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| − | Please input one-sentence summary here.
| + | The rice '''Os03g0160100''' was reported as ''' OsEDR1''' in 2011 <ref name="ref1" /> by researchers from the China. |
| − | | + | <br> |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''Os03g0160100 <=> OsEDR1''' |
| | + | <br> |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | *'''OsEDR1'''-suppressing/knockout (KO) plants, which developed spontaneous lesions on the leaves, have enhanced resistance to Xanthomonas oryzae pv. oryzae (Xoo) causing bacterial blight disease. |
| − | | + | <br> |
| − | ===Expression=== | + | ===Mutant=== |
| − | Please input expression information here.
| + | *Knockout of '''OsEDR1''' suppressed the ACC synthase (ACS) gene family, which encodes the rate-limiting enzymes of ethylene biosynthesis by catalysing the formation of ACC. The lesion phenotype and enhanced bacterial resistance of the '''OsEDR1-KO''' plants was partly complemented by the treatment with ACC. ACC treatmen was associated with decreased SA and JA biosynthesis in '''OsEDR1-KO''' plants. |
| − | | + | <br> |
| − | ===Evolution===
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| − | Please input evolution information here.
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| − | | |
| − | You can also add sub-section(s) at will.
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| | | | |
| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *National Key Laboratory of Crop Genetic Improvement, National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, China |
| − | | + | <br> |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | <ref name="ref1"> |
| | + | OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesispce_221 |
| | + | </ref> |
| | | | |
| | + | </references> |
| | + | <br> |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0160100|
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| − | Description = Similar to EDR1 (Fragment)|
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| − | Version = NM_001055570.1 GI:115450868 GeneID:4331696|
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| − | Length = 6932 bp|
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| − | Definition = Oryza sativa Japonica Group Os03g0160100, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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| − | AP = Chromosome 3:3179681..3186612|
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| − | CDS = 3179841..3180284,3181096..3181518,3181984..3182084,3182727..3183988,3184174..3184214<br>,3184326..3184394,3184524..3184624,3184962..3185040,3185119..3185217<br>,3185306..3185374,3185467..3185516,3185760..3185936,3186045..3186183<br>|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008396:3179681..3186612
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| − | source=RiceChromosome03
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008396:3179681..3186612
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| − | source=RiceChromosome03
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgaagaatctgttcaagagtaagatcaagtggcagcaccggtcgaacgaccccgcgtcgtcgcaggggcaggggcaggggctgccgcagcagacgccgccgtcgccatcgccggcgagctccccgtcgggggggccgcctgcgctatccgtgtcgacggtatcgtcgtcgtccccttccgccgccgcgacgccgacgggggctgctgcggcgggggcgggaggtgggggtgggggaacgggtggggaggattacatgttgtcggaggaggagttccagatgcagctggcgatggcgctgtcggcgtccaacagcgagtgcgtgggcgacctggacggggagcagatcaggaaggccaagctgataagcctcggcaggggcgaccgcttcgccgccgtccgggacgacgagcaaaccgcggatgcgctctcccgccgctaccgggactacaactttcttgattaccatgagaaagttattgatggcttctatgacatttttggcccctctatggaatcatcaaagcaagggaagatgccatcactagcagatcttcaaacgggcataggcgacctgggttttgaagtcatcgtaatcaatcgtgccattgataccaccttacaggagatggaacaagttgcacaatgtatcctgcttgactttcctgttgcaaatattgcagccttagttcaaagaatagccgagcttgttacagatcacatgggtggacctgtgaaagatgcaaatgacatgctcactagatggctagagaaaagcactgagctaagaacctcactacacacaagtttgttgcctattggctgcatcaagataggtctgtctcgtcaccgtgccctacttttcaagattctcgctgatagtgttggcattccttgcaagcttgtcaaagggagtaattatactggtgatgatgatgatgctatcaacataataaagatgaatgaaagggagtttttggttgatctcatggctgctcccggtactcttattccatcagatgtcttaagttggaagggcaactcattaaattctaatgcaagactcacccagaatccattggctgggtcatcaagtacaactgattctaatctcagtgccaatgcattaccacccggacataaaggtggccaactgcctttatttagcagtggcgattggatatcggccagtcaatctggatatgaaaaagatggagccaccacatcttcacaggcctcttcaagtggcacaacatctgttgctgctggaagcgcttttgatagttcttggacattagtttctcatggacaatcagatgatccatcaacctctgctggtatgtcagcacagcagaaagttatacttccaggtggagaacatccatggaatgagaatataaatgcgcgaaatgagaatataaaacttgtttcagatttacaagggaattcagagtccatcaacttatttgccgaccttaatccttttgggggtagggagcccaaaaggacttcagtgccattaaatgggccagataatagaaataatgagttgcaaagacgcagagagaatgtagtccctagcacacgaagaccccagcagcgattagttatgaaaaactggtctccttacaatgatgtttccaacaacaagcagtacaattatgttgaggattcatttgcacgtagaaatattggtgataatgctgcatcatcatctcaggtgccacggccatctgcaaaaaatactaatcttaatgttgtagtgcgcactgatacaccatacatggcagctcataattatgataatagtatggctggttcctctgcaatgaagatgacttctacagctgggattgggaaggttcctgataaggttctgtacggtgatttggacaagggccttactaattctagactgggggatcaaccaccgatagaaagacataaatggggcaattctgtagaaggaaggattccaacaggcacagttcacaatcaagcaaaagaacacaaggagaacttcgatggaaagcaagacaataagaagttacatcctgatccaaagaaatccccacttgacagattcatggacacatcaatgccatcaaggaaccctgaatccgtttcaccatcctttgctaggtcacacaagctagacaccatgttcgacgatgtgtctgaatgtgaaattcattgggaagatcttgtgattggtgaaaggattggcttaggttcatatggagaggtgtaccgtgctgattggaatggaacagaagtagctgtcaagaaattcttggatcaagatttctatggtgatgctttggatgaattccggagtgaagtgcggattatgcgtcgactgcgtcatccaaatattgttctcttcatgggtgctgttactcgtcctccaaacttatctattgtatctgagtatcttccaaggggaagcttatataagatccttcaccgtcctaattgccaaattgacgagaagcgtagaattaaaatggcccttgatgtggccaaaggaatgaattgcctccatattagtgtaccaacaattgttcatcgggatcttaaatcaccaaacttgctggttgacaacaactggaatgtgaaggtttgtgattttggactttcacgcttgaagcacagtacattcttatcatccaaatccactgctggaactccggagtggatggcacctgaggtcttgcggaatgaacaatcaaatgaaaagtgtgatgtttacagctttggtgtcatcttgtgggaattagcaacacttaggatgccatggagtggaatgaatccaatgcaagttgttggggcagtcggcttccaggacaagcggctcgatattcccaaggaaattgatcctctagttgcaaggatcatatgggaatgctggcagaaggatccaaatttgcggccctcgtttgcacagttaaccagtgctttgaagactgtccaaaggctagtaaccccttctcaccaggagtcccagagccctcctgtgcctcaagaaatatgggtgaattcttccaccccttga</cdnaseq>|
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| − | AA = <aaseq>MKNLFKSKIKWQHRSNDPASSQGQGQGLPQQTPPSPSPASSPSG GPPALSVSTVSSSSPSAAATPTGAAAAGAGGGGGGTGGEDYMLSEEEFQMQLAMALSA SNSECVGDLDGEQIRKAKLISLGRGDRFAAVRDDEQTADALSRRYRDYNFLDYHEKVI DGFYDIFGPSMESSKQGKMPSLADLQTGIGDLGFEVIVINRAIDTTLQEMEQVAQCIL LDFPVANIAALVQRIAELVTDHMGGPVKDANDMLTRWLEKSTELRTSLHTSLLPIGCI KIGLSRHRALLFKILADSVGIPCKLVKGSNYTGDDDDAINIIKMNEREFLVDLMAAPG TLIPSDVLSWKGNSLNSNARLTQNPLAGSSSTTDSNLSANALPPGHKGGQLPLFSSGD WISASQSGYEKDGATTSSQASSSGTTSVAAGSAFDSSWTLVSHGQSDDPSTSAGMSAQ QKVILPGGEHPWNENINARNENIKLVSDLQGNSESINLFADLNPFGGREPKRTSVPLN GPDNRNNELQRRRENVVPSTRRPQQRLVMKNWSPYNDVSNNKQYNYVEDSFARRNIGD NAASSSQVPRPSAKNTNLNVVVRTDTPYMAAHNYDNSMAGSSAMKMTSTAGIGKVPDK VLYGDLDKGLTNSRLGDQPPIERHKWGNSVEGRIPTGTVHNQAKEHKENFDGKQDNKK LHPDPKKSPLDRFMDTSMPSRNPESVSPSFARSHKLDTMFDDVSECEIHWEDLVIGER IGLGSYGEVYRADWNGTEVAVKKFLDQDFYGDALDEFRSEVRIMRRLRHPNIVLFMGA VTRPPNLSIVSEYLPRGSLYKILHRPNCQIDEKRRIKMALDVAKGMNCLHISVPTIVH RDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSSKSTAGTPEWMAPEVLRNEQSNEKC DVYSFGVILWELATLRMPWSGMNPMQVVGAVGFQDKRLDIPKEIDPLVARIIWECWQK DPNLRPSFAQLTSALKTVQRLVTPSHQESQSPPVPQEIWVNSSTP</aaseq>|
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| − | DNA = <dnaseqindica>161..604#1416..1838#2304..2404#3047..4308#4494..4534#4646..4714#4844..4944#5282..5360#5439..5537#5626..5694#5787..5836#6080..6256#6365..6503#ccttcctcccacgcttcttcttcttcttcttcttccctttccccaacctcgccgtccttcgcttgctcacgcggccttctccgatcgcggcggcggcggcggaggaggaggagtacggggaggggcgtagcgaggatcgagcggagacgtggttgacgagatgaagaatctgttcaagagtaagatcaagtggcagcaccggtcgaacgaccccgcgtcgtcgcaggggcaggggcaggggctgccgcagcagacgccgccgtcgccatcgccggcgagctccccgtcgggggggccgcctgcgctatccgtgtcgacggtatcgtcgtcgtccccttccgccgccgcgacgccgacgggggctgctgcggcgggggcgggaggtgggggtgggggaacgggtggggaggattacatgttgtcggaggaggagttccagatgcagctggcgatggcgctgtcggcgtccaacagcgagtgcgtgggcgacctggacggggagcagatcaggaaggccaagctgataagcctcggcaggggcgaccgcttcgccgccgtccgggacgacgagcaaaccgcggatgcgctctcccgccgctaccgggtgagtcgccatgaccaaggattcgattcgagatggattatatatgctaaactatgcaaccgtgtgactagtgagattttagtttgcattgccatacaacagtagacttattgcgggggaaggattgttttacatgttatgattaccagttactactataatccatgctaccattgttctcgtcgaattcaaattcaaccaatggattggatagtagcttccgtggctatgtctagaccatgtaaatgtgaatcttcaccttggaatggaaaatcacacatagaatagggaagggctcctatctagcatctacatgtattcattcctgtggactggaattacctcctttggtctcttccaggttcccggtgatcaacccattaaaacaattgtattaataaaatacttctacaatatacgttgccatgtttttgctggtgcattgcgatagaatcctacagatcagagtcttgcattggatattgcccaggaataaaggactattgtttctgtggacggcggggaagtagatgatattacaaggcagcgagattttctagactggaggttcttttgcgggcaattgtagctttgtagcttgttggttacatcaatctatgtcttttacatgttgggttgattccattctgttacttagtgagtgatatttcatatttgtagatattttgcttggtagatcacttttttccttccatgatgtgtcaattaagctcaaacatggggatgataagtatatttgcttgctggattgtctgacattctatcactgtgcttctattctgactttcaggactacaactttcttgattaccatgagaaagttattgatggcttctatgacatttttggcccctctatggaatcatcaaagcaagggaagatgccatcactagcagatcttcaaacgggcataggcgacctgggttttgaagtcatcgtaatcaatcgtgccattgataccaccttacaggagatggaacaagttgcacaatgtatcctgcttgactttcctgttgcaaatattgcagccttagttcaaagaatagccgagcttgttacagatcacatgggtggacctgtgaaagatgcaaatgacatgctcactagatggctagagaaaagcactgagctaagaacctcactacacacaagtttgttgcctattggctgcatcaagataggtctgtctcgtcaccgtgccctacttttcaaggtcagttctctctcagaaaatcctcaatatattgaatgttatgaattgtctagggtaagggttcaaagactaggggatatggcactcgccttctaataacggtggcagggcttctccctgctgagctaaaagaggatttgaggcttagggctaactttagagattcattgattgattgataatagagtacgtgggggtccctttatagggaggacatactagacacataaggaactaaatctctagtattatataaaccaatccaatctctatctctaactttctaataaacttcatctctttcctaactagataatctcctatatttatatgatttattcctaatttatcatgcccaaactgctgcatgggcctatgctcatacattgaatgtaagcactagatttcttcatttgtccaacatatatagatgtccgcttatggctactgtatatcttcgtgcagattctcgctgatagtgttggcattccttgcaagcttgtcaaagggagtaattatactggtgatgatgatgatgctatcaacataataaagatgaatgaaaggtattgatgtatttgatcattgctgtttctctgggggaaaactatagtaaaaaaacccggaccggtgggtgacctggccgaccttctggttcaccggtctgaccggtggctcggatggttgaaccacggttcacatgtgtacatgtatattgttattccctcctactcacatatggtgcaatagcataagggttaggccatccttccgtgagcacactgcccagggttcgattcccaccaaatgcgccactccttgccaattttgcggaaaaaaaggggacagccacagcaagcattgatgaaatgggcctcaggcagcccatttatggcccatttgcaggttgacctgtccaaccagtatcggtttaatgtccggttcgcctaagaaccggccggttcagccggttcaaagcggtttgaatgcatgtccggtctttgaagcaaaccgaaccgtgctaaggtctggttcccatttttttccggtcgaaccgccggtccggtctggttttttctactatggggaaaacaatccaaatacattatttatttattcgtctgctacctttgtttcaaatatatttttaaataatttggtattgctgccttacattttctaagtgggtttatgtgctgtttttgcagggagtttttggttgatctcatggctgctcccggtactcttattccatcagatgtcttaagttggaagggcaactcattaaattctaatgcaagactcacccagaatccattggctgggtcatcaagtacaactgattctaatctcagtgccaatgcattaccacccggacataaaggtggccaactgcctttatttagcagtggcgattggatatcggccagtcaatctggatatgaaaaagatggagccaccacatcttcacaggcctcttcaagtggcacaacatctgttgctgctggaagcgcttttgatagttcttggacattagtttctcatggacaatcagatgatccatcaacctctgctggtatgtcagcacagcagaaagttatacttccaggtggagaacatccatggaatgagaatataaatgcgcgaaatgagaatataaaacttgtttcagatttacaagggaattcagagtccatcaacttatttgccgaccttaatccttttgggggtagggagcccaaaaggacttcagtgccattaaatgggccagataatagaaataatgagttgcaaagacgcagagagaatgtagtccctagcacacgaagaccccagcagcgattagttatgaaaaactggtctccttacaatgatgtttccaacaacaagcagtacaattatgttgaggattcatttgcacgtagaaatattggtgataatgctgcatcatcatctcaggtgccacggccatctgcaaaaaatactaatcttaatgttgtagtgcgcactgatacaccatacatggcagctcataattatgataatagtatggctggttcctctgcaatgaagatgacttctacagctgggattgggaaggttcctgataaggttctgtacggtgatttggacaagggccttactaattctagactgggggatcaaccaccgatagaaagacataaatggggcaattctgtagaaggaaggattccaacaggcacagttcacaatcaagcaaaagaacacaaggagaacttcgatggaaagcaagacaataagaagttacatcctgatccaaagaaatccccacttgacagattcatggacacatcaatgccatcaaggaaccctgaatccgtttcaccatcctttgctaggtcacacaagctagacaccatgttcgacgatgtgtctgaatgtgaaattcattgggaagatcttgtgattggtgaaaggattggcttaggtatttttcctcaactaagattttgacatgatccttgcttctctatacattaacaagttgaaccgacaaatctttaacaatttgtcaaactatattattatagctcagccatgtgtaaactcattgcactatctgatgccaatttgttgcacaaacttgaaccaacttcttcctcctcccaacaggttcatatggagaggtgtaccgtgctgattggaatggaacagtaagaaactgtttgcttttatttccatattgtgccatagaaacattcttcccagaggttaaattctttattgttttgcttctgtcaaaaaacatttttgtttatttgcaggaagtagctgtcaagaaattcttggatcaagatttctatggtgatgctttggatgaattccggagtgaagtaggtgaaactatatatattttatatatcttagagctttactggctatagcgtggattcatttatttgtcatttttaattgatttttgctgcaatgttttgatttgccatatactttctttttacaaggtgcggattatgcgtcgactgcgtcatccaaatattgttctcttcatgggtgctgttactcgtcctccaaacttatctattgtatctgagtatcttccaaggtataacaattttctactgttgtttgcttgtgaagatcttttggtgtttatgataaagtatcatggtgtagataaacatagaaaacattctatctggaaggaccacaaagaaaagctctctcaacaacttagctttagaatggaacataacactggaggttcaacatgctgtagttgaaatacctgtctttaatgatttacttgtgcatgggaggtggcatactggcatctatctatagtagttatattatagtgcaactcatgctctatagttattgtactggtcatgttcgacgaattgatggctcacccttgactactctcctgtccttggcaggggaagcttatataagatccttcaccgtcctaattgccaaattgacgagaagcgtagaattaaaatggcccttgatgtggtaagtattttctatattttcttggcatgtttgtttatttttgtatctgcttgagaaaatggttgctttctcttaaaggccaaaggaatgaattgcctccatattagtgtaccaacaattgttcatcgggatcttaaatcaccaaacttgctggttgacaacaactggaatgtgaaggtactgtgctctttttacctttacattcattcagtcataagtatttatgagcgtgctgatcgattggctcaccaatgatgtgaaataggtttgtgattttggactttcacgcttgaagcacagtacattcttatcatccaaatccactgctggaactgtaagtactaaaccggaccatagtaggatgagttctctccttctttgatcatcactaaacatttactatttctgttttcgatatctcaccagccggagtggatggcacctgaggtcttgcggaatgaacaatcaaatgaaaagtaagttattcctcgatggcttttgtttcaataactattagcttttgccctagcttgttcaatttattttttcattctgggcataccattcaaagttgttcagcattacagaagaaattatgtttatcttccagtctctactcgtagaaatggaacacccatctccctcacaaacctttcagctttccttgtttgattggtgtggcagtaatctcactcagacatcacctgaaatttctgcaggtgtgatgtttacagctttggtgtcatcttgtgggaattagcaacacttaggatgccatggagtggaatgaatccaatgcaagttgttggggcagtcggcttccaggacaagcggctcgatattcccaaggaaattgatcctctagttgcaaggatcatatgggaatgctggcagaagtgagtgtttagaaacaaacctattttatgttgcatcaataaagtactctcttccaactatcaattgtgttgctagatccgagctaatatttggtttttaaacctcagggatccaaatttgcggccctcgtttgcacagttaaccagtgctttgaagactgtccaaaggctagtaaccccttctcaccaggagtcccagagccctcctgtgcctcaagaaatatgggtgaattcttccaccccttgatgttgaggggcattccactctcaaaattgtgagtaattattgatgattgttgctgttaagtttgttcaagtctgcaaatgtgggcgcactgtagattctagcggccctaatggtagacatccctgctgccgcgacaaaagaacccagcagtagagtatgtatagagactatagtcatcgaccaaaacgatgacccgaagaagaaatccagtctgtggcatctcatttttcatgttcccagtttgcctttgtaaaaccttttggattcgagccctctggaaagcagtgagagctcgtggcgttggattaagaaggatctgtgtctgactgtgtttacaagtggattggataattgttgctgcagaacatgacatcttggaagttaaaaatgttgtaatatgcaatttttttaaacttgcaattcgaatgc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055570.1 RefSeq:Os03g0160100]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
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| − | [[Category:Chromosome 3]]
| |
