattgatgatgttcaccaccaaggaaaaaaaaacgttgtgcgtcttcgtgactagcctgccctgaagcattgcttttgcttctagggggaaaagtactgtttgtgtctgtttcctggatgctgcttagtgtgcttaagaattcacttgtttgtgatggtaatgagtaatgacttaagaattcgac</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068755.1 RefSeq:Os08g0512600]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 14:02, 22 October 2016

The rice Os08g0512600 was reported as CDKB2 in 2012 [1] by researchers from Japan.

Annotated Information

Gene Symbol

  • Os08g0512600 <=> CDKB2,OsCDKB2,Orysa;CDKB2;1, OsCDKB2;1, cdc2Os3, Orysa;CDKB;2

Function

  • CDKB2 is involved in mitosis and DNA damage response in rice
  • CDKB2 functions differently in Arabidopsis and rice in response to DNA damage. Arabidopsis may adopt endoreduplication as a survival strategy under genotoxic stress conditions, but rice may enhance DNA repair capacity upon genotoxic stress.

You can also add sub-section(s) at will.

Labs working on this gene

  • Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
  • Graduate School of Biological Sciences, Nara Institute of Science and Technology, Takayama 8916-5, Ikoma,Nara 630-0101, Japan

References

  1. Endo M, Nakayama S, Umeda-Hara C, Ohtsuki N, Saika H, Umeda M, Toki S. CDKB2 is involved in mitosis and DNA damage response in rice. Plant J. 2012 Mar;69(6):967-77. doi: 10.1111/j.1365-313X.2011.04847.x. Epub 2011 Dec 15. PubMed PMID: 22092531; PubMed Central PMCID: PMC3440594.



Structured Information