Difference between revisions of "Os09g0451000"

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Please input one-sentence summary here.
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The rice gene Os09g0451000 was reported as '''''aco1''''' in 2010<ref name="ref1" /> by researchers from Japan.
  
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''''Os09g0451000 <=> OsACO1, ACO
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===Function===
 
===Function===
Please input function information here.
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* '''''ACO1''''' has a little effect on internode elongation at the heading stage, and that up-regulation of the ACS1 and OsEIN2 expression may attenuate inhibition of internode elongation.
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===Mutation===
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[[File:Os09g0451000-1.png|right|thumb|400px|'''Figure 6. Changes in internode length in ACO1 mutants.''' '' <ref name="ref1" />.'']]
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* The total length of the elongated internodes of aco1 mutants was slightly shorter than that of wild-type plants and that of ACO1-OX mutants was longer. Interestingly, expression of the ACC synthase gene ACS1 and ethylene signalling gene OsEIN2 was up-regulated in the aco1 mutants.
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===Expression ===
  
===Expression===
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* The tissue-specific accumulation of the '''''ACO1''''' transcript was examined in mature plants at the heading stage. There was a significant accumulation of the transcript in the lower parts of elongating internodes.
Please input expression information here.
 
  
 
===Evolution===
 
===Evolution===
Please input evolution information here.
 
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
 
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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*Photobiology and Photosynthesis Research Unit, Division of Plant Sciences
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*Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
  
 
==References==
 
==References==
Please input cited references here.
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<references>
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* <ref name="ref1">
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Iwamoto M, Baba-Kasai A, Kiyota S, Hara N, Takano M. ACO1, a gene for
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aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the
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heading stage in rice. Plant Cell Environ. 2010 May;33(5):805-15. doi:
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10.1111/j.1365-3040.2009.02106.x. PubMed PMID: 20040065.
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</ref>
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</references>
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==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]
GeneName = Os09g0451000|
 
Description = Similar to 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE)|
 
Version = NM_001069864.1 GI:115479470 GeneID:4347224|
 
Length = 1551 bp|
 
Definition = Oryza sativa Japonica Group Os09g0451000, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
 
AP = Chromosome 9:17539755..17541305|
 
CDS = 17540151..17541005,17541144..17541257|
 
GCID = <gbrowseImage1>
 
name=NC_008402:17539755..17541305
 
source=RiceChromosome09
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008402:17539755..17541305
 
source=RiceChromosome09
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcggcagcattgtcgttcccgatcatcgacatgagtctgctcgacggggcagagaggcccgcggcgatggggctgctccgcgacgcatgcgagagctggggcttctttgagatcctgaaccacggcatctcgacggagctgatggacgaggtggagaagatgaccaaggaccactacaagcgtgtgcgcgagcagaggttcctcgagttcgcgagcaagacgctcaaggaaggctgcgacgacgtgaataaggcggagaagctggactgggagagcaccttcttcgtccgccacctcccggagtccaacatcgccgacatacccgacctcgacgacgactacaggcgcctcatgaagcgcttcgcggcggagctggagacgctggcggagcggctactggacctgctctgcgagaacctcggcctcgagaagggctacctcaccaaggccttccgtggccccgcgggcgcacccaccttcggcaccaaggtcagcagctacccgccgtgcccgcgccccgacctcgtcaagggcctccgcgcccacaccgacgccggcggcatcatcctgctcttccaggacgaccgcgtcggtggcctccagctgctcaaggacggcgagtgggtggacgtgccgcccatgcgccactccatcgtcgtcaacctcggcgaccagctggaggtgatcaccaacggcaggtacaagagcgtgatgcaccgggtggtggcgcagatcgacggcaacaggatgtccatcgcgtccttctacaaccctggcagcgacgccgtcatctccccggcgccggcgctggtgaaggaggaggaggccggcgagacgtatcccaagttcgtgttcgaggactacatgaagctgtacgtgcgccacaagttcgaggccaaggagccccggttcgaggcgttcaaggccatggagaacgagacccccaaccgcattgccatcgcttga</cdnaseq>|
 
AA = <aaseq>MAAALSFPIIDMSLLDGAERPAAMGLLRDACESWGFFEILNHGI                    STELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPE                    SNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPT                    FGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHS                    IVVNLGDQLEVITNGRYKSVMHRVVAQIDGNRMSIASFYNPGSDAVISPAPALVKEEE                    AGETYPKFVFEDYMKLYVRHKFEAKEPRFEAFKAMENETPNRIAIA</aaseq>|
 
DNA = <dnaseqindica>301..1155#49..162#aatacacaacccagctggtgaaagagaggaacttgagagttagctagcatggcggcagcattgtcgttcccgatcatcgacatgagtctgctcgacggggcagagaggcccgcggcgatggggctgctccgcgacgcatgcgagagctggggcttctttgaggtagaaaactgtgcgattgaatactaaacacatgtagaaatagaaatcaagatgcatgtagaattcagtttcttctaaaccaactagatgcatgttctcttgtttgatctgttggtgcggtgcgtatatatcgtgcagatcctgaaccacggcatctcgacggagctgatggacgaggtggagaagatgaccaaggaccactacaagcgtgtgcgcgagcagaggttcctcgagttcgcgagcaagacgctcaaggaaggctgcgacgacgtgaataaggcggagaagctggactgggagagcaccttcttcgtccgccacctcccggagtccaacatcgccgacatacccgacctcgacgacgactacaggcgcctcatgaagcgcttcgcggcggagctggagacgctggcggagcggctactggacctgctctgcgagaacctcggcctcgagaagggctacctcaccaaggccttccgtggccccgcgggcgcacccaccttcggcaccaaggtcagcagctacccgccgtgcccgcgccccgacctcgtcaagggcctccgcgcccacaccgacgccggcggcatcatcctgctcttccaggacgaccgcgtcggtggcctccagctgctcaaggacggcgagtgggtggacgtgccgcccatgcgccactccatcgtcgtcaacctcggcgaccagctggaggtgatcaccaacggcaggtacaagagcgtgatgcaccgggtggtggcgcagatcgacggcaacaggatgtccatcgcgtccttctacaaccctggcagcgacgccgtcatctccccggcgccggcgctggtgaaggaggaggaggccggcgagacgtatcccaagttcgtgttcgaggactacatgaagctgtacgtgcgccacaagttcgaggccaaggagccccggttcgaggcgttcaaggccatggagaacgagacccccaaccgcattgccatcgcttgatagcgtgtgtaccacagcgacccctaccgggtcggtgtcagtaaggtttagtcgtgttcgtagtgatcagtgcgtgcatggtcagctactcagctcgcgttttctacctgaataaattaagctccgtcgtcgtcgtctcgtcaccttggataattgtcagttggtgtggcgtgctgttgcacgtacggccatgtatctttgtcggctgtcctcgtgtggtacttgatagcttgtgcggcgtgctgtaccgtgtacggtttattatctactccagttctatatcgtggtgatttctgataattttcgtttttgtgttacatagcaaaagtgcccgtgcgttgcaacgggaagtgtatagaccagaaaatatgcaattatttaaaatataaatttgct</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069864.1 RefSeq:Os09g0451000]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 9]]
 
[[Category:Chromosome 9]]
 

Latest revision as of 06:53, 20 November 2016

The rice gene Os09g0451000 was reported as aco1 in 2010[1] by researchers from Japan.

Annotated Information

Gene Symbol

  • Os09g0451000 <=> OsACO1, ACO

Function

  • ACO1 has a little effect on internode elongation at the heading stage, and that up-regulation of the ACS1 and OsEIN2 expression may attenuate inhibition of internode elongation.

Mutation

Figure 6. Changes in internode length in ACO1 mutants. [1].
  • The total length of the elongated internodes of aco1 mutants was slightly shorter than that of wild-type plants and that of ACO1-OX mutants was longer. Interestingly, expression of the ACC synthase gene ACS1 and ethylene signalling gene OsEIN2 was up-regulated in the aco1 mutants.

Expression

  • The tissue-specific accumulation of the ACO1 transcript was examined in mature plants at the heading stage. There was a significant accumulation of the transcript in the lower parts of elongating internodes.

Evolution

You can also add sub-section(s) at will.

Labs working on this gene

  • Photobiology and Photosynthesis Research Unit, Division of Plant Sciences
  • Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan

References

  1. 1.0 1.1 Iwamoto M, Baba-Kasai A, Kiyota S, Hara N, Takano M. ACO1, a gene for aminocyclopropane-1-carboxylate oxidase: effects on internode elongation at the heading stage in rice. Plant Cell Environ. 2010 May;33(5):805-15. doi: 10.1111/j.1365-3040.2009.02106.x. PubMed PMID: 20040065.


Structured Information