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| − | Please input one-sentence summary here.
| + | The rice '''Os07g0164100''' was reported as ''' HDA704''' in 2009 <ref name="ref1" /> by researchers from the China. |
| − | | + | <br> |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''Os07g0164100 <=> HDA704''' |
| | + | <br> |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | *The expression of rice HDAC genes is both tissue/organ-specific, and most of them are responsive to drought or salt stresses. |
| − | | + | <br> |
| − | ===Expression=== | + | ===Mutant=== |
| − | Please input expression information here.
| + | *Over-expression of several rice HDACs did not produce any visible phenotype, whereas down-regulation of a few HDAC genes affected different developmental aspects. |
| − | | + | *HDA704 RNAi altered plant height and flag leaf morphology. |
| − | ===Evolution===
| + | <br> |
| − | Please input evolution information here.
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| − | | |
| − | You can also add sub-section(s) at will.
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| | | | |
| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *National Key Laboratory for Crop Genetic Improvement, Huazhong Agricultural University, 430070 Wuhan, China |
| − | | + | *Institut de Biotechnologie des Plantes, Université Paris sud 11, 91405 Orsay, France |
| | + | <br> |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | <ref name="ref1"> |
| | + | Rice histone deacetylase genes display specific expression patterns and developmental functions |
| | + | </ref> |
| | | | |
| | + | </references> |
| | + | <br> |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] |
| − | GeneName = Os07g0164100|
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| − | Description = Histone deacetylase superfamily protein|
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| − | Version = NM_001065492.1 GI:115470716 GeneID:4342472|
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| − | Length = 8683 bp|
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| − | Definition = Oryza sativa Japonica Group Os07g0164100, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
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| − | AP = Chromosome 7:3468178..3476860|
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| − | CDS = 3468419..3468585,3469674..3469842,3470339..3470384,3470671..3470753,3471395..3471474<br>,3472320..3472428,3472667..3472735,3472874..3472924,3473059..3473184<br>,3473312..3473435,3473617..3473672,3473790..3473854,3474438..3474513<br>,3475050..3475108,3475275..3475365,3475490..3475990|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008400:3468178..3476860
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008400:3468178..3476860
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcgtctgatatgaggtcactcaacagccaaaagggacagagttgtggagtttcagaccaagcttgccacagcaaaagcaaaagcggcaatgatggaaaaccatcacatgctaaagcaaatggagtttcctcgttgagcgggagtcataatgatgagaaaattttgaaagagaactctggagcatgcaatttaaattccgaccatgccaatcctttatcagtagatgggaccaaagtttctacagcaaggtcggaacttattgacagttcaggccatgatggttgtctgcatgtcaagaatgaaagctgtatggcttgtgatgatctgcttcaagagtctgacaaagaacagcctgggggtacactggaggatctattttcctttaatgatgaagaggatgatgacagtgactgggaaccctctgctcgccttgctttgagcaggtggttttgcttgaactgtacagtgccaaacatggaggggtttacacattgtcagaattgcgatgagcttaagggatctgtggtagttggatatgatgctttcaaagctcatcttgcacaggcagctttgttatctgctgacgcagcgctgccatcagtatctacagctgtcggttttgatgaaagaatgttgctccatagtgagatagagattaaaccaaatccacatccagaaaggcctgaccgccttcgtgcaatcgctgccagtcttgctgctgcaggtatcttcccttcaaaatgtgtcatggtacctcctcgagaaatcactaaggaagaactcctaagggtccatacttcagatcacattgacagtgttgagcagacaaagaacatgctttacagttacttcacttcagatacctatgcaaatggacactcagcatgtgctgccaaacttgcagcagggatatgtgctgatcttgctaacttgatagtatctgggcgtgttcgcaatggatttgcaatggtgagacctcctggccatcatgcaggggtgaaacaagccatgggtttttgtcttcacaataatgcagcagtggctgcattagctgcacaaagagctggtgccaagaaagtcttaatagttgactgggatgtccaccatggcaatggaacacaggagatatttgatggggacaattctgtcttgtacatatcattacatcggcatgaggatggaagcttctaccctggaactggggcagcaaatgaggtgggagttatggatggccaaggattctcagtcaatataccttggagccgtggtggtgttggagacaatgactacatatttgcttttaagcatgtggtgcttccgatagctgcagaatttgctccagacatcaccatcatatctgcaggatttgatgcagcgaggggtgaccctctgggttgttgtgatgtcacacctgctggatattctaggatggcgtccatgctaactgcttgttcacagggaaaattgttggttatacttgagggaggatacaatcttcggtctatatcctcatcagctactgaagttgttaaggtcctacttggggatagtcctgtttatgatacagatgcaactgaaccatcagaggagggcatacagactgtcttacaagtcctgagtatccagcagcaattttggccagttttagttccatcctttgcatcagttctggcactgcagcggtcggttttttccagatataccactgaagtaaacaagatgaaaaggaagcatgcaggaggggcaggacccttctggtggaaatgggggagtaaaaggctactgtacgaagtgctatttgagggccgctgtctgaggaaaaccaaggatacaggcaaagaaaaattgaatgatgaagcagagccctaa</cdnaseq>|
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| − | AA = <aaseq>MASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVS SLSGSHNDEKILKENSGACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNE SCMACDDLLQESDKEQPGGTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNM EGFTHCQNCDELKGSVVVGYDAFKAHLAQAALLSADAALPSVSTAVGFDERMLLHSEI EIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQ TKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGV KQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRH EDGSFYPGTGAANEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDI TIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSAT EVVKVLLGDSPVYDTDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLALQRSVFS RYTTEVNKMKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKTKDTGKEKLNDEAEP</aaseq>|
| |
| − | DNA = <dnaseqindica>8276..8442#7019..7187#6477..6522#6108..6190#5387..5466#4433..4541#4126..4194#3937..3987#3677..3802#3426..3549#3189..3244#3007..3071#2348..2423#1753..1811#1496..1586#871..1371#gtggccgcgccgcgcccctccaaaaatccaatcgcgagaggcgagcgccgccgccgccgggatcgccctccaggtacggccgcctccgcccccgaggtcgccacggcgatttctcgtcggattcttcgattttcgcccgcggtttcaccgttccggggagagctagtcggggagtgtaggattttttttttctgagaaaaaggttttggatggtgggggttagggtttggttgaatcgtttgtatccgagttttgcgcggcccggatgttcaatccggtgatttcgtggtagctttgccgtccgggctgcgagggtagccgtagcgtgcggttgggttgtttctggtgttggggggatggggttgggagggtttgtgttctgaggaatctatgcgaggaagaagaaccaggtgaggtttgcggtgaggttttggtactgatattgcgctgcagaatcagtagatgcgatggaagagcgctgaggttttggaagggttttgagcagattatgcagtagtttcaggagatgcatttcgccgcatccccatttatagaaagtacctctgcgagcgttagtgctaggattgtcgatgcgcttcatgaggagatgttgaatttggcggctagctatgttgatgcattaactgctttcttatggttttgtgcgtaacggcaatttttttggataaggcgtgagtaggtttggcatgtagtaatcgattatcaataatgctactgagatttggcatgtgataatcagctattaataattcttagggctccctgtcggaagtccaaattcttatccactcttgtgtttcctatgctgatcttgtcgtatcacaattacagattgcgttgcatgctctgatggcgtctgatatgaggtcactcaacagccaaaagggacagagttgtggagtttcagaccaagcttgccacagcaaaagcaaaagcggcaatgatggaaaaccatcacatgctaaagcaaatggagtttcctcgttgagcgggagtcataatgatgagaaaattttgaaagagaactctggagcatgcaatttaaattccgaccatgccaatcctttatcagtagatgggaccaaagtttctacagcaaggtcggaacttattgacagttcaggccatgatggttgtctgcatgtcaagaatgaaagctgtatggcttgtgatgatctgcttcaagagtctgacaaagaacagcctgggggtacactggaggatctattttcctttaatgatgaagaggatgatgacagtgactgggaaccctctgctcgccttgctttgagcaggtggttttgcttgaactgtacagtgccaaacatggaggggtttacacattgtcaggtaaaggttattactttgtcagtgtaatcaggaatgccgtatgatttcttagaaattttagttcagatcatccagtgacattattttgattttggttttcttgatgtttattctcatactctagaattgcgatgagcttaagggatctgtggtagttggatatgatgctttcaaagctcatcttgcacaggcagctttgttatctgctgacgcaggtgcttctttacattctttactcagggtttaggttcttctttacacttgtagctatctttacacttgcagtttgaagcacagaatgtgtcccattacatcggttgttcatatgttatgtgtatccaacaacttcttaatttgtcacaatctcactattttatgcagcgctgccatcagtatctacagctgtcggttttgatgaaagaatgttgctccatagtgaggtaagcaatgaacttccgattatgttgtataaactagcaccatatgacatgtttggatctgacatcctacatcaaaattggccattgcttttctctctttctcccattgtttaatagcaaggattcgcataaatcttaattgctccttagtgtgctcagtgaaccttcttgtttgattgcttatgagttgtttcatctgagagatatttgttcaatcccattggagaacaaaacagaaacctgcaattgcaagctcatttacattgctaatttggaatcaaataaatattccttttctgtgctttcgtataacatgacaatattgaagtgtttcttgtttctgtatctgcttctaaacaatataatctaattatattctctttgaacatagattaaaataattctttctcaaaactagttgcatttaaccaaaaaaaattattttgaaagtacctttttttggcctcctaattttctctatcagcacagagccactgtaattctggactgacatctcacatttcctatgttatcagatagagattaaaccaaatccacatccagaaaggcctgaccgccttcgtgcaatcgctgccagtcttgctgctgcaggtactctatcattaactttgagatatcttttctatttagttattcagtgaaagcaactgtgataaaaaatacctctacaaacttttgtgattgtctgatcttgtttaaatatttaatctaggtctatgttttgatgattgcttactgttgcaaccgtgttgcccaatgtaacccaaaagtatatatggtagtggatagctaatctaaaaggtgtatctgatcttgttgaaagcaaagactgtctatgttttgatgattgcttactgttgcaaccgtgttgcccaatgtaacccaaaagtatatatggtagtggatagctaatctaaaaggtgtatctgatcttgttgaaagcaaagactttaatttgttacttcttgtgctctagcagatttatacaatgttttccaaaaacacatatggtagctaatcaagtaatcgacactgaaaatagttgatttgtgctgtagcaaatccacaaaactgtttccttgtcaaccatgttaattgaaatgggttgatgaaatagccttgctatgccactgcttatcaagttttactttaactcatatttccaatatctcaggtatcttcccttcaaaatgtgtcatggtacctcctcgagaaatcactaaggaagaactcctaagggtatgtaagagtttggcatgttaattatttttgctgccctatgttcccccagtatacttgtccttagtacaatcttttcgataatcctaacacattcaaaatcgtgcttacttctaggtccatacttcagatcacattgacagtgttgagcagacaaagaacatgctttacaggtactgtgtttattccatacttaaaagccatcttgtaattaccttgctttagttttgtactgtactgtttgttttagtataattaattgcatgctaatgacattatatttgctgcttgtgtgttctagtcttgctggaaagatttgcattgtcataacgtcattttgggatcgatttgtagttacttcacttcagatacctatgcaaatggacactcagcatgtgctgccaaacttgcagcagggatatgtgctgatcttgctaacttgatagtatctgggcgtgttcgcaatggatttgcaatggtactgtgcatatcatcttatatttgcaattctcgacctcttttttgcacagtacacctagacacctgagagttattattttgatatactttgcatgttgatactgactgtgtctaccggagagcaggtgagacctcctggccatcatgcaggggtgaaacaagccatgggtttttgtcttcacaataatgcagcagtggctgcattagctgcacaaagagctggtgccaagaaagtcttaatagttgactgggtaatgctagttacaagtttgcatttgaacttataccattgcattctgttggcatcatggacccccccaaaaaaagatagtgcctcaaatggatgttaatccatctcatcagtggtgctcaattgttgttgcaggatgtccaccatggcaatggaacacaggagatatttgatggggacaattctgtgagttatcatcttccttttgtgttgctaattgctttgcagtcctttactatacttccatatgcatggccaccaattgaccttctttccctgagtccttatttcttacatggataagttttcttcttcttctttcaggtcttgtacatatcattacatcggcatgaggatggaagcttctaccctggaactggggcagcaaatgaggtgattttctttaacatttgaagataatttatacaacactacatctgaactctgaactagtgaactacatcctatttgagccaactgatgctggctaaccgaatctggagtatttggggcatctcctttgacagattgcatgactctttttatcagagtttctgacctagcatgtggaaacttgagttctaagatgattcgttttatattgtaacttcttgcatgggcatcacttcaggtgggagttatggatggccaaggattctcagtcaatataccttggagccgtggtggtgttggagacaatgactacatatttgcttttaagcatgtggtgcttccgataggtaataattgaataggggcatttgcatatgtgctagtcaacttaaagttgctaataacaatattttctcaacgtaaacatggggaatatccagtgaaaaccatcaaataagtgaaaacccatgaaaaccatgcctaaaagttttgtaaattcatgaaaaaattactagagataggtataggcatgaaatacattcataccaaattttaagtccaaactcaacttcatttgagagaaacaaaaaagacaaatttcgggtgaatagtgttctgttactattcacctcaaatttgtctattttgtttctttcaaatgagttgagatttggtatgaatgtatttcatgtctatacctatctctagtatttttttcatgaatttacaaaacttttagatatggttttcacgagttttcacttatttgatggttttcaccggacatgtcccccggaacatacctatctttaatttgtaaagtcaagagcagctcacgcggactcctttgaattttttttgtgcttcgtcttctgtgagacttagcattttagaactttagatccttgttagaaagggcacagacaaaatatattgacacattggaacaaaaacctgtttatgccctgtttgggggagcttctagcagctgcagcttctcccagaagctccagctcccccaaacagggtgtctattcatttgggtaaaacatgtctgcctaaagtacttgggtcacaggcaccttgttatgtagattacattattaccttaataccttatattacccgcttgcgtttttgtatattgctattgcatgttctcgtttcaatgaattttctttcatgaatgcagctgcagaatttgctccagacatcaccatcatatctgcaggatttgatgcagcgaggggtgaccctctgggttgttgtgatgtaagttcgtaagactaacacatgattgttgtctctaaatcatgaacctgtttttttccacttccatttttgcatcattttagaaatctttgatgattctagatttctggtgtacgcttgtacctcctaactggcttcttagagatgaacgttcagactttgcagaggattttcttcttgtgaaacttaggctaacctttcatatgacatcatataggaaaattacatgttatttgggctcctttagaagctaattttaactgcacaactcatgtatggactttttcttggaccacattgaaacgccattcaagctcatacacagttgcttctttagggatgcactcattgagtcagtggtacactggtatggttgtgagatgcattgctgttctgtttggtttgtcatatgtgtttgtaaatactagagcttagtcaaatatgaagatgataactatgctgatgttctcacaagttagactgaactatatcatccatgcaaccctcaacttcgatactattcgtgtttgtttgctaatttattcttgtctgtgtgccttttttgtcctgtttgatatttcaatgcactccatgtcagtctgagtctgataattttgaccaacttcctctttaattaataggtcacacctgctggatattctaggatggcgtccatgctaactgcttgttcacagggaaaattgttggttatacttgagggagggtaggtacccagatgttctatcaatttaagataaatatatattcaaaaggtaggcaatgcctagaaatttgatccgcttgagatgatcacctgtaggctgtcatcttggacctaatatacacagcatcctgcttagagtttttggatttgtaggcactaaatcttaattttttatttttattttgatcagctaactaaattttgtgcaagtatatttagttgagatttgagaataccacatcaacacttatgcaatgttttttcgtcttgcctacctttggtgcagatacaatcttcggtctatatcctcatcagctactgaagttgttaaggtatgcattcttcacagtaacatctcattcttgttcaatggaatttataaataccataaggaggtaaggaactaagctatgtatgatcaactgcgttagcatcgtaactctccttggcagcaattgtcccaatatctctgaatgaaaattctgtttgtggcattagtcaaggattcaatttattttttgttgcctaactccctatggatatcaaaagctcaaggaacacatatgttgcaactggtttgattttctttcttttagtgctaggcagataaaattctaacatgatggatggcattctgcagttatataaccatttttattcaattaactgcattattgtatttgcagacaattcagcattttatgtatatgatataatgcagatatcgaaatacgggcagctgctttattcatttcagctgagagttgttatggttttaatgttgacatactgtcgttgacccatcttgatgatatttgacacttgcaggtcctacttggggatagtcctgtttatgatacagatgcaactgaaccatcagaggagggcatacagactgtcttacaagtcctgagtatccagcagcaattttggccagttttagttccatcctttgcatcagttctggcactgcagcggtcggttttttccagatatagtgagtgacaaaagtgcaatcaacattgccactaattaaactagatatattaagatattgatcagtagcttatttattgtggatacaaggattagaataatcagactcttgacttctgtgctagtttttggacactaatagccacatggtttggggggcaatggtgctaactttctgattcttcacataactagattatgggttagattttattactgagttaaggcttaaagatcatgcttgatcttttaactttagctctgaccattctaaatttatcttttccggtggagatgctattctcataatattgtttgagttccatgttaaacaaccgatgatttccatttcttcctgcagctggctatagttgtgaggtcccaaatctgccatattgttcccaacagtagcttgccagagacctatttatagtaaaggtgtagtctcactgagaccaaagaggttttgcgctgttccttttggtgagaattacttgagaatagattttcttttagactcaaaacaataaacggacgctaaagttcaccttcccttgcaaaggttctactgcgttctcttaggttggctttgcccaatttgcttcccacttccccactgctgaaaaagatagaagattgagtgatctcatgttagactagccatgttagctcttacgaatttcagttgtgctgatatttatagctgcgctgcagctctttatgctgatattgtaataagtaatacagtgagtgaatgatgtggttgggaggaatcaagggaaatttacagcatgcattaaaatacaacaccttctatactattttgggtacacgcgtagacaaccaaaggaaaagaacatgtatttctaattgttagtagacaatatttgatcttgttctttcttatgttgtgtcttgtttatctagataacttgatatttgatcttgttctgatttgtactgttagattagtttttctctcttatgtgcactagaaactatctgaggactactgttctgcttaccattgttttctgcagtaaagtgatttatatgttttttgatataatctctttttgcgatgtgtagccactgaagtaaacaagatgaaaaggaagcatgcaggaggggcaggacccttctggtggaaatgggggagtaaaaggctactgtacgaagtgctatttgagggccgctgtctgaggaaaaccaaggatacaggcaaagaaaaattgaatgatgaagcagagccctaaatgtgttgctgctgaagcctgactgctgatctcatcaacatccatagtgtagtgggctgactggggttccctgaatgtagcttgcatataccgagccaaattttgactggagaattaagatggtagttcgtgtttttaggtgaaatttgtgaacaaccttgttgacatgtattggatgttcagttgtattagaaatagagtcaagtttaccatcctgtcgtctgtcgaatgatcctgatgt</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001065492.1 RefSeq:Os07g0164100]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 7]]
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| − | [[Category:Chromosome 7]]
| |
