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| − | {{JaponicaGene|
| + | The rice '''Os01g0909200''' was reported as '''OsDCL''' in 2005 <ref name="ref1" /> by researchers from the USA. |
| − | GeneName = Os08g0508800|
| + | <br> |
| − | Description = Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
| + | ==Annotated Information== |
| − | Version = NM_001068734.1 GI:115477205 GeneID:4345993|
| + | ===Gene Symbol=== |
| − | Length = 7471 bp|
| + | *'''Os01g0909200 <=> OsDCL,DCL''' |
| − | Definition = Oryza sativa Japonica Group Os08g0508800, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''OsHI-LOX''', whose transcripts were up-regulated in response to feeding by the rice striped stem borer (SSB) Chilo suppressalis and the rice brown planthopper (BPH) Niaparvata lugens, as well as by mechanical wounding and treatment with JA. |
| | + | <br> |
| | + | ===Expression=== |
| | + | *Antisense expression of '''OsHI-LOX''' (as-lox) reduced SSB- or BPH-induced JA and trypsin protease inhibitor (TrypPI) levels, improved the larval performance of SBB as well as that of the rice leaf folder (LF) Cnaphalocrocis medinalis, and increased the damage caused by SSB and LF larvae. |
| | + | <br> |
| | + | ==Labs working on this gene== |
| | + | *Institute of Insect Sciences, Zhejiang University, Hangzhou 310029, China, |
| | + | *Laboratory of Fundamental and Applied Research in Chemical Ecology, Institute of Biology, University of Neucha ˆtel, Emile-Argand 11-CP2, CH-2007 Neucha ˆtel, Switzerland, |
| | + | *Institute of Biotechnology, Zhejiang University, Hangzhou 310029, China |
| | + | <br> |
| | + | ==References== |
| | + | <references> |
| | + | <ref name="ref1"> |
| | + | Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice |
| | + | </ref> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | </references> |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | <br> |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ==Structured Information== |
| − | |
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
| |
| − | AP = Chromosome 8:25304590..25312060|
| |
| − | CDS = 25304701..25306143,25306252..25306337,25306434..25306766,25306998..25307238,25310577..25310872<br>,25311567..25311942|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008401:25304590..25312060
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>| | |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008401:25304590..25312060
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgttgcgtcctcagctcaatccatctagccacacgacgacgacgagcagcagcagcagcacgcagctgttcgcatcctcgtcgtgcatcgctagccttcgccggccgtcgtcgtcgtcgtcgtcggtggtcgccgccgcacgccggacgcgggggcaaggtagcagtcgggttgttgttgtgtgcgcgtcgtcgtcggcgacggcgagcaggggagatagttcttcggacatggcggcggcggcggcggtgcgggtgaaggcggtggcgacgatcaaggtcaccgtcggcgagttgatcaacaggtcgatcgacatcagggatctcatcggcaggtcgctctccctcgagctcgtcagctccgagcttgacgcgaagaccgggaaggagaaagcaactgtgcggagctacgcgcacaatgtggacgacgacgatcatagcgtcgtcacctacgaggccgacttcgacgtgccgagtggattcggccccatcggcgccatcatcgtcaccaacgaactccggcaggagatgttcctcgaggacatcaacctcaccgccagcgatggcgccggcaactccactgtcctccccatccgctgcaactcctgggtccaacccaagtccgtcggcgatgagggcacgcctagcaaacgcatcttcttcgccaacaagacttacttgccgggacagacgccggcggggctccggagctaccggaagaatgacctccagcagaagcgcggtgacggcactggcgagagggaggccgacgaccgtgtctacgactacgacgtttacaacgacctcggtaacccggacagcaacggcgatctcgcccgccccgtccttggcggcaacaagcagttcccctaccctcgccgctgccgcaccggccgccccccctccaaaaaagaccctaagtcggagacgaggaagggcaacgtgtacgtgccgagggacgaggagttctcaccggagaaggaggactacttcctccgcaagacggtggggtcggtgctccaggccgccgtgccggcggcgcagtcgctgctcctcgacaagctgaaatggaaccttccgttcccgtccttcttcgtcatcgacaagctgttcgaggacggcgtcgagcttcccggcgtcgacaagctcaacttcctcgagagcgtcgtgccccgcctgctcgaacacctccgcgacacccccgccgagaagatcctccgcttcgaaactccggccaacatccaaaaggacaagttcgcatggctcagagacgaggagttcgcgagggaaacgctcgctggcatcaacccgtacgccatcgagctcgtcagggaatttccgctgaagagcaagctcgacccggcggtgtacggtccggcggagtcggcgatcaccgccgatttgctggaggagcagatgaggcgcgtgatgacggtggaggaggcgatcagccagaagaggctgttcatgctcgacttccatgacctcttcttgccgtacgtgcacaagatccggtcgctggatcacaccaccatgtacggctcgcgcaccgtcttcttcctcaccgacgacggcacgctgcagctgctcgccatcgagctcacccggccggcctcgccgtcgcagccgcagtggcggcaggtgttcacgccgtccacggacgccaccatgtcgtggctgtggcggatggccaaggcccacgtccgcgcccacgacgccggccaccacgagctcatcacccactggctgcgcacgcactgcgcggtggagccatacatcatcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcgcccgcacttccgctacacgatgcggatcaacgcgcgcgcccgctcggcgctgatcagcgccggcggcatcatcgagcgatccttctcgccgcagaagtactccatggagctcagctccgtcgcctacgacaagctctggcgcttcgacacggaggcgctccccgccgacctcgtccgccgcggcatggccgaggaggaccccacggcggagcacggcctcaagctcgccatcgaggactacccgttcgccaacgacggcctcctcatctgggacgccatcaagacctgggtccaggcgtacgtcgcgcggttctaccccgacgccgacagcgtcgccggcgacgaggagctccaggcgttctggaccgaggtgcgcaccaaggggcacggcgacaagaaggacgccccgtggtggccgaagttggactcgccggagagcctcgcccacacgctgaccaccatcgtctgggtggcggcggcgcaccacgccgccgtcaacttcgggcagtacgacttcggcggctacttccccaaccggccgtccatcgcgcgcacggtcatgccggtggaggagcccgtggacggcgccgccatggagaggttcctggacaacccggaccaggcgctccgcgagtgcttcccgtcacaggtgcaggcgacggtggtgatggcggtgctcgacgtgctgtccagccactccaccgacgaggagtacctcggcggcgagcagacgaggccgtggaacagcgacgcggcggtgcaggcggcgtacgacgggttcgcagcccggctcaaggagatcgagggcgtcatcgatggccggaacaaggatagaaagctcaagaacaggtgcggcgccggcatcctgccgtaccagctgatgaagcccttctccgactccggcgtcaccggcatgggcatccccaacagcacatccatctga</cdnaseq>|
| |
| − | AA = <aaseq>MLRPQLNPSSHTTTTSSSSSTQLFASSSCIASLRRPSSSSSSVV AAARRTRGQGSSRVVVVCASSSATASRGDSSSDMAAAAAVRVKAVATIKVTVGELINR SIDIRDLIGRSLSLELVSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSG FGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKR IFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNG DLARPVLGGNKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSPEKEDYFLRK TVGSVLQAAVPAAQSLLLDKLKWNLPFPSFFVIDKLFEDGVELPGVDKLNFLESVVPR LLEHLRDTPAEKILRFETPANIQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKS KLDPAVYGPAESAITADLLEEQMRRVMTVEEAISQKRLFMLDFHDLFLPYVHKIRSLD HTTMYGSRTVFFLTDDGTLQLLAIELTRPASPSQPQWRQVFTPSTDATMSWLWRMAKA HVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLRPHFRYTMRINARA RSALISAGGIIERSFSPQKYSMELSSVAYDKLWRFDTEALPADLVRRGMAEEDPTAEH GLKLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGH GDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVM PVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTR PWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVT GMGIPNSTSI</aaseq>|
| |
| − | DNA = <dnaseqindica>5918..7360#5724..5809#5295..5627#4823..5063#1189..1484#119..494#ccaaagccaacccaagccaagctcacgagtgcagagctagacgacgtgtagatacgtagtctcctccgatatctctctctctctcgatcgacgcctctgcatatataatacccataccatgttgcgtcctcagctcaatccatctagccacacgacgacgacgagcagcagcagcagcacgcagctgttcgcatcctcgtcgtgcatcgctagccttcgccggccgtcgtcgtcgtcgtcgtcggtggtcgccgccgcacgccggacgcgggggcaaggtagcagtcgggttgttgttgtgtgcgcgtcgtcgtcggcgacggcgagcaggggagatagttcttcggacatggcggcggcggcggcggtgcgggtgaaggcggtggcgacgatcaaggtcaccgtcggcgagttgatcaacaggtcgatcgacatcagggatctcatcggcaggtcgctctccctcgagctcgtcagctccgagcttgacgcgagtaagctaagctaattaattgttttttctgttaattaatgattagatggattgatgatgcatattcctgcatgcatgcaagcatcgtatgcatgcactgataatactctccctccgtcccataatataagagatttttaaagcgatatgacacaccctaaaataatgaatctgaacaagcctcatgggatggagggagtacttgatttgcatagtttttatgcatactttggttcttagatctcatgacctaagtagcggaaaactattctaaactctacagggacattctacatgctatctaaatggttatgaaaaattttaataagatatattaatatgtgataaatcactctataaacatgtgaggtcaaatttaacttctacaagttctaaaaagatagttgtgaatatatgttgactagtcatagtttaatttatttttattgcaacatttagaagttaaattttaacttagtatatttgtggagttatctatcatatattaatccatcttggttaattttttcatttttcaaataaccatttgaataacatgcaaataacaagaggatgtcccatcaagagattacaatccactcttctgaatagctatcaaataatagtgatccactatcctaaatgctctctattgagccttgcggattaattaatcaccacaattaattacgcagagaccgggaaggagaaagcaactgtgcggagctacgcgcacaatgtggacgacgacgatcatagcgtcgtcacctacgaggccgacttcgacgtgccgagtggattcggccccatcggcgccatcatcgtcaccaacgaactccggcaggagatgttcctcgaggacatcaacctcaccgccagcgatggcgccggcaactccactgtcctccccatccgctgcaactcctgggtccaacccaagtccgtcggcgatgagggcacgcctagcaaacgcatcttcttcgccaacaaggtacttcctccgttttatattataagtaattttaacttgttctagtcaaatttgtttaagtttggttaagtttataaaaaaaaatagtagctttttaacgcaataaacttataatcaaaatatatttaatattagatttaatgaaactaatttattattttaaatgtttttaatttgttccataaacctggtcaaactcaacaaagtgtaactaagaaaaaaaaaagttaaaactacttacaatatgaaacggagggaatacttcattaattaattaaaacacactattaaattattaatacatctaaatttatattaaaaaaggtgaaatatcatctcaaattttctcacaaaatctgaattggagagtaatatatatatatatatatatatatatgtatatatatatatatatatatatatgtatgtatgtatatatatgtatgtatgtgtatatatatatatatatatatatatatatatatatatatatataacaaaatctgaattggagagtaatatatatatatatatatatatatatatatatatgtatatatatatatatatatgtatgtatgtatatatatgtatgtatgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatataggatacccatatgggactctatggtgcccagattccaatgtataaaacacataaattctctcaaatttttaaaaatttacaaattgtaagtagatatctagctatatgaatttgattcatacaaatacctaacaacaaaacaactcaaactcaactttatttcacaattcattattacatacctaacgaattatatgtttggatgttatataactataaccaaaatctaacaaaaaaaaaattcaaactcagttcaaacttgtttgaacttgttcatatctaaacatttaaaaaaaattcatactcattcaaattgggtatatactcaatttgaatcttggagcccatactccatgtagcaccagttaatttacctatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatctactactacttaaaaaataagaggtgcttccatcgtccgtcaaaaaaaccgggtgaaaaaaaaccgggcgaaaaaaaccagtttgtccgatccaaaaaaaaccggtaaagaaatttccgtttttaattataaaaaaattacccacaaaaatagtttctgtccgattccaaataaaaaaaattccgagcgacaaaagagtttccatcttcctacaaaaggaaagaatagtgcgaaaaaaaaagtttctatccgaagggaaacacgcgtgaataaatacctaattaaaaataaatatctatctctaaaaaaccttctgtcgtaaaaaaaggaaaaaaaggaccgactcccgtagagaaaaaaaaagtccgactcgtgaaaaagaggttttctcgtccgtaataaaaaaaaagaaaaaaaacatctaactcaaactccgtaaaaagaaaaggaggaaaaaacgacccgaccaaacttaaagtcgccccttgttatccgtatatatctctttaactctaatctaatctatcaatctaatctaacaaagagaagtttccatcatccgttaaaaaggaaaaaaatgcgcaagaaaaaaataatttccaaaaaaatgcgcgggaaaaatacggtttccttcgtctgaaaaaaacaaaaaaaatgctattaaaaactatcagaaagaaatacaccatttctaaaaaaatggtttcaaaaaaccacacaagaaaaaaaaactgtttataaaaaaaagccgctctgaaaaaactaaccgatgaaacactgtttataaaataacagatccaaaaaaaacaaacggactcaacacgcgaaaaaaaccgatgtttcaaaataaggttcgagaaaaccgtccgacttaatgcgagaaaaaaaccatcatttcgaaaaaaaaattagaggaaaccatccaactcaatgcgagaaaaaaaccgccgtttataaaaagaaccgctccgagaaaccgtccgactcaaagcgagataaaattgatgggcgcttgggtcggataagatccatcgatatttttccatctcctacacatcatttcctacacatcatttgtttcctcatctaatccctgcactttttgtatgcaattatcattatcagactttttttaataacatattatataaaaatagtattaaaaataaacatatttttaattgttatttagagaagagtgcacggtgactattttgtgtagacttgatcctgagtgtaggatttgattaacctattattggttgcaagaataatattgaaagaatatttttttattatatgtatattgttatatgaataatccaattattttagttaaagcaagcattggtaaaaagattgccatcatcgagtttgggtcattacataaagatgctctaattttctaattgtgttagctacaacgatccatagaaacattatcattgatatgggtacgcttgaaaaatgtctattgtcattggattattttttttacccgttgcaacgcacggacatttttgctagtatatatatatatatatatatatatatatatatatatatatatattcattagttggagttagcgtggatgacgagcgaccgcgattgtgcgcttgctcttagtgcacttatatagtccctcggttgcttaaattcccccgaaattttcacaaattcacacgcagcataaaacgtcaattgtattgggcttacaaatcaaaaattgccaccgagttgggctggcccatgggccgtcccgtaaacaggtgggcccaacctagcaaaatcgttgccgggaccacctatacatttgtcgacaaattttctactaaaaatttaacagatgtaattatagtacaatcatagtgtaattacactgtaacttgtatgtaattacactgtaacttgcatgtaactacagtgtaacttgtatataagtttcacgtaattttgaatcgttagatctattacaagatttgttctggtgaggaagaaaaaaatcacagcacacacatatgtgaaaggatttattcccaggacctatattttactgaataacatgttgccgagaaattcttgaaagttacatacaaggtacattatagttacagtgtaattacatgtaagttacagtgtaattacactacgattgtactgtaattatatctgacaaatattagggggagaaatttgatgacaaatatctagcaaaatcgttgccattttgcagacttacttgccgggacagacgccggcggggctccggagctaccggaagaatgacctccagcagaagcgcggtgacggcactggcgagagggaggccgacgaccgtgtctacgactacgacgtttacaacgacctcggtaacccggacagcaacggcgatctcgcccgccccgtccttggcggcaacaagcagttcccctaccctcgccgctgccgcaccggccgccccccctccaaaaaaggttcgtgagagaaattttactgttcttgaaaaagtatctcaaggtacctaaatttcacagtaaaattttcgataactcagggtacttagtaactacatatatcaaattttacactaatgtggtacttctggtaccatcttctcaagaatggtaaaattacccgtataacggattacgtatagtcgttgtcgtctccggtggcgactgatcgagttttggacaatgttgcagaccctaagtcggagacgaggaagggcaacgtgtacgtgccgagggacgaggagttctcaccggagaaggaggactacttcctccgcaagacggtggggtcggtgctccaggccgccgtgccggcggcgcagtcgctgctcctcgacaagctgaaatggaaccttccgttcccgtccttcttcgtcatcgacaagctgttcgaggacggcgtcgagcttcccggcgtcgacaagctcaacttcctcgagagcgtcgtgccccgcctgctcgaacacctccgcgacacccccgccgagaagatcctccgcttcgaaactccggccaacatccaaagtaggcatcgaattaaaccgaacagcttcacctcgatcgccattgattctgcagcattccaagtgtctaatggtgtttgctgtgtcttaactgcagaggacaagttcgcatggctcagagacgaggagttcgcgagggaaacgctcgctggcatcaacccgtacgccatcgagctcgtcagggtgagtcttcatgtcaagaattcagatatttcgattcggattttagagaaagtttgtcaatgttgtgcaggttttgattttggtttgatttttgctctgtgagtgcaggaatttccgctgaagagcaagctcgacccggcggtgtacggtccggcggagtcggcgatcaccgccgatttgctggaggagcagatgaggcgcgtgatgacggtggaggaggcgatcagccagaagaggctgttcatgctcgacttccatgacctcttcttgccgtacgtgcacaagatccggtcgctggatcacaccaccatgtacggctcgcgcaccgtcttcttcctcaccgacgacggcacgctgcagctgctcgccatcgagctcacccggccggcctcgccgtcgcagccgcagtggcggcaggtgttcacgccgtccacggacgccaccatgtcgtggctgtggcggatggccaaggcccacgtccgcgcccacgacgccggccaccacgagctcatcacccactggctgcgcacgcactgcgcggtggagccatacatcatcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcgcccgcacttccgctacacgatgcggatcaacgcgcgcgcccgctcggcgctgatcagcgccggcggcatcatcgagcgatccttctcgccgcagaagtactccatggagctcagctccgtcgcctacgacaagctctggcgcttcgacacggaggcgctccccgccgacctcgtccgccgcggcatggccgaggaggaccccacggcggagcacggcctcaagctcgccatcgaggactacccgttcgccaacgacggcctcctcatctgggacgccatcaagacctgggtccaggcgtacgtcgcgcggttctaccccgacgccgacagcgtcgccggcgacgaggagctccaggcgttctggaccgaggtgcgcaccaaggggcacggcgacaagaaggacgccccgtggtggccgaagttggactcgccggagagcctcgcccacacgctgaccaccatcgtctgggtggcggcggcgcaccacgccgccgtcaacttcgggcagtacgacttcggcggctacttccccaaccggccgtccatcgcgcgcacggtcatgccggtggaggagcccgtggacggcgccgccatggagaggttcctggacaacccggaccaggcgctccgcgagtgcttcccgtcacaggtgcaggcgacggtggtgatggcggtgctcgacgtgctgtccagccactccaccgacgaggagtacctcggcggcgagcagacgaggccgtggaacagcgacgcggcggtgcaggcggcgtacgacgggttcgcagcccggctcaaggagatcgagggcgtcatcgatggccggaacaaggatagaaagctcaagaacaggtgcggcgccggcatcctgccgtaccagctgatgaagcccttctccgactccggcgtcaccggcatgggcatccccaacagcacatccatctgatgagacaaaacgctccaaaactacttgcaaattgatcattcatcatctactgttttaaccaatatgtcactcccaaatctttattgatttttatcatgtttgaaaagataa</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068734.1 RefSeq:Os08g0508800]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
| |
| − | [[Category:Chromosome 8]]
| |
