|
|
| (One intermediate revision by one other user not shown) |
| Line 1: |
Line 1: |
| − | Please input one-sentence summary here.
| + | The rice '''''Os03g0693600''''' was reported as '''''OsIAGLU''''' in 2012 <ref name="ref1" /> by researchers from Korea and USA. |
| | | | |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os03g0693600''''' '''''<=>''''' '''''OsIAGLU''''','''''IAGLU''''' |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * overexpression of the OsIAGLU gene may significantly reduce IAA levels in spikelets and exert an influence on the development of rice seeds. |
| − | | + | ===Phenotypic analysis=== |
| − | ===Expression=== | + | * The '''''OsIAGLU''''' gene driven by the Cauliflower Mosaic Virus 35S promoter was transformed into a rice cultivar to generate transgenic rice plants constitutively over-expressing this gene. The number of tillers and panicles significantly increased in the transgenic lines compared to the wild-type plants, while plant height and panicle length decreased. |
| − | Please input expression information here.
| + | * These results indicate that decreased levels of free IAA likely enhance tiller formation in rice. To increase levels of free IAA, we treated rice plants with three different concentrations of exogenous IAA (1 μM, 10 μM and 100 μM) twice a week by spraying. |
| − | | + | * Exogenous IAA treatment at concentrations of 10 μM and 100 μM significantly reduced tiller number in three different rice cultivars |
| − | ===Evolution===
| |
| − | Please input evolution information here.
| |
| | | | |
| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
| | | | |
| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * Department of Plant Science, Research Institute for Agriculture and Life Sciences, and Plant Genomics and Breeding Institute, Seoul National University, Seoul 151- 921, Korea |
| | + | * Soybean Genomics and Improvement Laboratory, USDA, ARS, Beltsville, Maryland 20705, USA |
| | + | * Department of Horticultural Biotechnology and Institute of Life Sciences & Resources, Kyung Hee University, Yong-In 446-701, Korea |
| | | | |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Choi M S, Koh E B, Woo M O, et al. Tiller Formation in Rice is Altered by Overexpression of OsIAGLU Gene Encoding an IAA-conjugating Enzyme or Exogenous Treatment of Free IAA[J]. Journal of Plant Biology, 2012, 55(6):429-435. |
| | + | </ref> |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0693600|
| |
| − | Description = Similar to Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D- glucosyl transferase)|
| |
| − | Version = NM_001057499.1 GI:115454726 GeneID:4333790|
| |
| − | Length = 3088 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0693600, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:28535769..28538856|
| |
| − | CDS = 28535769..28536446,28538020..28538856|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:28535769..28538856
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:28535769..28538856
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgcatgtccttgtcgtgccgtatcctagccaggggcacatgaacccgatggtgcagttcgcgaggaagctggcgtccaagggcgtggcggtgaccgtggtcaccacccgcttcatcgagcggacgacgtcgtcgtccgccggcggcgggggcctcgacgcctgcccgggggtgcgggtggaggtcatctccgacggccacgacgagggcggcgtcgcgtcggcggcgagcctggaggagtacctcgccacgctcgacgccgccggggccgcgtcgctcgccgggctcgtcgccgccgaggcgcgcggcgccggcgcggaccgcctccccttcacgtgcgtggtgtacgacacgttcgcgccgtgggcggggcgcgtggcgcgcggcctcggcctgccggccgtggcgttctccacgcagtcgtgcgccgtcagcgctgtgtaccactacgtccacgaggggaagctcgccgtgccggcgccggagcaggagccggcgaccagcaggagcgccgcgttcgccgggctgccggagatggagaggcgcgagctcccgtcgttcgtgctcggcgacgggccgtacccgacgctcgccgtgttcgcgctcagccagttcgccgacgcggggaaggacgactgggtgctcttcaactcgttcgacgagctggagagcgaggttttggctgggttgtcgacccagtggaaggcccgcgccatcgggccatgcgtgccacttcccgccggcgacggcgccaccggccgcttcacctacggcgcgaacctgctcgacccggaggacacctgcatgcagtggctggacaccaagccgccgagctccgtcgcctacgtctccttcggcagcttcgcgtccctcggcgccgcccagacggaggagctcgcccgcggcctcctcgccgccggcaggccgttcctgtgggtggtcagggccaccgaggaggcgcagctgccccgccacctcctggacgccgcgacggcgtcgggcgacgcgctcgtcgtgcggtggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgcggctggaactccaccctggaggcgctcggcttcggggtgcccatggtggcgatgccgctgtggaccgaccagcccaccaacgccctgctcgtcgagcgcgcctggggcgccggcgtgcgcgcccgccgcggcgacgccgacgccgacgacgccgcgggggggacggcggcgatgttcctccgcggcgacatcgagcggtgcgtgcgcgccgtcatggacggggaggagcaggaggccgcccgtgcccgcgcgcgcggcgaggcgcggcggtggagcgacgccgcgcgcgcggcggtgtcccccggcggcagctccgaccggagcctggacgagttcgtggagttcttgcgcggcggctccggcgccgacgccggcgagaagtggaagacgctggtttgggagggcagcgaggctgcagcgtcggagatgtga</cdnaseq>|
| |
| − | AA = <aaseq>MAHVLVVPYPSQGHMNPMVQFARKLASKGVAVTVVTTRFIERTT SSSAGGGGLDACPGVRVEVISDGHDEGGVASAASLEEYLATLDAAGAASLAGLVAAEA RGAGADRLPFTCVVYDTFAPWAGRVARGLGLPAVAFSTQSCAVSAVYHYVHEGKLAVP APEQEPATSRSAAFAGLPEMERRELPSFVLGDGPYPTLAVFALSQFADAGKDDWVLFN SFDELESEVLAGLSTQWKARAIGPCVPLPAGDGATGRFTYGANLLDPEDTCMQWLDTK PPSSVAYVSFGSFASLGAAQTEELARGLLAAGRPFLWVVRATEEAQLPRHLLDAATAS GDALVVRWSPQLDVLAHRATGCFVTHCGWNSTLEALGFGVPMVAMPLWTDQPTNALLV ERAWGAGVRARRGDADADDAAGGTAAMFLRGDIERCVRAVMDGEEQEAARARARGEAR RWSDAARAAVSPGGSSDRSLDEFVEFLRGGSGADAGEKWKTLVWEGSEAAASEM</aaseq>|
| |
| − | DNA = <dnaseqindica>1..678#2252..3088#atggcgcatgtccttgtcgtgccgtatcctagccaggggcacatgaacccgatggtgcagttcgcgaggaagctggcgtccaagggcgtggcggtgaccgtggtcaccacccgcttcatcgagcggacgacgtcgtcgtccgccggcggcgggggcctcgacgcctgcccgggggtgcgggtggaggtcatctccgacggccacgacgagggcggcgtcgcgtcggcggcgagcctggaggagtacctcgccacgctcgacgccgccggggccgcgtcgctcgccgggctcgtcgccgccgaggcgcgcggcgccggcgcggaccgcctccccttcacgtgcgtggtgtacgacacgttcgcgccgtgggcggggcgcgtggcgcgcggcctcggcctgccggccgtggcgttctccacgcagtcgtgcgccgtcagcgctgtgtaccactacgtccacgaggggaagctcgccgtgccggcgccggagcaggagccggcgaccagcaggagcgccgcgttcgccgggctgccggagatggagaggcgcgagctcccgtcgttcgtgctcggcgacgggccgtacccgacgctcgccgtgttcgcgctcagccagttcgccgacgcggggaaggacgactgggtgctcttcaactcgttcgacgagctggagagcgaggtaagtgaagaattaataaaccggagatttaatgtttttcaacgaatttttaaagcgtattactatttttcaactaaattttgtctcggtgattgattcgtagtagcatcatggcccatgcgtatagctttctttgatggccttcatatacgtataaactgttggcagttgggacaaagctgataaatcctttacatgcctgcttggaatgtgagaatgtcatatgattttggtagaaaaaaatgattggataaattattcgaaatcaatttactctcctttgtcgtacccaagtagatatgcagaattctagaattggatgggtgcaatgtagttcttatttatgcatgggtgtgggcgcggcgtcaggctaaaatatttgggtttttgattaatccctcttgttgatttgtactataaaaaatgatttaattaaatcattttagcctgtccatatgatacatttggaatgtgatgagaatggcccgacgctttctgtggtcgtcacggttgtcgtgaagacacgtgtcactaaagtcctatttgaaacactaaagtattaggaattttaatttggccgatcggttgtgctgctgccgctgcctctgtggcagttcatagctttgcgacaattgctatgaagacacgtgtcactaaagtcttatttgaaacatgaaagtatattaagaatttttttagccgcaatgtatttttcaaggatacgaaaacaatgtattctttaaggatgaaattttagaggatacagtatatatgcatatgtagcaagtgctcgatgctccggtgttagtctcctggtagtattatactagggggcaaattattaacttattaatacaatgattaggagttactttgttatttacgtttttcctggctaaatctatctatgatcatccattgtgttgacatcgctctcatttcatcgaaaaaaccaaaacaggaaggaaaaaaaatgtttagtcactgctaaatgatgattatatcatctgcatctattttttcttgacaataatgactgcgtacatttctattaccgttaactgcggtgatagtataaatagatctaaaccttttgatcaaatgaaatcaatggttcatattgatttatactacccgtagagagcaccgtagtaatggtcatgtagcaaatatagtgtgcattttcaaccttcacagtcaatttcctgccttatttctttttacgccaaacttggaacgataaaattattgaaatcctataaatgtcagaggaaggaaatatatagtgcaaacttagtatgtagtataaatctaaaaaataaagtataataaagaatagagtctttcttaaaaaaaataaagtctaatatttgtccaagttacacggagtaaaactttcgatttaacaatgagtaaaagttatttatagtgaggtaaacaaatctcagacacatattaaatgctactatgataattttcaggtttatattaggtatgtgatttgccagtggccgattgcacttgactccacaaaatggactaattgattaacactctgatcgtactgttctaggttttggctgggttgtcgacccagtggaaggcccgcgccatcgggccatgcgtgccacttcccgccggcgacggcgccaccggccgcttcacctacggcgcgaacctgctcgacccggaggacacctgcatgcagtggctggacaccaagccgccgagctccgtcgcctacgtctccttcggcagcttcgcgtccctcggcgccgcccagacggaggagctcgcccgcggcctcctcgccgccggcaggccgttcctgtgggtggtcagggccaccgaggaggcgcagctgccccgccacctcctggacgccgcgacggcgtcgggcgacgcgctcgtcgtgcggtggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgcggctggaactccaccctggaggcgctcggcttcggggtgcccatggtggcgatgccgctgtggaccgaccagcccaccaacgccctgctcgtcgagcgcgcctggggcgccggcgtgcgcgcccgccgcggcgacgccgacgccgacgacgccgcgggggggacggcggcgatgttcctccgcggcgacatcgagcggtgcgtgcgcgccgtcatggacggggaggagcaggaggccgcccgtgcccgcgcgcgcggcgaggcgcggcggtggagcgacgccgcgcgcgcggcggtgtcccccggcggcagctccgaccggagcctggacgagttcgtggagttcttgcgcggcggctccggcgccgacgccggcgagaagtggaagacgctggtttgggagggcagcgaggctgcagcgtcggagatgtga</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057499.1 RefSeq:Os03g0693600]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
| |
| − | [[Category:Japonica Chromosome 3]] | |
| − | [[Category:Chromosome 3]]
| |
