|
|
| (2 intermediate revisions by 2 users not shown) |
| Line 1: |
Line 1: |
| − | Please input one-sentence summary here.
| + | The rice '''''Os11g0148500''''' was reported as '''''OsPK1''''' in 2013 <ref name="ref1" /> by researchers from China. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os11g0148500''''' '''''<=>''''' '''''OsPK1,PK1''''' |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * '''''ospk1''''' may undergo certain stress, especially oxidative stress. |
| − | | + | * The downregulation of '''''OsPK1''''' (a cytosolic pyruvate kinase) in ospk1 mutant results in variations in ABA/GA balance in rice and contributes to oxidative stress, which provide a new clue for understanding the connection of pyruvate kinase, ABA/GA balance, and oxidative stress in rice. |
| − | ===Expression=== | + | ===Mutation=== |
| − | Please input expression information here.
| + | * In ospk1, a dwarf rice mutant, the contents of ABA in the youngest leaf sheaths of 6-week-old seedlings and the uppermost internodes of heading stage plants were both increased, and the synthesis of bioactive GAs was suppressed, which may disharmonize ABA/GA balance. In ospk1, expression of three putative enzyme genes related to stress response was upregulated. |
| − | | + | * A strong browning symptom was observed in the second internode (Int2, counted from the top) and part of panicles of ospk1 at the late productive phase. Furthermore, higher levels of H2O2 in flag leaf and Int2 were observed in ospk1 than those in wild type. |
| − | ===Evolution===
| |
| − | Please input evolution information here.
| |
| − | | |
| − | You can also add sub-section(s) at will.
| |
| | | | |
| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * School of Life Sciences, Tsinghua University, Beijing 100084, China |
| | + | * Graduate School at Shenzhen, Tsinghua University, Shenzhen 518055, China |
| | + | * Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, Hainan University, Haikou, Hainan 570228, China |
| | + | ==References== |
| | + | <references> |
| | + | * <ref name="ref1"> |
| | + | Zhang, Yan, Feng Feng, and Chaozu He. "Downregulation of OsPK1 contributes to oxidative stress and the variations in ABA/GA balance in rice." Plant Molecular Biology Reporter 30.4 (2012): 1006-1013. |
| | + | </ref> |
| | + | </references> |
| | | | |
| − | ==References==
| |
| − | Please input cited references here.
| |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]] |
| − | GeneName = Os11g0148500|
| |
| − | Description = Pyruvate kinase family protein|
| |
| − | Version = NM_001072281.1 GI:115484174 GeneID:4349774|
| |
| − | Length = 4056 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os11g0148500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
| |
| − | AP = Chromosome 11:2221172..2225227|
| |
| − | CDS = 2221436..2221588,2221884..2221943,2222072..2222171,2222259..2222326,2222476..2222571<br>,2222710..2222798,2222869..2223013,2223207..2223296,2223378..2223449<br>,2223650..2223730,2223873..2224004,2224133..2224210,2224387..2224542<br>,2224628..2224725,2224819..2224915,2225036..2225104|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008404:2221172..2225227
| |
| − | source=RiceChromosome11
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008404:2221172..2225227
| |
| − | source=RiceChromosome11
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgcattcgacgaatctgctgctggaggagcccatcaggatggcatccatcctggagccatccaagccgagctttttcccggcgatgaccaagatcgtggggacgctgggtcccaagtcgcgcgccgtcgacaccatctcctcctgcctcaaggccggcatgtcggttgccaggttcgatttctcgtggggagacgctgagtaccaccaggaaaccctcgaaaacctcaagctcgccatcaagtccaccaagaagctctgtgctgtcatgctcgacactgtcggcccggagttgcaggtggtgaacaagagtgaggctgcaatctcccttgaagcgaatggcactgttgttctcacccctgaccaggggcaggaggcctcctccgaattgctgcccatcaacttctccgggcttgctaaggctctgaaaccaggtgctacaatttttgtggggcaatacttgttcactggcagtgagactacttcagtttggttagaggtttctgaagttaaaggagatgatgtggtttgtgtgataaaaaattcggctactctggctggttcactgttcaccctgcattgttctcagattcatatcgacttacctacactgtctgatgaggacaaggaggttatcagaagatggggagctccaaacaagattgacttcctctctctgtcttatacaagacacgcggaagatgtgcgacaggcacgtgagttcctctcaaagttaggcgaccttagccaaactcagatttttgccaaaattgagaatgttgagggtttgaatcattttgatgaaatcctgcaagaggcggatggtatcattctgtcaagaggaaaccttggaattgatcttccacctgaaaaggtgtttttgtttcaaaagtctgctctgcacaagtgcaacatggctggaaagcctgctgttgttactcgtgttgtggacagtatgactgacaacctcaggcctactcgtgcggaggctactgatgtggcaaatgctgtacttgacgggagtgatgccattctccttggtgctgagactctccgtggtctgtacccagttgagactatctcaattgtgggcaaaatttgcgctgaggcagagaaggtattcaaccaagatttatacttcaagcggactgtgaaatatgttggggagcccatgacccacttggagtctatcgcttcttctgcggtgcgagctgctatcaaagtgaaggcttctgtcattatttgcttcacatcatctggacgcgctgcaagactaattgccaagtacaggcccaccatgcctgttctatctgttgtcattcctcgtctgaaaacaaaccaactgaggtggagtttcactggcgcatttgaagcaagacaatcactcatagttagaggtctctttccgatgcttgctgatcctcgccatccagctgaatcgaccagcgctaccaatgagtcagttttgaaggttgctcttgaccatggcaaagcttccggtgtgatcaagtcgcatgatcgcgttgttgtctgccagaaagtgggtgattcctcggttgtgaagatcattgagctggacgattag</cdnaseq>|
| |
| − | AA = <aaseq>MHSTNLLLEEPIRMASILEPSKPSFFPAMTKIVGTLGPKSRAVD TISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKSTKKLCAVMLDTVGPELQVVN KSEAAISLEANGTVVLTPDQGQEASSELLPINFSGLAKALKPGATIFVGQYLFTGSET TSVWLEVSEVKGDDVVCVIKNSATLAGSLFTLHCSQIHIDLPTLSDEDKEVIRRWGAP NKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIENVEGLNHFDEILQEADGI ILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVA NAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKRTVKYVGEPMT HLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLRW SFTGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKASGVIKSHDRV VVCQKVGDSSVVKIIELDD</aaseq>|
| |
| − | DNA = <dnaseqindica>3640..3792#3285..3344#3057..3156#2902..2969#2657..2752#2430..2518#2215..2359#1932..2021#1779..1850#1498..1578#1224..1355#1018..1095#686..841#503..600#313..409#124..192#gctgcctcgattgattgattgattccttggagaagaagaaggaggaggaggagatcgagcagccgctgacgctcgtcgtctacctcccgatctgatccgaggagcgaagcgaacaggggcaagatgcattcgacgaatctgctgctggaggagcccatcaggatggcatccatcctggagccatccaagccggtaagacctcctcctcctcctcgccttcgatgatttcgcctcagatttttgctggttttggttctggttggaattggattgaatggaaccctaactcgcttaattaatttcgcctccaagagctttttcccggcgatgaccaagatcgtggggacgctgggtcccaagtcgcgcgccgtcgacaccatctcctcctgcctcaaggccggcatgtcgggtaacggatcagccagcttcgatctcctcttacctccacccattgcgcactgttctaatctaatcctttcttcgtgtgtggcggaaattgcagttgccaggttcgatttctcgtggggagacgctgagtaccaccaggaaaccctcgaaaacctcaagctcgccatcaagtccaccaagaagctctgtgctgtgagttctcctgacaattcattcatgatctactagttagtcttgctgtctactaacatttgggagtcctctcgttgttgcgcaggtcatgctcgacactgtcggcccggagttgcaggtggtgaacaagagtgaggctgcaatctcccttgaagcgaatggcactgttgttctcacccctgaccaggggcaggaggcctcctccgaattgctgcccatcaacttctccgggcttgctaaggtataccttcagtagttcagtgttatttatatgaaatattatgattgtttttacttttgttgcaatcagatcggtccttgactgtttcctagagaaattttgtatgttaccattacgtcaccgcaatttgtagcatctgctatgtgaaaaaaattgactctttttgtcctttgcaggctctgaaaccaggtgctacaatttttgtggggcaatacttgttcactggcagtgagactacttcagtttggttagaggtaaaaatcttcagcatgctaaaactggtgttctgtgtttgtgatgtgtaatgtgttacgtccttgttagtaggatgtgcttgctgtctacattttctgatacctaatctccattctgcttgatataggtttctgaagttaaaggagatgatgtggtttgtgtgataaaaaattcggctactctggctggttcactgttcaccctgcattgttctcagattcatatcgacttacctacactgtctgatgaggacaaggaggtaaggatcgatcttatctcttagctaactgtagcaatatgaatatttctagtaaaactattattatttctgaagtttgattccctcactcaaaccatctgtagtagtggtattaaagcttaagagtatgcactgattccaggttatcagaagatggggagctccaaacaagattgacttcctctctctgtcttatacaagacacgcggaagatgtgcgacaggttagtgactaattacagtatggatagagatgcattttcctcatatttcctgtttgcccgttgtgcttgaaagttttgcaagtctactgtacagtgaaaatattgcatgtctatattccaatatatactctcctctacctcttcatttggtatttgggaagaaattctaaacagtgctggaatttctccttacattacaggcacgtgagttcctctcaaagttaggcgaccttagccaaactcagatttttgccaaaattgagaatgttgaggtatttgcaacatactctttatatatttcttagccaactttgatttgttctaccacctatcaactctttaattatttgcagggtttgaatcattttgatgaaatcctgcaagaggcggatggtatcattctgtcaagaggaaaccttggaattgatcttccacctgaaaaggttagtatcttatttttgacttattttagcagttcagagggcattgattaattaatagtcctacatactctgcttctttttatttggctatgaagcttttagtggcagagtcctcaagttctttagcaagaattgctctgttttcaatttgatatgtaatttgcttactgatctttaacttctggtactgtaggtgtttttgtttcaaaagtctgctctgcacaagtgcaacatggctggaaagcctgctgttgttactcgtgttgtggacagtatgactgacaacctcaggcctactcgtgcggaggctactgatgtggcaaatgctgtacttgacggtgagttgtttgagttgttgatgatgttaattgccttctgaaaaatctgaaccatatattttttgttcagggagtgatgccattctccttggtgctgagactctccgtggtctgtacccagttgagactatctcaattgtgggcaaaatttgcgctgaggtgaattttctttctacttttatgttttttctttacaattttcaacaagtacaatgaaaattcacttcttgtttttctgtctatatcagtctgttagtaacatgatttagtcatatttgtttgtccattgtttcacaggcagagaaggtattcaaccaagatttatacttcaagcggactgtgaaatatgttggggagcccatgacccacttggagtctatcgcttcttctgcggtgtgtttcttctcttgttcccaaaatttcttaacgtttattgtgcacatataaaatatttttgactattccattgttttttgcttcacaaagtctttatatgaaacaagggtttcttagtctgaaattgtttcttgcctattttgcaggtgcgagctgctatcaaagtgaaggcttctgtcattatttgcttcacatcatctggacgcgctgcaaggtagaaagatgtgaatataaacaggataatggtgtagtttaatcaaaactaatttcatatttcatctggtatctgtaatgtctgcagactaattgccaagtacaggcccaccatgcctgttctatctgttgtcattcctcgtctgaaaacaaaccaactgaggtggagtttcactggcgcatttgaagtatgtaatcagtccttcccttctatgtttatgatcttttttctgatttttttcatgtaacatgctttctgttatctggtttatgcctgactattgtatctcatatttctcgtatgcttttctttcaggcaagacaatcactcatagttagaggtctctttccgatgcttgctgatcctcgccatccagtaagtactattgcaaaatatttgtgcaaaacacacttggtggattctttttcaattaaacaacacacggccttttatcatgggggaggaatgaactcttgcagatttctaatacatatcaatgcctattagatatatagcattaaacataacatgctagtcttattgcttgcatcatgtcccactgttattgaaatgttatctaccacaaatgtttgaaagcaatagcggtatatgcagttaagttccaaacgatttgctaggacccttgttgatctttcaccttgtcctgcaggctgaatcgaccagcgctaccaatgagtcagttttgaaggttgctcttgaccatggcaaagcttccggtgtgatcaagtcgcatgatcgcgttgttgtctgccagaaagtgggtgattcctcggttgtgaagatcattgagctggacgattagacgaccagcttgtgcttgttgatgatactacggcaagtcatggtttgccagattttgactaggccaaaaacgatgcttcttggctatatgtataattcctatataggctttccaatgagcagtttttcctatggtgtaatcataggatttgccttactatttgaaacaactacgttttagttatgtaagttatcagatttcaatgcatcatatcacttcgatgggcaaatggaataatgaaatcggtactgtaccctttggtct</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001072281.1 RefSeq:Os11g0148500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 11]]
| |
| − | [[Category:Chromosome 11]]
| |
