|
|
| (6 intermediate revisions by 2 users not shown) |
| Line 1: |
Line 1: |
| − | Please input one-sentence summary here.
| + | The rice '''Os03g0786100''' was reported as '''OsGLO1''' in 2009 <ref name="ref1" /> by researchers from the China. |
| − | | + | <br> |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''Os03g0786100 <=> OsGLO1''' |
| | + | <br> |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | *GLO is a typical photorespiratory enzyme and that it can exert a strong regulation over photosynthesis, possibly through a feed-back inhibition on Rubisco activase, and that the glyoxylate cycle may be partially activated to compensate for the photorespiratory glyoxylate when GLO is suppressed in rice. |
| | + | <br> |
| | | | |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | *Various expression analyses identified that Rubisco activase was transcriptionally suppressed in the GLO-suppressed plants, consistent with the decreased Rubisco activation states. While the substrate glycolate accumulated substantially, few changes were observed for the product glyoxylate, and for some other downstream metabolites or genes as well in the transgenic plants. |
| − | | + | <br> |
| − | ===Evolution===
| |
| − | Please input evolution information here.
| |
| − | | |
| − | You can also add sub-section(s) at will.
| |
| | | | |
| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *Laboratory of Molecular Plant Physiology, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China |
| − | | + | *Key Laboratory of Plant Functional Genomics and Biotechnology, Education Department of Guangdong Province, South China Agricultural University; Guangzhou 510642, China |
| | + | *College of Life Sciences, South China Normal University, Guangzhou 510640, China |
| | + | *Department of Biology, San Francisco State University, 1600 Holloway Avenue, San Francisco, CA 94132, USA |
| | + | <br> |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | <ref name="ref1"> |
| | + | Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice |
| | + | </ref> |
| | | | |
| | + | </references> |
| | + | <br> |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0786100|
| |
| − | Description = Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)|
| |
| − | Version = NM_001058022.1 GI:115455772 GeneID:4334349|
| |
| − | Length = 3642 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0786100, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:33479486..33483127|
| |
| − | CDS = 33480206..33480345,33480836..33480960,33481201..33481247,33481380..33481457,33481554..33481678<br>,33481782..33481848,33481947..33482009,33482133..33482202,33482302..33482507<br>,33482598..33482786|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:33479486..33483127
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:33479486..33483127
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgggggagatcaccaatgtcatggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactacgcctctggagctgaggatgagtggactctcaaggagaacagggaggcattctccaggatcttgtttcgtccccgcatcctgatcgatgtctcaaagatcgacatgtccgcaactgttcttgggttcaagatatcaatgcccataatgattgctcccagtgccatgcagaagatggctcaccctgacggagagtatgcaacagccagggcagcttcagcagcaggaactataatgacactgtcatcttgggctacttcaagtgttgaggaggtcgcctcaactggaccaggaatccgtttcttccagctatacgtgtacaaggacaggaatgtggttgagcagcttgtcagaagagccgagagagctgggttcaaggcgatcgcactgaccgtggacactccgcgactgggacgcagggaagctgacatcaagaacaggttcgttctgccaccatacttgacactgaagaatttcgaaggcctggacctcgcagagatggacaagagcaacgattccgggctggcctcctacgtcgccgggcagatcgatcgcacgctcagctggaaggatgtgaagtggctgcagagcatcacgtcgctgccgatcctcgtcaagggcgtcatcaccgcggaggatgcgaggctggccgtgcactccggcgcggcggggatcatcgtgtcgaaccacggcgcgcggcagctggactacgtcccggcgaccatcagcgccctggaggaggtggtcacggcggcggcggggcgcatcccggtgtacctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcatcgggaggccggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgatgcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgcccacatctacaccgacgccgaccgcctcgcccgccccttccccaggttgtga</cdnaseq>|
| |
| − | AA = <aaseq>MGEITNVMEYQAIAKQKLPKMIYDYYASGAEDEWTLKENREAFS RILFRPRILIDVSKIDMSATVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAAGT IMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVEQLVRRAERAGFKAIALTVDTP RLGRREADIKNRFVLPPYLTLKNFEGLDLAEMDKSNDSGLASYVAGQIDRTLSWKDVK WLQSITSLPILVKGVITAEDARLAVHSGAAGIIVSNHGARQLDYVPATISALEEVVTA AAGRIPVYLDGGVRRGTDVFKALALGAAGVFIGRPVVFALAAEGEAGVRNVLRMMREE FELTMALSGCTSLADITRAHIYTDADRLARPFPRL</aaseq>|
| |
| − | DNA = <dnaseqindica>721..860#1351..1475#1716..1762#1895..1972#2069..2193#2297..2363#2462..2524#2648..2717#2817..3022#3113..3301#gtgcagaaactcaaagatctctctccctcacctatattacctgcaccaacaccactgaccactccctcctcctgttcttgctccttcctcccagtgtctctcaaggtaagataagctacatgcatatcagtgtacagaatttgcttttctatcggtttgatttgagtcatcttttctttcgtgatttcttcagtcgtaatagttcttctggcgtggccaagaatttgttgcacgcatagtttcaaaatgaccaaattattaggatctattgcatgttgtcatctttgtttctgattgattttttagttctcttgtttgtatgagtgatgagaggtttttttatatttgttcagttccaacgtcgtttgatcgttggtacagatgatgaagatttctttttttgtttatcatttctgttaaaagaataccacatattttctgcagaaacaaaaaaaatgggtatctgcatgcactccaagagaaaggagtcccttggtttctctgatgatggaaagtctttttttttttgtttaccttgttgctatgaacttttagcagacttgcatagttgcatgtgttctatcagaaaaaaaaaagaataagttatcatcatgcatgtagatgattgttattttagtaggaggaaagctatagctcaattcttttgacagtgctgttctttgggtgtagagcggtgcagggttcacaaggcaggagaaaatgggggagatcaccaatgtcatggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactacgcctctggagctgaggatgagtggactctcaaggagaacagggaggcattctccaggatcttgtaagccataattcttaattacttgattgcttgacatgttacaaattaattgcaccactactcctccctatgccatattgtgcatcaaaatatttcatctgtgtaaatgcctccctatgagtctaccatgtacaagttcaatctgatagctcatagttaagtaggatggatcgacaaaacattactagttgtccaatcctgaccactcggtctttttactaggtagactagtttagcatgagcacatcgtattcttttcaaaatagagttaagggcatttcattagttcagtaaaattgccaatcagtgaaactctcagctaatcataatcttattcccagacccagaatatctatcatacaacatctaacgttatcactttctcctacgaaagctttagcaaatgacttaaatttttcaatcacattccttaggttgaacatttgttaatttttcagcccacaatctgactgtaaccttttctggctaggtttcgtccccgcatcctgatcgatgtctcaaagatcgacatgtccgcaactgttcttgggttcaagatatcaatgcccataatgattgctcccagtgccatgcagaagatggctcaccctgacggtacatatgccatttcaattatgttgcttaattgttgtacagccttacatttagcccaaactcaaaaccaaaagtaatttcatccatcaacattagcatattatattgttttaaaaaaaagcatattactactacaaaaactgaaaataaactgaagttgttagcatgtaacaagcaagcacatgatctacattgatctttgcatagaattgggctaactaaaataccatatgtattcaggagagtatgcaacagccagggcagcttcagcagcaggaactataatggtatgctatctacatgttgtcatgttcaatagcaaacaacatttccttggatgcataacgaaaccaaaccaaaacagaaattcaaacttgcatgaacgccaatgttaatttggtatcgccttcatgtttcagacactgtcatcttgggctacttcaagtgttgaggaggtcgcctcaactggaccaggaatccgtttcttccagctatacgtaaaccatatcatatcactctgctcatgtagcatactttggctacattttattttcgtatctcattttcttgtatgatcttgcatacatctacaggtgtacaaggacaggaatgtggttgagcagcttgtcagaagagccgagagagctgggttcaaggcgatcgcactgaccgtggacactccgcgactgggacgcagggaagctgacatcaagaacaggtgagttcttaactagccacctgaatttggcacgatctagaaatgaatttcagcgagttgtcgtaaatgttaagtgatgtgatcaatggctgcgttgttgcaggttcgttctgccaccatacttgacactgaagaatttcgaaggcctggacctcgcagagatggacaaggtcggttaattcagccaaaaaaaaaaacagttattttctctgaagaaaaaatggtctgttctatgcagcaatttgaaccatttcgttggcatttgcagagcaacgattccgggctggcctcctacgtcgccgggcagatcgatcgcacgctcagctggaaggtaatgatcaatgctcatcgatgctacaacaaacttaccagcaaattaacttatcgaaattactgttcttgatgctaagatcgggagaaattctgacggtgtgtgttgttgatgatgatgcaggatgtgaagtggctgcagagcatcacgtcgctgccgatcctcgtcaagggcgtcatcaccgcggaggatggtaggatagcttcctgtttcttgcatttcttctgatttgactgatttgaaatccacaaaatcacaaaggaaactgatgcgtttatgcgcgcgtgcgcagcgaggctggccgtgcactccggcgcggcggggatcatcgtgtcgaaccacggcgcgcggcagctggactacgtcccggcgaccatcagcgccctggaggaggtggtcacggcggcggcggggcgcatcccggtgtacctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcgtaagtccttcgatcgatagccgatgatctatggcgtgatacatgtcatcgtcgtcgtcgtcgtcttgatggattgaattgcgtttgcagatcgggaggccggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgatgcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgcccacatctacaccgacgccgaccgcctcgcccgccccttccccaggttgtgaggacctcgccgccgccgccgccggcgaactctagccaaacaataaacaatatcgacgacgccagagagcacgccgattaattaattaggtaatttttgcaaaagaatctcgtcgatccacacgcgcgcaagcaacacacgtactccgtgcacccctcgtaactgggtcgttcatgctcttaatcccaacgattaattatactggtataatctttgtaatttcgagtactgtacacctatttggcatctgtatatctcgccttaagatatttacggaaccggtttatatactcctttaatttttaattaacggagttcaacatatatataagttacttcatg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058022.1 RefSeq:Os03g0786100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
