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| − | {{JaponicaGene|
| + | The rice '''Os06g0604300''' was reported as '''OsPLDα5''' in 2011 <ref name="ref1" /> by researchers from the China. |
| − | GeneName = Os06g0604300|
| + | <br> |
| − | Description = Phospholipase D|
| + | ==Annotated Information== |
| − | Version = NM_001064551.1 GI:115468833 GeneID:4341468|
| + | ===Gene Symbol=== |
| − | Length = 2980 bp|
| + | *'''Os06g0604300 <=> OsPLDα5''' |
| − | Definition = Oryza sativa Japonica Group Os06g0604300, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *OsPLDa4 and OsPLDa5, both of which were up-regulated in response to feeding by the rice striped stem borer (SSB) Chilo suppressalis, mechanical wounding, and treatment with jasmonic acid (JA). |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ===Expression=== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *Antisense expression of OsPLDa4 and -a5 (as-pld), which resulted in a 50% reduction of the expression of the two genes, reduced elicited levels of linolenic acid, JA, green leaf volatiles, and ethylene and attenuated the SSB-induced expression of a mitogen-activated protein kinase (OsMPK3), a lipoxygenase (OsHI-LOX), a hydroperoxide lyase (OsHPL3), as well as a 1-aminocyclopropane-1-carboxylic acid synthase (OsACS2). |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | <br> |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ==Labs working on this gene== |
| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
| + | *National Key Laboratory of Rice Biology, Institute of Insect Science, Zhejiang University, Hangzhou 310029,China (J.Q., G.Z., L.Y., Y. Lu, J.C., Y. Lou); *Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, 07745 Jena, Germany (M.E.); |
| − | AP = Chromosome 6:24798943..24801922|
| + | *Tea Research Institute, Chinese Academy of Agricultural Science, Hangzhou 310008, China (X.S.). |
| − | CDS = 24799022..24799129,24799238..24801212,24801302..24801747|
| + | <br> |
| − | GCID = <gbrowseImage1>
| + | ==References== |
| − | name=NC_008399:24798943..24801922
| + | <references> |
| − | source=RiceChromosome06
| + | <ref name="ref1"> |
| − | preset=GeneLocation
| + | The Chloroplast-Localized Phospholipases D a4 and a5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice |
| − | </gbrowseImage1>| | + | </ref> |
| − | GSID = <gbrowseImage2>
| + | |
| − | name=NC_008399:24798943..24801922 | + | </references> |
| − | source=RiceChromosome06
| + | <br> |
| − | preset=GeneLocation
| + | ==Structured Information== |
| − | </gbrowseImage2>| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
| − | CDNA = <cdnaseq>atggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccaccaacctcaccaaccccacccgcctcaccggcaacgcccccgagggcttccgcaagtggtgggaagggctggagaacgggttggagaagacgaccgggcttggccccggcgggacgaggctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacgacgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccgagaacgtcgtcttctccgtcaaggtcgcgctgtccgtcgatgccaagctcatcggccgcgcctacctccccgtcagggacctcctgtccggcgaggccgtcgagcgcaagctcgacatcctcggcgacgacaagaagaagctcccccacggtccgaccatccacgtccggctgcagttcaaggacgtggccgccgacggcggcgggaagtggtggggcggcggcgtcggcgacgcggcgtaccccggcgtgccgtgcacctacttcaagcagcacgccgggtgcagggtcaccctgtaccaggacgcgcacgcgccggacacgttcgcgccgaggatcccgctcgccggcggcgcgcactaccagcaggggcggtgctgggaggacgtgttcgacgccatcagcaacgccaagcacctcatatacatcaccggctggtcggtgttcaccgacatcacgctcatccgcgacccgtcccggcagcgccccggcggcgacgccaccatcggcgagctcctcaagcgcaaggccagcgagggcgtccgcgtgctcatgctggtctggaacgacgtctcctccatccaggcgctccacgccatcggcatcaagctcagcgtcgcgcagacgcacgacgaggacacgctcgcctacttcgaggactccgacgtgcactgcgtcctctgcccgcggcaagccgacgccgccgccggcagcagcttcatcatgggcacgaaggtctcactcttggccacccaccaccagaagaccgtcatcgtcgaccacgacatgccggccggcaccggcggcggcggctccgacatccgctgcatcgtcagcttcgtcggcggcctcgacctctgcgacggccgctacgacacgcagtcccactccctcttccggacgctcgacgccgcgcaccacaaggacttccaccagccgagcatcgacgacgccgagctcgccaagggcgggccgagggagccatggcacgacatccactccaagctcgagggccccatcgcctgggacgtcctctacaacttcgagcagcggtggcggaagcagagcggccacgccgacctcctcgtcaacctcaccgccctcgagcacctcatcacgccgccgtccccggtgaagctccccggcaccaacaacgacgaccaccacgacgacgcatggaacgtgcagctcttccgctccatcgacggcggcgcgtgcgacggcttcccgagcagcccggaggcggcggcgcgcctcgacctcgtgagcgggaagaacaacgtgatcgagcggagcatccaggacgcgtacatccacgccatccgccgcgccagggacttcatctacatcgagaaccagtacttcatcgggagctcctacgggtggaggcccggcggcggcgtcaggccggaggacgtcgaggcggtgaacctgatcccgagggagctctccctcaagatcgtgagcaagatcgccgccggcgagcggttcgccgtctacgtcgtggtgccgatgtggcccgagggccaccctggcaacgaggccatgcaggccatcctcgactggcagaggaggacgatggagatgatgtactacgacatcgccgtcgcgctcaaggccaatcacagcgacgccgacccgagggattacctcaccttcttctgcttggggaacagggaggccaagagccatggcgagtacgtgcctgcacatcgcccggatcaagacacagactacgccaaggcgcagaacgcgcgccgcttcatgatctatgtccactccaagatgatgatagttgatgatgagtacatcatcgtcgggtcggccaacatcaaccagcggtcgatggacggcgggcgggactcggagatcgccatgggagcgttccagccacaccacctgaacgtcaatgggcaggctgcgagaggccagatccatggcttccggatgtcgctgtggtacgagcacctggggatgctgcacgacgacttcgtgcacccggggagcctggagtgtgtccggagagtgaacgcgatggccgacaggcactggcagctgtacgccggcgaggagctccacggcgacctccccggacacctgctcacctacccggtcgccgtcgagaaggacggcggcgccgtgacggcgctcccgggcgccgagttcttcccggacacggaggcgaaggtgatcgggacattggcgtcgtcggcgtacatgatcccctacctcacgtcgtag</cdnaseq>|
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| − | AA = <aaseq>MAHLLMHGTLDATIFEATNLTNPTRLTGNAPEGFRKWWEGLENG LEKTTGLGPGGTRLYATVDLGRARLGRTRVIDDEPVSPRWDERFHFYCAHFAENVVFS VKVALSVDAKLIGRAYLPVRDLLSGEAVERKLDILGDDKKKLPHGPTIHVRLQFKDVA ADGGGKWWGGGVGDAAYPGVPCTYFKQHAGCRVTLYQDAHAPDTFAPRIPLAGGAHYQ QGRCWEDVFDAISNAKHLIYITGWSVFTDITLIRDPSRQRPGGDATIGELLKRKASEG VRVLMLVWNDVSSIQALHAIGIKLSVAQTHDEDTLAYFEDSDVHCVLCPRQADAAAGS SFIMGTKVSLLATHHQKTVIVDHDMPAGTGGGGSDIRCIVSFVGGLDLCDGRYDTQSH SLFRTLDAAHHKDFHQPSIDDAELAKGGPREPWHDIHSKLEGPIAWDVLYNFEQRWRK QSGHADLLVNLTALEHLITPPSPVKLPGTNNDDHHDDAWNVQLFRSIDGGACDGFPSS PEAAARLDLVSGKNNVIERSIQDAYIHAIRRARDFIYIENQYFIGSSYGWRPGGGVRP EDVEAVNLIPRELSLKIVSKIAAGERFAVYVVVPMWPEGHPGNEAMQAILDWQRRTME MMYYDIAVALKANHSDADPRDYLTFFCLGNREAKSHGEYVPAHRPDQDTDYAKAQNAR RFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAFQPHHLNVNGQAARGQ IHGFRMSLWYEHLGMLHDDFVHPGSLECVRRVNAMADRHWQLYAGEELHGDLPGHLLT YPVAVEKDGGAVTALPGAEFFPDTEAKVIGTLASSAYMIPYLTS</aaseq>|
| |
| − | DNA = <dnaseqindica>80..187#296..2270#2360..2805#cacaccattgttttgcgagcttcttcccagccttgtcaagtgcacacagccacacactgaaactgaaggagcagcagcaatggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccaccaacctcaccaaccccacccgcctcaccggcaacgcccccgagggcttccgcaaggtcactcgtcgatgccatccatagcgatcatccacctcgccgacattttttccctgattcttgctgtgtttctgaatctttgtgcttggttggtgttggtgtttgcagtggtgggaagggctggagaacgggttggagaagacgaccgggcttggccccggcgggacgaggctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacgacgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccgagaacgtcgtcttctccgtcaaggtcgcgctgtccgtcgatgccaagctcatcggccgcgcctacctccccgtcagggacctcctgtccggcgaggccgtcgagcgcaagctcgacatcctcggcgacgacaagaagaagctcccccacggtccgaccatccacgtccggctgcagttcaaggacgtggccgccgacggcggcgggaagtggtggggcggcggcgtcggcgacgcggcgtaccccggcgtgccgtgcacctacttcaagcagcacgccgggtgcagggtcaccctgtaccaggacgcgcacgcgccggacacgttcgcgccgaggatcccgctcgccggcggcgcgcactaccagcaggggcggtgctgggaggacgtgttcgacgccatcagcaacgccaagcacctcatatacatcaccggctggtcggtgttcaccgacatcacgctcatccgcgacccgtcccggcagcgccccggcggcgacgccaccatcggcgagctcctcaagcgcaaggccagcgagggcgtccgcgtgctcatgctggtctggaacgacgtctcctccatccaggcgctccacgccatcggcatcaagctcagcgtcgcgcagacgcacgacgaggacacgctcgcctacttcgaggactccgacgtgcactgcgtcctctgcccgcggcaagccgacgccgccgccggcagcagcttcatcatgggcacgaaggtctcactcttggccacccaccaccagaagaccgtcatcgtcgaccacgacatgccggccggcaccggcggcggcggctccgacatccgctgcatcgtcagcttcgtcggcggcctcgacctctgcgacggccgctacgacacgcagtcccactccctcttccggacgctcgacgccgcgcaccacaaggacttccaccagccgagcatcgacgacgccgagctcgccaagggcgggccgagggagccatggcacgacatccactccaagctcgagggccccatcgcctgggacgtcctctacaacttcgagcagcggtggcggaagcagagcggccacgccgacctcctcgtcaacctcaccgccctcgagcacctcatcacgccgccgtccccggtgaagctccccggcaccaacaacgacgaccaccacgacgacgcatggaacgtgcagctcttccgctccatcgacggcggcgcgtgcgacggcttcccgagcagcccggaggcggcggcgcgcctcgacctcgtgagcgggaagaacaacgtgatcgagcggagcatccaggacgcgtacatccacgccatccgccgcgccagggacttcatctacatcgagaaccagtacttcatcgggagctcctacgggtggaggcccggcggcggcgtcaggccggaggacgtcgaggcggtgaacctgatcccgagggagctctccctcaagatcgtgagcaagatcgccgccggcgagcggttcgccgtctacgtcgtggtgccgatgtggcccgagggccaccctggcaacgaggccatgcaggccatcctcgactggcagaggaggacgatggagatgatgtactacgacatcgccgtcgcgctcaaggccaatcacagcgacgccgacccgagggattacctcaccttcttctgcttggggaacagggaggccaagagccatggcgagtacgtgcctgcacatcgcccggatcaagacacagactacgccaaggcgcagaacgcgcgccgcttcatgatctatgtccactccaagatgatgataggtaacaacaactactagttgcaaatttcaaccactacggttaaactcgctctaaatttcacaccgaattcaatgtttttcttttatcagttgatgatgagtacatcatcgtcgggtcggccaacatcaaccagcggtcgatggacggcgggcgggactcggagatcgccatgggagcgttccagccacaccacctgaacgtcaatgggcaggctgcgagaggccagatccatggcttccggatgtcgctgtggtacgagcacctggggatgctgcacgacgacttcgtgcacccggggagcctggagtgtgtccggagagtgaacgcgatggccgacaggcactggcagctgtacgccggcgaggagctccacggcgacctccccggacacctgctcacctacccggtcgccgtcgagaaggacggcggcgccgtgacggcgctcccgggcgccgagttcttcccggacacggaggcgaaggtgatcgggacattggcgtcgtcggcgtacatgatcccctacctcacgtcgtagagtgttgctctgagtgtgtgatcgagttgccattcctgcacactgctagagtgttgctctgctttgggtttgggcagagtttgttgtttcaagcaatgtaatctatctccggttgaattctacagctctatgtagtgttctgttctaatatgaattatgttcatcggcttatttc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064551.1 RefSeq:Os06g0604300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 6]]
| |
| − | [[Category:Chromosome 6]]
| |
