Difference between revisions of "Os02g0811000"

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(Created page with "{{JaponicaGene| GeneName = Os02g0811000| Description = Protein of unknown function DUF640 domain containing protein| Version = NM_001055008.1 GI:115449464 GeneID:4331099| ...")
 
 
(24 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''''Os02g0811000''''' was reported as '''''BLS1''''' in 2012 <ref name="ref1" /> by researchers from China.
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GeneName = Os02g0811000|
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Description = Protein of unknown function DUF640 domain containing protein|
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==Annotated Information==
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Version = NM_001055008.1 GI:115449464 GeneID:4331099|
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[[File:185-Os02g0811000.png|right|thumb|427px|'''Figure 8.''' ''Subcellular localization of BLS1.<ref name="ref1" />.'']]
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Length = 2100 bp|
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===Gene Symbol===
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Definition = Oryza sativa Japonica Group Os02g0811000, complete gene.|
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*'''''Os02g0811000''''' '''''<=>''''' '''''OsBLS1,BLS1'''''
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Source = Oryza sativa Japonica Group
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===Function===
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* '''''BLS1''''' is required for lateral development of the lemma and palea in Rice, and does not function at stages of floral-organ initiation and patterning
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===Phenotypic analysis===
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* In '''''bls1''''' mutant, floral-organ identity and floral-organ patterning are normal, and the defects occur at the stage of the lemma and palea expansion, whereas the other aspects of floral architecture and form are not affected.
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===Expression===
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* '''''BLS1''''' is expressed strongly in young inflorescence, specifically the young lemmas and paleas of spikelets.
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===Subcellular localization===
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* Subcellular localization analysis showed that '''''BLS1''''' is localized in the nucleus.
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== Labs working on this gene ==
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* National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science,  Chinese Academy of Agricultural Sciences, Beijing 100081, China.
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* National Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing 210095, China
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== References ==
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<references>
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* <ref name="ref1">
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Ma, Xiaoding, et al. "BEAK LIKE SPIKELET1 is required for lateral development of lemma and palea in rice." Plant Molecular Biology Reporter 31.1 (2013): 98-108.
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</ref>
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</references>
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==Structured Information==
  
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
 
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AP = Chromosome 2:35574485..35576584|
 
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CDS = 35575238..35575984|
 
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GCID = <gbrowseImage1>
 
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name=NC_008395:35574485..35576584
 
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source=RiceChromosome02
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008395:35574485..35576584
 
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source=RiceChromosome02
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggatcgtcaccatcaccaccaccaccaccaccaccatcacatgatgtcgggcggcgggcaagacccggcggcgggggacggcggcgccggcggcgccacgcaggacagcttcttcctcggcccggccgcggccgccatgttctccggcgccgggtcgtcgtcgtcgggcgcggggacgtcggcgggaggcggcggcggcgggccatcgccgtccagctcgtcgccgtcgctgagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaaccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaagtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggccaccccaacccgccggcgccatgcccgtgcccgctccgccaagcctggggctccctcgacgcgctcatcggccgcctccgcgccgcctacgaggagaacggcggcacgccggagatgaaccccttcggcgcccgcgccgtccgcctctacctgcgcgaggtgcgcgagacgcaggccagggcgagggggatcagctacgagaagaagaagcgcaagaagccctcgtccgccggcgccggagccgggccctcgtccgaggggagcccgccgccacccggcggctcggccagcggcggcggcgacacgtcggcgtcgccgcagttcatcatcccgtga</cdnaseq>|
 
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AA = <aaseq>MDRHHHHHHHHHHHMMSGGGQDPAAGDGGAGGATQDSFFLGPAA                    AAMFSGAGSSSSGAGTSAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPP                    LSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALI                    GRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGA                    GPSSEGSPPPPGGSASGGGDTSASPQFIIP</aaseq>|
 
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DNA = <dnaseqindica>601..1347#atttctacctcacacacctagctagcaagtaggctctctcactccacacccacactactcctcccaggctgcctgcctaaaaggctagacctatccatctcttccccccactcctccagcatcgccatcatccactgttcatccactccatctctctctctctctctctctctctctctctccatcgatccctgcaggttcttgctgctgctgctgctgccttgcttgctgtcaagcatggcttgaccacctgagagcgaggagagcatagcgtagtacttggctagctgctgttcaattcctcatggatgattggaggatcgctagctaggtcgcccggatccacggacacctctcctcgtctcgtgctcgtgcatgccaagatcgatcgatcccagctgctgctgcgagtggagcagtggaggaggagatcggctgctacctgacctagatcgggaagcagattcatccggtacatgttatatatagatatagatcgttgcttaggttcttctcttcttgtttgatttcgtcggagcaagaaatgatgcttgcttcttgtgattcaggttgcattacggcggcgaggcgagggcgaggatggatcgtcaccatcaccaccaccaccaccaccaccatcacatgatgtcgggcggcgggcaagacccggcggcgggggacggcggcgccggcggcgccacgcaggacagcttcttcctcggcccggccgcggccgccatgttctccggcgccgggtcgtcgtcgtcgggcgcggggacgtcggcgggaggcggcggcggcgggccatcgccgtccagctcgtcgccgtcgctgagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaaccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaagtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggccaccccaacccgccggcgccatgcccgtgcccgctccgccaagcctggggctccctcgacgcgctcatcggccgcctccgcgccgcctacgaggagaacggcggcacgccggagatgaaccccttcggcgcccgcgccgtccgcctctacctgcgcgaggtgcgcgagacgcaggccagggcgagggggatcagctacgagaagaagaagcgcaagaagccctcgtccgccggcgccggagccgggccctcgtccgaggggagcccgccgccacccggcggctcggccagcggcggcggcgacacgtcggcgtcgccgcagttcatcatcccgtgagttcttctcgatccccatcgccatctccgcatctccattgatcgatcgagcctcgcagcaagaaattccaatctccttggcagaaatgccatcttgctttgccagtacaaggcatcatatctcttctttcctcctgaattggtttcgatctctcccattttgcaaaaaaagatttctcctctttttaatttcatctctgtctcgctttctaagctaggacgaaggtcatgcatgagtgagtacttagtttaattcttgtttttttccttagctttgggacgtcaattaattggtagctgctgtcttcgatcgatctcgtcccgtttggtttaattattttgatgcaagaactggagtaaatttgatgagaatctcaagctagctagcctaattaggagttgtaatatttgttttagtctgggggatttgcaagaacaaaagtagcagaagctgtaggcatagcaagctagctagtgttagtatctgtagaatttgttcttgtaatagcttgtcgccaagctagccaagtgcagtggcgtcagcaatgcttccttctatctatcatgtactagtgatgatgtcttggtcttcctttcttggttgagcaaaagggcaaaaagggagagatcgactagctgatgagatgatgagtgatttcaattggtagcttaattaagacagaaacaacatgtgttatgtgtacttgtcctgggaacagattccatatatatgccaaatgctttaatttgggct</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055008.1 RefSeq:Os02g0811000]|
 
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}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 13:00, 28 October 2016

The rice Os02g0811000 was reported as BLS1 in 2012 [1] by researchers from China.

Annotated Information

Figure 8. Subcellular localization of BLS1.[1].

Gene Symbol

  • Os02g0811000 <=> OsBLS1,BLS1

Function

  • BLS1 is required for lateral development of the lemma and palea in Rice, and does not function at stages of floral-organ initiation and patterning

Phenotypic analysis

  • In bls1 mutant, floral-organ identity and floral-organ patterning are normal, and the defects occur at the stage of the lemma and palea expansion, whereas the other aspects of floral architecture and form are not affected.

Expression

  • BLS1 is expressed strongly in young inflorescence, specifically the young lemmas and paleas of spikelets.

Subcellular localization

  • Subcellular localization analysis showed that BLS1 is localized in the nucleus.

Labs working on this gene

  • National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
  • National Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing 210095, China

References

  1. ↑ 1.0 1.1 Ma, Xiaoding, et al. "BEAK LIKE SPIKELET1 is required for lateral development of lemma and palea in rice." Plant Molecular Biology Reporter 31.1 (2013): 98-108.

Structured Information