Difference between revisions of "Os06g0138700"
Chenxi Sang (talk | contribs) (→Labs working on this gene) |
|||
| (2 intermediate revisions by 2 users not shown) | |||
| Line 1: | Line 1: | ||
| − | + | The rice '''''Os06g0138700''''' was reported as '''''DDF1''''' in 2012 <ref name="ref1" /> by researchers from China. | |
==Annotated Information== | ==Annotated Information== | ||
| + | ===Gene Symbol=== | ||
| + | *'''''Os06g0138700''''' '''<=>''' '''''OsDDF1,DDF1''''' | ||
===Function=== | ===Function=== | ||
| − | + | * The rice '''''DDF1''''' encodes an F-box protein. | |
| − | + | * '''''DDF1''''' controls organ size by regulating both cell division and cell expansion. | |
| + | * '''''DDF1''''' is a crucial genetic factor with pleiotropic functions for both vegetative growth and floral organ specification in rice. | ||
| + | * '''''DDF1''''' also negatively regulates the Arabidopsis LFY ortholog '''''APO2''''', implying a functional connection between '''''DDF1''''' and '''''APO2'''''. | ||
| + | ===Phenotypic analysis=== | ||
| + | * The mutant dwarf and deformed flower 1-1 ('''''ddf1'''''-1) is abnormal in both vegetative and reproductive development, with significant size reduction in all organs except the spikelet. | ||
| + | * In the '''''ddf1'''''-1 spikelet, the specification of floral organs in whorls 2 and 3 is altered, with most lodicules and stamens being transformed into glume-like organs and pistil-like organs, respectively, but the specification of lemma/palea and pistil in whorls 1 and 4 is not affected. | ||
| + | * Consistent with the mutant floral phenotype, '''''DDF1''''' positively regulates B-class genes OsMADS4 and OsMADS16, and negatively regulates pistil specifica- tion gene DL. | ||
===Expression=== | ===Expression=== | ||
| − | + | * '''''DDF1''''' is expressed in almost all vegetative and reproductive tissues. | |
| − | === | + | ===Subcellular localization=== |
| − | + | * Subcellular localizatio analysis showed that '''''DDF1''''' was anchored in the nucleolus | |
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | * Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, Fujian Agriculture & Forestry University, Fuzhou 350002, China, | |
| + | * Fujian Provincial Key Laboratory of Molecular Marker-Assisted Breeding of Rice, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China, and | ||
| + | * State Key Laboratory of Molecular Developmental Biology, Institute of Genetics & Developmental Biology, Chinese Academy of Sciences and National Center for Plant Gene Research, Beijing 100101, China | ||
==References== | ==References== | ||
| − | + | <references> | |
| + | * <ref name="ref1"> | ||
| + | Duan Y, Li S, Chen Z, Zheng L, Diao Z, Zhou Y, Lan T, Guan H, Pan R, Xue Y, Wu | ||
| + | W. Dwarf and deformed flower 1, encoding an F-box protein, is critical for | ||
| + | vegetative and floral development in rice (Oryza sativa L.). Plant J. 2012 | ||
| + | Dec;72(5):829-42. doi: 10.1111/j.1365-313X.2012.05126.x. PubMed PMID: 22897567. | ||
| + | </ref> | ||
| + | </references> | ||
| + | |||
==Structured Information== | ==Structured Information== | ||
| − | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | [[Category:Genes]] | ||
| − | |||
| − | [[Category:Oryza Sativa Japonica Group]] | ||
| − | [[Category:Japonica | ||
| − | |||
| − | |||
Latest revision as of 13:25, 28 October 2016
The rice Os06g0138700 was reported as DDF1 in 2012 [1] by researchers from China.
Contents
Annotated Information
Gene Symbol
- Os06g0138700 <=> OsDDF1,DDF1
Function
- The rice DDF1 encodes an F-box protein.
- DDF1 controls organ size by regulating both cell division and cell expansion.
- DDF1 is a crucial genetic factor with pleiotropic functions for both vegetative growth and floral organ specification in rice.
- DDF1 also negatively regulates the Arabidopsis LFY ortholog APO2, implying a functional connection between DDF1 and APO2.
Phenotypic analysis
- The mutant dwarf and deformed flower 1-1 (ddf1-1) is abnormal in both vegetative and reproductive development, with significant size reduction in all organs except the spikelet.
- In the ddf1-1 spikelet, the specification of floral organs in whorls 2 and 3 is altered, with most lodicules and stamens being transformed into glume-like organs and pistil-like organs, respectively, but the specification of lemma/palea and pistil in whorls 1 and 4 is not affected.
- Consistent with the mutant floral phenotype, DDF1 positively regulates B-class genes OsMADS4 and OsMADS16, and negatively regulates pistil specifica- tion gene DL.
Expression
- DDF1 is expressed in almost all vegetative and reproductive tissues.
Subcellular localization
- Subcellular localizatio analysis showed that DDF1 was anchored in the nucleolus
You can also add sub-section(s) at will.
Labs working on this gene
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, Fujian Agriculture & Forestry University, Fuzhou 350002, China,
- Fujian Provincial Key Laboratory of Molecular Marker-Assisted Breeding of Rice, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China, and
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics & Developmental Biology, Chinese Academy of Sciences and National Center for Plant Gene Research, Beijing 100101, China
References
- ↑ Duan Y, Li S, Chen Z, Zheng L, Diao Z, Zhou Y, Lan T, Guan H, Pan R, Xue Y, Wu W. Dwarf and deformed flower 1, encoding an F-box protein, is critical for vegetative and floral development in rice (Oryza sativa L.). Plant J. 2012 Dec;72(5):829-42. doi: 10.1111/j.1365-313X.2012.05126.x. PubMed PMID: 22897567.
