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| − | {{JaponicaGene|
| + | The rice '''Os03g0184000''' was reported as '''OsPDS''' in 2008 <ref name="ref1" /> by researchers from the China. |
| − | GeneName = Os03g0184000|
| + | <br> |
| − | Description = Similar to Phytoene desaturase (Fragment)|
| + | ==Annotated Information== |
| − | Version = NM_001055721.1 GI:115451170 GeneID:4331854|
| + | ===Gene Symbol=== |
| − | Length = 4650 bp|
| + | *'''Os03g0184000 <=> OsPDS''' |
| − | Definition = Oryza sativa Japonica Group Os03g0184000, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *Mutations in genes encoding major enzymes of the carotenoid biosynthesis pathway, including phytoene desaturase (OsPDS) |
| | + | <br> |
| | + | ==Labs working on this gene== |
| | + | *State Key Laboratory of Plant Genomics and National Centre for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences (CAS), Beijing 100101, China, |
| | + | *Graduate University of the CAS, Beijing 100039, China, |
| | + | *State Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences,Hangzhou 310006, China, |
| | + | *Centre for Biological Electron Microscopy, Institute of Biophysics, CAS, Beijing 100101, China, |
| | + | *State Key Laboratory of Photosynthesis and Environmental Molecular Physiology, Institute of Botany, CAS, Beijing 100093, China, |
| | + | *National Centre for Gene Research, CAS, Shanghai 200233, China, and |
| | + | *Laboratory of Molecular and Developmental Biology, Institute of Genetics and Developmental Biology, CAS, Beijing 100101,China. |
| | + | <br> |
| | + | ==References== |
| | + | <references> |
| | + | <ref name="ref1"> |
| | + | Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice |
| | + | </ref> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | </references> |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | <br> |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | ==Structured Information== |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:4388489..4393138|
| |
| − | CDS = 4388489..4388629,4388704..4388836,4388951..4389039,4389188..4389245,4389731..4389886<br>,4390105..4390253,4390757..4390876,4391062..4391275,4391362..4391464<br>,4391571..4391618,4391816..4391861,4392196..4392383,4392492..4392654<br>,4392776..4392841|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:4388489..4393138
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>| | |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:4388489..4393138
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>ggacaacttcctactcataggtgcttcgcaagtagcagcatccaagcactgaaaagtagtcagcatgtgagctttggagtgaaatctcttgtcttaaggaataaaggaaaaagattccgtcggaggctcggtgctctacaggttgtttgccaggactttccaagacctccactagaaaacacaataaactttttggaagctggacaactatcttcatttttcagaaacagtgaacaacccactaaaccattacaggtcgtgattgctggagcaggattagctggtttatcaacggcaaaatatctggcagatgctggtcataaacccatattgcttgaggcaagggatgttttgggtggaaagatagctgcttggaaggatgaagatggagattggtatgaaactgggcttcatatcttttttggagcttatcccaacatacagaacttgtttggcgagcttggtattaatgatcggttgcaatggaaggaacactccatgatatttgccatgccaaacaagccaggagaattcagccggtttgattttcctgaaacattgcctgcacccttaaatggaatatgggccatactaagaaacaatgaaatgctaacttggccagagaaggtgaagtttgctcttggacttttgccagcaatggttggtggccaagcttatgttgaagctcaagatggttttactgtttctgagtggatgaaaaagcagggtgttcctgatcgagtgaacgatgaggttttcattgcaatgtcaaaggcacttaatttcataaatcctgatgagttatccatgcagtgcattctgattgctttaaaccgatttcttcaggagaagcatggttctaagatggcattcttggatggtaatcctcctgaaaggttatgcatgcctattgttgaccatgttcgctctttgggtggtgaggttcggctgaattctcgtattcagaaaatagaacttaatcctgatggaacagtgaaacactttgcacttactgatggaactcaaataactggagatgcttatgtttttgcaacaccagttgatatcttgaagcttcttgtacctcaagagtggaaagaaatatcttatttcaagaagctggagaagttggtgggagttcctgttataaatgttcatatatggtttgatagaaaactgaagaacacatatgaccaccttcttttcagcaggagttcacttttaagtgtttatgcggacatgtcagtaacttgcaaggaatactatgatccaaaccgttcaatgctggagttggtctttgctcctgcagaggaatgggttggacggagtgacactgaaatcatcgaagcaactatgcaagagctagccaagctatttcctgatgaaattgctgctgatcagagtaaagcaaagattctgaagtatcatgttgtgaagacaccaagatctgtttacaagactatcccggactgtgaaccttgccgacctctgcaaagatcaccgattgaagggttctatctagctggtgactacacaaagcagaaatatttggcttcgatggagggtgcagttctatctgggaagctttgtgctcagtctgtagtggaggattataaaatgctatctcgtaggagcctgaaaagtctgcagtctgaagttcctgttgcctcctag</cdnaseq>|
| |
| − | AA = <aaseq>GQLPTHRCFASSSIQALKSSQHVSFGVKSLVLRNKGKRFRRRLG ALQVVCQDFPRPPLENTINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTAKYL ADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRL QWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLP AMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIA LNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKH FALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRK LKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEIIEA TMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLA GDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRRSLKSLQSEVPVAS</aaseq>|
| |
| − | DNA = <dnaseqindica>1..141#216..348#463..551#700..757#1243..1398#1617..1765#2269..2388#2574..2787#2874..2976#3083..3130#3328..3373#3708..3895#4004..4166#4288..4353#ggacaacttcctactcataggtgcttcgcaagtagcagcatccaagcactgaaaagtagtcagcatgtgagctttggagtgaaatctcttgtcttaaggaataaaggaaaaagattccgtcggaggctcggtgctctacaggttcaacctttgtactctattattgcctcacattccatctcttgtgaaaatatatttgattggcttttctgcaggttgtttgccaggactttccaagacctccactagaaaacacaataaactttttggaagctggacaactatcttcatttttcagaaacagtgaacaacccactaaaccattacaggtcgtgattgctggagcaggtatgatataattctaggatttgacagatgaataatttacatatatatctaactttgatagcagtcacatcgtggtcttagcattgtagtttttagctttgatttttttttcaggattagctggtttatcaacggcaaaatatctggcagatgctggtcataaacccatattgcttgaggcaagggatgttttgggtggaaaggttttactcttatgcttttatgttgcatttaattttttttgttattcattctttttttttttggttgcctttatcttaatagctcatattcactgttagtagcatttgtggattattgtttttttttttggggaaatgccttgaacagatagctgcttggaaggatgaagatggagattggtatgaaactgggcttcatatcttttgtaagtaataactctggatttttaaggttctcgttgtgctatattttatttaggttattaccgccagcactgatagatatctctaagggttttgaacaaaaaaacatgtatcaaactctttcatcgataaggtagaaatgccatgcgggaagtatgaagtgatgtctgaggattaacacacatggtagttttattttgtaagaaacttttagattggtttttttcacagtactaaaaagtaactttttactagcttatatggttgataaattttaacgtcacataaatatcatgagctaattgaatataaatcctcctgttcatacatagtcttctttcaacctactattcccttccaaacatatatgaatatgacagatactgtttttccttccatgctcacactgttttgtcgtccacaacagtacatatgtgacattgttcattttgtgcctgtatgtaaccatatacctttttggtttaagttggagcttatcccaacatacagaacttgtttggcgagcttggtattaatgatcggttgcaatggaaggaacactccatgatatttgccatgccaaacaagccaggagaattcagccggtttgattttcctgaaacattgcctgcacccttaaatggtgagatcatatgcagcgctggagttgtttaattaaaccaagattcccagaagtacatcgtattggtggttacttttgttttactaacacatgactgtaattagggggtatattactagcaacgttaatgatagatcaatagatcatgccatggagcttttatgttgtcaattgatgcctatttattatttatcattgatcatgcgtgcatttaacaggaatatgggccatactaagaaacaatgaaatgctaacttggccagagaaggtgaagtttgctcttggacttttgccagcaatggttggtggccaagcttatgttgaagctcaagatggttttactgtttctgagtggatgaaaaagcaggtataagttcacaatatcagtttgtcaagtctctgtgtacaagacacatttctacctcattaatttggaatggatataggagaaggtgttgtaagctagaaaaccttttattttctaataaaaaaactgatgccctttattgttgcattcacattgggaagaactggcagttctgaggatgaaatgcttcatgtactcaagtttatgccctttattttgcccagatccttttgcacaggtttaagcttgagctatgcttttagtttaagaccactgtttcagttaaaggtcaacaaccttgcatgatttcttcctccacctagaaaagccattgcacatattgacaaagcacacaatcctgttgactatattctttatgagctaatatacagaactgttttatacagaaaacacaatacatatgctatagttatcaatctctttccctttttttgggataacggattaatatggtgcctgatacagttgtttgatcagcacagggtgttcctgatcgagtgaacgatgaggttttcattgcaatgtcaaaggcacttaatttcataaatcctgatgagttatccatgcagtgcattctgattgctttaaaccgatttcttcaggtatttattatgttgctctatggtcatgtgtgttgcatatgagtaattcttctgttctttccggagtagtaccttacgtattacatccttcttagtgtttcttgtctctgttgtttcctaccttgaggaaactcaaatgaattttcgcttagaggccttttaaaaaaaattatgcaaatgtgtaggagaagcatggttctaagatggcattcttggatggtaatcctcctgaaaggttatgcatgcctattgttgaccatgttcgctctttgggtggtgaggttcggctgaattctcgtattcagaaaatagaacttaatcctgatggaacagtgaaacactttgcacttactgatggaactcaaataactggagatgcttatgtttttgcaacaccaggtgattttctacaatctttgtttcttctgcagttcataaattatatatatgcggctactcattttaactgactagcctgtatttagttgatatcttgaagcttcttgtacctcaagagtggaaagaaatatcttatttcaagaagctggagaagttggtgggagttcctgttataaatgttcatatatggttggttggttgaattatttggttccaagtcggaaattactcatcatcgagtttgtggttctccttatgactcatattagtatttctgttggtttgaacatttcaggtttgatagaaaactgaagaacacatatgaccaccttcttttcagcaggtgtctcttctaattcctcatcagttttgctgtcctttcactgcctcatgcatttgctctgtgctatgactggtttatgaactaaaacgatttgtattgcccaaattgggcacattctatcctgattttgtatacattcttgattaataccaaatatcatatgtcccatgtattgatcttgttcccttttctttcaggagttcacttttaagtgtttatgcggacatgtcagtaacttgcaaggtactaactaggagacattatatgttacgaaatagtaactatctgtcatgtattattgctcttgtgtatttgttcttgggtttaccatcttcaagcatcacatgatatttattttagtagctgtaacaaaaggcccaaaagtgcatgtgttacagaaggaatccagtattaattattaaacttggaaagtagatatattttatttcagattcatttaggcaacatgtcacttggctctagagtctagattttatggaccataatagctcaggaaattaaagacatggatgcctactgaacggttttctttccttttgttttgaactctttacaggaatactatgatccaaaccgttcaatgctggagttggtctttgctcctgcagaggaatgggttggacggagtgacactgaaatcatcgaagcaactatgcaagagctagccaagctatttcctgatgaaattgctgctgatcagagtaaagcaaagattctgaagtatcatgttgtgaagacaccaaggtgaggacattttgcaagagcgccccctatctgatatatcataggtaggtctaatagttggatgcacacttctctcacgttcctttcttttctgtctcactgttacagatctgtttacaagactatcccggactgtgaaccttgccgacctctgcaaagatcaccgattgaagggttctatctagctggtgactacacaaagcagaaatatttggcttcgatggagggtgcagttctatctgggaagctttgtgctcagtctgtagtggaggtaaacgctgctctccatggttctgtttgtacatagatgcatcagacttgtattgttgtcttggtgcagttcacaatgattcagttttgtaggctaatgagttatcacttgctgatttcaggattataaaatgctatctcgtaggagcctgaaaagtctgcagtctgaagttcctgttgcctcctagttgtagtcaggactattcccaatggtgtgtgtgtcatcatcccctagtcagtttttttctatttagtgggtgcccaactctccaccaatttacacatgatggaacttgaaagatgcctattttggtcttatcatatttctgtaaagttgatttgtgactgagagctgatgccgatatgccatgctggagaaaaagaacattatgtaaaacgacctgcatagtaattcttagacttttgcaaaaggcaaaaggggtaaagcgaccttttttttctatgtgaagggattaagagacctt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055721.1 RefSeq:Os03g0184000]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
