Difference between revisions of "Os02g0811000"

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(Created page with "{{JaponicaGene| GeneName = Os02g0811000| Description = Protein of unknown function DUF640 domain containing protein| Version = NM_001055008.1 GI:115449464 GeneID:4331099| ...")
 
 
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{{JaponicaGene|
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The rice '''''Os02g0811000''''' was reported as '''''BLS1''''' in 2012 <ref name="ref1" /> by researchers from China.
GeneName = Os02g0811000|
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Description = Protein of unknown function DUF640 domain containing protein|
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==Annotated Information==
Version = NM_001055008.1 GI:115449464 GeneID:4331099|
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[[File:185-Os02g0811000.png|right|thumb|427px|'''Figure 8.''' ''Subcellular localization of BLS1.<ref name="ref1" />.'']]
Length = 2100 bp|
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===Gene Symbol===
Definition = Oryza sativa Japonica Group Os02g0811000, complete gene.|
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*'''''Os02g0811000''''' '''''<=>''''' '''''OsBLS1,BLS1'''''
Source = Oryza sativa Japonica Group
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===Function===
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* '''''BLS1''''' is required for lateral development of the lemma and palea in Rice, and does not function at stages of floral-organ initiation and patterning
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===Phenotypic analysis===
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* In '''''bls1''''' mutant, floral-organ identity and floral-organ patterning are normal, and the defects occur at the stage of the lemma and palea expansion, whereas the other aspects of floral architecture and form are not affected.
 +
 
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===Expression===
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* '''''BLS1''''' is expressed strongly in young inflorescence, specifically the young lemmas and paleas of spikelets.
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===Subcellular localization===
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* Subcellular localization analysis showed that '''''BLS1''''' is localized in the nucleus.
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== Labs working on this gene ==
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* National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science,  Chinese Academy of Agricultural Sciences, Beijing 100081, China.
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* National Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing 210095, China
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== References ==
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<references>
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* <ref name="ref1">
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Ma, Xiaoding, et al. "BEAK LIKE SPIKELET1 is required for lateral development of lemma and palea in rice." Plant Molecular Biology Reporter 31.1 (2013): 98-108.
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</ref>
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</references>
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==Structured Information==
  
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
 
AP = Chromosome 2:35574485..35576584|
 
CDS = 35575238..35575984|
 
GCID = <gbrowseImage1>
 
name=NC_008395:35574485..35576584
 
source=RiceChromosome02
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008395:35574485..35576584
 
source=RiceChromosome02
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggatcgtcaccatcaccaccaccaccaccaccaccatcacatgatgtcgggcggcgggcaagacccggcggcgggggacggcggcgccggcggcgccacgcaggacagcttcttcctcggcccggccgcggccgccatgttctccggcgccgggtcgtcgtcgtcgggcgcggggacgtcggcgggaggcggcggcggcgggccatcgccgtccagctcgtcgccgtcgctgagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaaccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaagtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggccaccccaacccgccggcgccatgcccgtgcccgctccgccaagcctggggctccctcgacgcgctcatcggccgcctccgcgccgcctacgaggagaacggcggcacgccggagatgaaccccttcggcgcccgcgccgtccgcctctacctgcgcgaggtgcgcgagacgcaggccagggcgagggggatcagctacgagaagaagaagcgcaagaagccctcgtccgccggcgccggagccgggccctcgtccgaggggagcccgccgccacccggcggctcggccagcggcggcggcgacacgtcggcgtcgccgcagttcatcatcccgtga</cdnaseq>|
 
AA = <aaseq>MDRHHHHHHHHHHHMMSGGGQDPAAGDGGAGGATQDSFFLGPAA                    AAMFSGAGSSSSGAGTSAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPP                    LSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALI                    GRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGA                    GPSSEGSPPPPGGSASGGGDTSASPQFIIP</aaseq>|
 
DNA = <dnaseqindica>601..1347#atttctacctcacacacctagctagcaagtaggctctctcactccacacccacactactcctcccaggctgcctgcctaaaaggctagacctatccatctcttccccccactcctccagcatcgccatcatccactgttcatccactccatctctctctctctctctctctctctctctctccatcgatccctgcaggttcttgctgctgctgctgctgccttgcttgctgtcaagcatggcttgaccacctgagagcgaggagagcatagcgtagtacttggctagctgctgttcaattcctcatggatgattggaggatcgctagctaggtcgcccggatccacggacacctctcctcgtctcgtgctcgtgcatgccaagatcgatcgatcccagctgctgctgcgagtggagcagtggaggaggagatcggctgctacctgacctagatcgggaagcagattcatccggtacatgttatatatagatatagatcgttgcttaggttcttctcttcttgtttgatttcgtcggagcaagaaatgatgcttgcttcttgtgattcaggttgcattacggcggcgaggcgagggcgaggatggatcgtcaccatcaccaccaccaccaccaccaccatcacatgatgtcgggcggcgggcaagacccggcggcgggggacggcggcgccggcggcgccacgcaggacagcttcttcctcggcccggccgcggccgccatgttctccggcgccgggtcgtcgtcgtcgggcgcggggacgtcggcgggaggcggcggcggcgggccatcgccgtccagctcgtcgccgtcgctgagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaaccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaagtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggccaccccaacccgccggcgccatgcccgtgcccgctccgccaagcctggggctccctcgacgcgctcatcggccgcctccgcgccgcctacgaggagaacggcggcacgccggagatgaaccccttcggcgcccgcgccgtccgcctctacctgcgcgaggtgcgcgagacgcaggccagggcgagggggatcagctacgagaagaagaagcgcaagaagccctcgtccgccggcgccggagccgggccctcgtccgaggggagcccgccgccacccggcggctcggccagcggcggcggcgacacgtcggcgtcgccgcagttcatcatcccgtgagttcttctcgatccccatcgccatctccgcatctccattgatcgatcgagcctcgcagcaagaaattccaatctccttggcagaaatgccatcttgctttgccagtacaaggcatcatatctcttctttcctcctgaattggtttcgatctctcccattttgcaaaaaaagatttctcctctttttaatttcatctctgtctcgctttctaagctaggacgaaggtcatgcatgagtgagtacttagtttaattcttgtttttttccttagctttgggacgtcaattaattggtagctgctgtcttcgatcgatctcgtcccgtttggtttaattattttgatgcaagaactggagtaaatttgatgagaatctcaagctagctagcctaattaggagttgtaatatttgttttagtctgggggatttgcaagaacaaaagtagcagaagctgtaggcatagcaagctagctagtgttagtatctgtagaatttgttcttgtaatagcttgtcgccaagctagccaagtgcagtggcgtcagcaatgcttccttctatctatcatgtactagtgatgatgtcttggtcttcctttcttggttgagcaaaagggcaaaaagggagagatcgactagctgatgagatgatgagtgatttcaattggtagcttaattaagacagaaacaacatgtgttatgtgtacttgtcctgggaacagattccatatatatgccaaatgctttaatttgggct</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055008.1 RefSeq:Os02g0811000]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 13:00, 28 October 2016

The rice Os02g0811000 was reported as BLS1 in 2012 [1] by researchers from China.

Annotated Information

Figure 8. Subcellular localization of BLS1.[1].

Gene Symbol

  • Os02g0811000 <=> OsBLS1,BLS1

Function

  • BLS1 is required for lateral development of the lemma and palea in Rice, and does not function at stages of floral-organ initiation and patterning

Phenotypic analysis

  • In bls1 mutant, floral-organ identity and floral-organ patterning are normal, and the defects occur at the stage of the lemma and palea expansion, whereas the other aspects of floral architecture and form are not affected.

Expression

  • BLS1 is expressed strongly in young inflorescence, specifically the young lemmas and paleas of spikelets.

Subcellular localization

  • Subcellular localization analysis showed that BLS1 is localized in the nucleus.

Labs working on this gene

  • National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
  • National Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing 210095, China

References

  1. 1.0 1.1 Ma, Xiaoding, et al. "BEAK LIKE SPIKELET1 is required for lateral development of lemma and palea in rice." Plant Molecular Biology Reporter 31.1 (2013): 98-108.

Structured Information