Difference between revisions of "Os05g0149400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0149400| Description = Similar to 1-aminocyclopropane-1-carboxylic acid oxidase| Version = NM_001061192.1 GI:115462114 GeneID:4337818| Leng...")
 
 
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{{JaponicaGene|
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The rice '''Os04g0578000''' was reported as ''' OsACS2''' in 2011 <ref name="ref1" /> by researchers from the Japan.
GeneName = Os05g0149400|
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<br>
Description = Similar to 1-aminocyclopropane-1-carboxylic acid oxidase|
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==Annotated Information==
Version = NM_001061192.1 GI:115462114 GeneID:4337818|
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===Gene Symbol===
Length = 1589 bp|
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*'''Os04g0578000 <=> OsACS2'''
Definition = Oryza sativa Japonica Group Os05g0149400, complete gene.|
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<br>
Source = Oryza sativa Japonica Group
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===Function===
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*Cyanide, whose production is triggered by HR in infected tissue, contributes to the resistance in rice plants via restriction of fungal growth.
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<br>
  
  ORGANISM  Oryza sativa Japonica Group
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===Mutation===
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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*Pi-i-mediated resistance was compromised in transgenic rice lines, in which ethylene biosynthetic enzyme genes were silenced and then ethylene production was inhibited. The compromised resistance in transgenic lines was recovered by exogenously applying cyanide but not ethephon, an ethylene-releasing chemical in plant tissue.
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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<br>
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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==Labs working on this gene==
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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*Plant-Microbe Interactions Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki
AP = Chromosome 5:2803370..2804958|
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*Miyagi University, Sendai, Miyagi 982–0215, Japan (T.I.); and College of Agriculture, Ibaraki University, 3–21–1 Chuo, Ami, Ibaraki 300–0393, Japan (M.H.)
CDS = 2803492..2803599,2803875..2804693|
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<br>
GCID = <gbrowseImage1>
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==References==
name=NC_008398:2803370..2804958
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<references>
source=RiceChromosome05
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<ref name="ref1">
preset=GeneLocation
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Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus1
</gbrowseImage1>|
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</ref>
GSID = <gbrowseImage2>
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name=NC_008398:2803370..2804958
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</references>
source=RiceChromosome05
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<br>
preset=GeneLocation
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==Structured Information==
</gbrowseImage2>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
CDNA = <cdnaseq>atggttgttccggtgatcgacttctccaagctcgacggcaccgccgcagagagggctgagacgatggcgcagatcgacaatggctgcgaggagtggggattcttccagctggtgaaccatggcgtcccgaaggagcttcttgatcgggtgaagaaggtgtgcttggagagctaccgactccgggaggcggcgttcatggagtcggagccggtgaggacgctggaggggctcatggcggcggagcggcgcggcgaggcggcggcgccggtggacgacatggactgggaggacatcttctacctccacgacgacaaccagtggccgtcgaacccgccggagttcaaggagacgatgcgcgagtaccgcgcggcgctgcgggggctcgccgagagggtgatggaggccatggacgagaacctcggcctcgacaaggggcgcatgaggcgcgccttcaccggcgacggccgccacgcgccgttcttcggcaccaaggtcagccactacccgccgtgcccgcgccccgacctcatcaccggcctccgcgcccacaccgacgccggcggcgtcatcctgctgttccaggacgaccgcgtcggcggcctccaggtgctcaggggcggcgagtgggtcgacgtgcagccgctcgccgacgccatcgtcgtcaacaccggcgaccaggtggaggtgctcagcaacggccgctaccgcagcgcgtggcaccgcgtcctccccatgcgcgacggaaaccggcgctccgtcgcgtcgttctacaacccggcgttcgaggccaccatctcgccggcggtgggcgccggcggcgagtacccggagtacgtgttcggcgagtacatggatgtgtacgccaagcagaagttcgatgcgaaggagccacgcttcgaggccgtcaaggcgccaaaatctgcttaa</cdnaseq>|
 
AA = <aaseq>MVVPVIDFSKLDGTAAERAETMAQIDNGCEEWGFFQLVNHGVPK                    ELLDRVKKVCLESYRLREAAFMESEPVRTLEGLMAAERRGEAAAPVDDMDWEDIFYLH                    DDNQWPSNPPEFKETMREYRAALRGLAERVMEAMDENLGLDKGRMRRAFTGDGRHAPF                    FGTKVSHYPPCPRPDLITGLRAHTDAGGVILLFQDDRVGGLQVLRGGEWVDVQPLADA                    IVVNTGDQVEVLSNGRYRSAWHRVLPMRDGNRRSVASFYNPAFEATISPAVGAGGEYP                    EYVFGEYMDVYAKQKFDAKEPRFEAVKAPKSA</aaseq>|
 
DNA = <dnaseqindica>123..230#506..1324#atcaactgcaagcttacatcacactagctaattagctacttactcttcttcttgctagcttgctagcttctgcatttagacattgcaaaatctgaaaaaacttgagaaattaactaaacaaaatggttgttccggtgatcgacttctccaagctcgacggcaccgccgcagagagggctgagacgatggcgcagatcgacaatggctgcgaggagtggggattcttccaggtagctatacataatcagatcatgtgtcttcttagttgttgcagagatcgaaagttataaatcctcaattatatataagaatagttggtgcagtgatcgaaagttattctcgatgaatttaaacatatcaacatattgtgaccaaaattatccttacatttttaagaatagttaatcaaatgaacatgtgatgattggtgattagatgatcatgacagcatccatcatgttgattaatgattaagatggttaataatcacttgggatcattgcagctggtgaaccatggcgtcccgaaggagcttcttgatcgggtgaagaaggtgtgcttggagagctaccgactccgggaggcggcgttcatggagtcggagccggtgaggacgctggaggggctcatggcggcggagcggcgcggcgaggcggcggcgccggtggacgacatggactgggaggacatcttctacctccacgacgacaaccagtggccgtcgaacccgccggagttcaaggagacgatgcgcgagtaccgcgcggcgctgcgggggctcgccgagagggtgatggaggccatggacgagaacctcggcctcgacaaggggcgcatgaggcgcgccttcaccggcgacggccgccacgcgccgttcttcggcaccaaggtcagccactacccgccgtgcccgcgccccgacctcatcaccggcctccgcgcccacaccgacgccggcggcgtcatcctgctgttccaggacgaccgcgtcggcggcctccaggtgctcaggggcggcgagtgggtcgacgtgcagccgctcgccgacgccatcgtcgtcaacaccggcgaccaggtggaggtgctcagcaacggccgctaccgcagcgcgtggcaccgcgtcctccccatgcgcgacggaaaccggcgctccgtcgcgtcgttctacaacccggcgttcgaggccaccatctcgccggcggtgggcgccggcggcgagtacccggagtacgtgttcggcgagtacatggatgtgtacgccaagcagaagttcgatgcgaaggagccacgcttcgaggccgtcaaggcgccaaaatctgcttaaagttaaaaatagacttttatttgtgaattaattaattgattagttgcataaactatacataaccgcttttgctattcaagataaaaaaataggtgaccttacaaaatttaagtggttattattgtcatgagaatacaactattgttatgttacagtatatagtttggtattttagtgtgtcacggtttgtcagtaggaatatataataatgtaatagatcgtgttgttatatatacatgaataaactatatagatttttttaatt</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061192.1 RefSeq:Os05g0149400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 07:38, 7 November 2016

The rice Os04g0578000 was reported as OsACS2 in 2011 [1] by researchers from the Japan.

Annotated Information

Gene Symbol

  • Os04g0578000 <=> OsACS2


Function

  • Cyanide, whose production is triggered by HR in infected tissue, contributes to the resistance in rice plants via restriction of fungal growth.


Mutation

  • Pi-i-mediated resistance was compromised in transgenic rice lines, in which ethylene biosynthetic enzyme genes were silenced and then ethylene production was inhibited. The compromised resistance in transgenic lines was recovered by exogenously applying cyanide but not ethephon, an ethylene-releasing chemical in plant tissue.


Labs working on this gene

  • Plant-Microbe Interactions Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki
  • Miyagi University, Sendai, Miyagi 982–0215, Japan (T.I.); and College of Agriculture, Ibaraki University, 3–21–1 Chuo, Ami, Ibaraki 300–0393, Japan (M.H.)


References

  1. Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus1


Structured Information