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| − | Please input one-sentence summary here.
| + | The rice '''Os03g0107300''' was reported as ''' lsi2''' in 2007 <ref name="ref1" /> by researchers from the Japan. |
| − | | + | <br> |
| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''Os03g0107300 <=> lsi2''' |
| | + | <br> |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | *This gene is constitutively expressed in the roots. The protein encoded by this gene is localized, like Lsi1, on the plasma membrane of cells in both the exodermis and the endodermis, but in contrast to Lsi1, which is localized on the distal side, '''Lsi2''' is localized on the proximal side of the same cells. |
| − | | + | <br> |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | *Expression of '''Lsi2''' in Xenopus oocytes did not result in influx transport activity for silicon, but preloading of the oocytes with silicon resulted in a release of silicon, indicating that '''Lsi2''' is a silicon efflux transporter. |
| − | | + | <br> |
| − | ===Evolution===
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| − | Please input evolution information here.
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| − | You can also add sub-section(s) at will.
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *Research Institute for Bioresources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan. |
| | + | *Institute of Society for Techno-innovation of Agriculture, Forestry and Fisheries, Kamiyokoba, Tsukuba, Ibaraki, 305-0854, Japan. |
| | + | *Biotechnology Research Center, The University of Tokyo, Bunkyo Ku, Tokyo, 113-8657, Japan. |
| | + | *Solution Oriented Research for Science and Technology, Japan Science and Technology Agency, 3-4-15 Nihonbashi, Tokyo 103-0027, Japan. |
| | + | *QTL Genomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan |
| | + | <br> |
| | + | ==References== |
| | + | <references> |
| | + | <ref name="ref1"> |
| | + | An efflux transporter of silicon in rice |
| | + | </ref> |
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| − | ==References==
| + | </references> |
| − | Please input cited references here.
| + | <br> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0107300|
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| − | Description = Citrate transporter family protein|
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| − | Version = NM_001055226.1 GI:115450180 GeneID:4331328|
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| − | Length = 2178 bp|
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| − | Definition = Oryza sativa Japonica Group Os03g0107300, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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| − | AP = Chromosome 3:409044..411221|
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| − | CDS = 409559..409827,409923..411072|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008396:409044..411221
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| − | source=RiceChromosome03
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008396:409044..411221
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| − | source=RiceChromosome03
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgagtgagcttgcgtcggcgcccaaggtggcgcttggatcgatcgcgttcgcggtgttctggatgatggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcggggtcgctgctgagcgcggtgctgatggtgatattccacgtgatcagccccgacgacgcgtacgcctccatcgacctcccaatcctgggcctcctcttcgccaccatggtggtgggcagctacctccggaacgccgggatgttcaagcacctggggcgtctgctggcgtggaagagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgccctcgccagcgccctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtcctcgagctcgccgccgagcgcaacctccccgccaagcccttcctcctcgccctcgcctccagcgccaacatcggctccgccgccacccccatcggcaacccccagaacctggtcatcgccttcaatagcaagatcaccttccccaagttcctcatgggaatcctcccggccatgctcgtcgggatggccgtcaacatggtcatgctgctctgcatgtactggagggagctgggcggaggggccgagctcagcgtcgacggcaagcagatggaggcggtggaggaaggcaggtcgccggcgtcggccaagagcacgccgcagctgaacggcaacggcaacacgatgatgtcgctggagatgtcggagaacataacgaccaagcacccatggttcatgcagtgcacggaggcgcggcggaagctgttcctcaagagcttcgcgtacgtggtgacggtggggatggtggtggcctacatggtggggctcaacatgtcgtggacggccatcaccacggcgctggcgctggtggtggtcgacttccgcgacgccgagccgtgcctggacaccgtgtcctactcgctgctcgtcttcttctccgggatgttcatcaccgtcagcggcttcaacaagacgggcctcccgggagccatctgggacttcatggccccctactccaaggtcaacagcgtcggcggcatctccgtcctctccgtcatcatcctcctcctctccaacctcgcatcaaacgtaccaacggtgcttcttatgggtgatgaggtggcgaaggcggcggcgctgatatcgccggcggcggtgacgacgtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatagtgtgcgagcaggcgaggagggcgcccaggaacgcctacgacctcaccttctggcagcacatcgtcttcggcgtcccatccaccctcatcgtcaccgccgtcggcatacccctcatcggcaagatctga</cdnaseq>|
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| − | AA = <aaseq>MSELASAPKVALGSIAFAVFWMMAVFPSVPFLPIGRTAGSLLSA VLMVIFHVISPDDAYASIDLPILGLLFATMVVGSYLRNAGMFKHLGRLLAWKSQGGRD LMCRVCVVTALASALFTNDTCCVVLTEFVLELAAERNLPAKPFLLALASSANIGSAAT PIGNPQNLVIAFNSKITFPKFLMGILPAMLVGMAVNMVMLLCMYWRELGGGAELSVDG KQMEAVEEGRSPASAKSTPQLNGNGNTMMSLEMSENITTKHPWFMQCTEARRKLFLKS FAYVVTVGMVVAYMVGLNMSWTAITTALALVVVDFRDAEPCLDTVSYSLLVFFSGMFI TVSGFNKTGLPGAIWDFMAPYSKVNSVGGISVLSVIILLLSNLASNVPTVLLMGDEVA KAAALISPAAVTTSWLLLAWVSTVAGNLSLLGSAANLIVCEQARRAPRNAYDLTFWQH IVFGVPSTLIVTAVGIPLIGKI</aaseq>|
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| − | DNA = <dnaseqindica>1395..1663#150..1299#tcagcagcgcatgcactagcagcttagctactgcgcgcgtaccagagagagatcatcagctcaagtagctaagctagctataatctgctagctagctcgatcagacacttaattacctgctaggtggtggtcgatcgaagaagaagaagatgagtgagcttgcgtcggcgcccaaggtggcgcttggatcgatcgcgttcgcggtgttctggatgatggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcggggtcgctgctgagcgcggtgctgatggtgatattccacgtgatcagccccgacgacgcgtacgcctccatcgacctcccaatcctgggcctcctcttcgccaccatggtggtgggcagctacctccggaacgccgggatgttcaagcacctggggcgtctgctggcgtggaagagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgccctcgccagcgccctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtcctcgagctcgccgccgagcgcaacctccccgccaagcccttcctcctcgccctcgcctccagcgccaacatcggctccgccgccacccccatcggcaacccccagaacctggtcatcgccttcaatagcaagatcaccttccccaagttcctcatgggaatcctcccggccatgctcgtcgggatggccgtcaacatggtcatgctgctctgcatgtactggagggagctgggcggaggggccgagctcagcgtcgacggcaagcagatggaggcggtggaggaaggcaggtcgccggcgtcggccaagagcacgccgcagctgaacggcaacggcaacacgatgatgtcgctggagatgtcggagaacataacgaccaagcacccatggttcatgcagtgcacggaggcgcggcggaagctgttcctcaagagcttcgcgtacgtggtgacggtggggatggtggtggcctacatggtggggctcaacatgtcgtggacggccatcaccacggcgctggcgctggtggtggtcgacttccgcgacgccgagccgtgcctggacaccgtgtcctactcgctgctcgtcttcttctccgggatgttcatcaccgtcagcggcttcaacaagacgggcctcccgggagccatctgggacttcatggccccctactccaaggtcaacagcgtcggcggcatctccgtcctctccgtcatcatcctcctcctctccaacctcgcatcaaacgtaccaacgggtaattatacattctattaatccagaattaatgtatactactccatataagtataactaattaacatacaaaaatatatatgcgcatgcatgcagtgcttcttatgggtgatgaggtggcgaaggcggcggcgctgatatcgccggcggcggtgacgacgtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatagtgtgcgagcaggcgaggagggcgcccaggaacgcctacgacctcaccttctggcagcacatcgtcttcggcgtcccatccaccctcatcgtcaccgccgtcggcatacccctcatcggcaagatctgatctcatctcatcgacccatccaaattaattaattatgagatcgacaaacatccaagcttgctaggctcgtcgtcgtcgtcgtcgaccaccgtaccatatatatgcatgcatgccacgcacgtatatatatgctcctcaacctcaagtcaattaattaagagaatggatgaatgaatcaatgttgtgtatgatttcctttttgtttttgttttacccaccgtatatgtgctgtgtggtgtatggccggcgagcttgaaattgaattggccttgcttgcatgcatgcatggtgatcagatcagctcagctagctagctaaatcttgcttaattttatcaagtgtcaatcatgatgagaagagagggaactagatggagctagctagctagcaacacatgcagtgtgtgctaagcagtgcactctgcatgcttaaatttgcttgcttaattcaacatcgtattacatgtatgttgatatgtgcatgttcctcaaaatacatggaaaaaaaatgtttct</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055226.1 RefSeq:Os03g0107300]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
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| − | [[Category:Chromosome 3]]
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