Difference between revisions of "Os02g0809800"

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Please input one-sentence summary here.
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The rice '''Os02g0809800''' was reported as ''' Ospho1;2''' in 2010 <ref name="ref1" /> by researchers from the France.  
 
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<br>
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''Os02g0809800 <=> Ospho1;2'''
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<br>
 
===Function===
 
===Function===
Please input function information here.
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*'''OsPHO1;2''' as playing a key role in the transfer of Pi from roots to shoots in rice, and indicate that this gene could be regulated by its cis-natural antisense transcripts.
 
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*All three rice '''PHO1''' genes have a cis-natural antisense transcript located at the 5# end of the genes.
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*'''PHO1''' homologs in monocotyledons and dicotyledons revealed the emergence of a distinct clade of PHO1 genes in dicotyledons, which include members having roles other than long-distance Pi transport.
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<br>
 
===Expression===
 
===Expression===
Please input expression information here.
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*Characterization of '''Ospho1;1''' and '''Ospho1;2''' insertion mutants revealed that only '''Ospho1;2''' mutants had defects in Pi homeostasis, namely strong reduction in Pi transfer from root to shoot, which was accompanied by low-shoot and high-root Pi.  
 
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<br>
===Evolution===
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===Mutant===
Please input evolution information here.
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*Characterization of '''Ospho1;1''' and '''Ospho1;2''' insertion mutants revealed that only '''Ospho1;2''' mutants had defects in Pi homeostasis, namely strong reduction in Pi transfer from root to shoot, which was accompanied by low-shoot and high-root Pi.  
 
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<br>
You can also add sub-section(s) at will.
 
  
 
==Labs working on this gene==
 
==Labs working on this gene==
Please input related labs here.
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*De ´partement de Biologie Mole ´culaire Ve ´ge ´tale, Biophore, Universite ´ de Lausanne, CH–1015 Lausanne,Switzerland
 
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<br>
 
==References==
 
==References==
Please input cited references here.
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<references>
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<ref name="ref1">
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Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons
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</ref>
  
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</references>
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<br>
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
GeneName = Os02g0809800|
 
Description = SPX, N-terminal domain containing protein|
 
Version = NM_001054999.1 GI:115449426 GeneID:4331090|
 
Length = 5291 bp|
 
Definition = Oryza sativa Japonica Group Os02g0809800, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
 
AP = Chromosome 2:35496586..35501876|
 
CDS = 35496759..35497031,35497131..35497184,35497274..35497565,35497684..35498080,35498748..35498799<br>,35499139..35499213,35499345..35499472,35499578..35499700,35499956..35500199<br>,35500290..35500394,35500478..35500522,35500611..35500763,35500849..35501130<br>,35501212..35501348,35501433..35501520|
 
GCID = <gbrowseImage1>
 
name=NC_008395:35496586..35501876
 
source=RiceChromosome02
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008395:35496586..35501876
 
source=RiceChromosome02
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggtgaagttctcgagggagtacgaggcgagcatcataccggagtggaaggctgcgttcgtcgactacaagcggctcaagaagctcatcaagaggatcaaggtcacccgccgcgacgactccttcgccgccgccaacgccgcagccgcagccgaccaccttctcccgccgccgcccgcagagaaggaagccggtggctatgggttctccattcttgaccccgttcgcgccatcgccgcccgcttctccgctggacaacagccttctgcctcagaggatgaggagtgcccggacagaggggagctcgtgcgatccacggacaagcatgagagggagttcatggagagggcggacgaggagctggagaaggtgaacgcgttctacacggggcaggaggcggagctgctggcgcgcggcgacgcgctgctggagcagctccggatcctcgccgacgtcaagcgcatcctcgccgaccacgccgccgcccgccgcgcccgcggcctcgcccgaagccgctctatgccgccgccgccgccgtcctcctcgccgccgtcgtcggtgcacggctccagcggccgctacctcctctccggcctctcctcgccgcagtccatgtcagatgggagcctggagttgcagcaggcgcaggtgtcggagggcgcggcggtggcggacgaggtgatggcggcgctggagcggaacggcgtcagcttcgtggggctcgccgggaagaaggacggcaagaccaaggacggcagcggcaaagggcggggcggcggcggcggcggaggcggaggcgtgctgcagctgccagcgacggtgaggatcgacatcccggcgacgagccccgggcgggcggcgctcaaggtgtgggaggagctcgtgaacgtgctccgcaaggacggcgccgaccccgccgcggcgttcgtccaccggaagaagatccagcacgccgagaagaacatccgcgacgccttcatggcgctctaccgcggcctcgagctgctcaagaaattcagctctctcaatgtaaaggctttcaccaaaatattgaagaaatttgtcaaggtgtccgagcaacagcgagctacagacctgttttcagagaaggtgaagaggtcgccatttagcagctccgacaaggtacttcagctagcagatgaggtcgagtgcatcttcatgaagcatttcacaggcaatgacaggaaggtggcgatgaaataccttaagccacagcagcccagaaacactcacatgatcaccttcctcgtaggtttgttcacgggcacttttgtttcactgttcatcatatacgcgattttagcccatgttagtggtatttttacttccactgggaactcagcctacatggaaattgtgtaccatgttttcagcatgtttgctctcatcagcctccacatcttcctgtatgggtgcaacctcttcatgtggaagaacacaaggatcaatcacaacttcatattcgatttctcctcaaacaccgccttgacgcaccgggacgccttcctcatgtctgcatcgataatgtgcactgttgtcgctgcactggtcatcaatcttttcctcaagaacgccggtgtagcctatgccaatgctttgcctggagcactcctactactgtcaacaggtgtactattctgtccatttgacatattctaccgctcgacgcgatactgcttcatgcgtgtcatgcgcaatatcatattttcaccattctataaggttctgatggctgatttcttcatggctgaccaactaactagccagattccactattacggcacatggaatttacagcgtgctacttcatggctggaagctttagaactcacccatatgagacctgtactagtggccaacaatataagcatctggcctatgtgatctcctttctcccatacttctggagagccttgcagtgtttaagaaggtacttggaggaaggacatgatatcaaccaacttgctaatgctggaaaatatgtatcagcaatggtagcagctgctgttaggttcaaatatgctgcaacaccaacaccattctgggtgtggatggtcatcatttcatcctcaggtgccacaatttaccagctctactgggactttgtcaaggactggggcttcttaaacccaaaatcaaagaaccgatggcttcgtaacgagctcatcttgaagaataaatcaatctactacgtatccatgatgctcaatcttgcacttcgcctagcatggactgagagtgtaatgaagatccatattggtaaggttgagtcgcgcttactggatttctcgctcgcttcactagagataatcagacgaggccattggaacttctatagattggagaatgaacatttgaacaacgttggcaagttcagagcagtgaagactgtcccattaccattccgtgaacttgaaactgattga</cdnaseq>|
 
AA = <aaseq>MVKFSREYEASIIPEWKAAFVDYKRLKKLIKRIKVTRRDDSFAA                    ANAAAAADHLLPPPPAEKEAGGYGFSILDPVRAIAARFSAGQQPSASEDEECPDRGEL                    VRSTDKHEREFMERADEELEKVNAFYTGQEAELLARGDALLEQLRILADVKRILADHA                    AARRARGLARSRSMPPPPPSSSPPSSVHGSSGRYLLSGLSSPQSMSDGSLELQQAQVS                    EGAAVADEVMAALERNGVSFVGLAGKKDGKTKDGSGKGRGGGGGGGGGVLQLPATVRI                    DIPATSPGRAALKVWEELVNVLRKDGADPAAAFVHRKKIQHAEKNIRDAFMALYRGLE                    LLKKFSSLNVKAFTKILKKFVKVSEQQRATDLFSEKVKRSPFSSSDKVLQLADEVECI                    FMKHFTGNDRKVAMKYLKPQQPRNTHMITFLVGLFTGTFVSLFIIYAILAHVSGIFTS                    TGNSAYMEIVYHVFSMFALISLHIFLYGCNLFMWKNTRINHNFIFDFSSNTALTHRDA                    FLMSASIMCTVVAALVINLFLKNAGVAYANALPGALLLLSTGVLFCPFDIFYRSTRYC                    FMRVMRNIIFSPFYKVLMADFFMADQLTSQIPLLRHMEFTACYFMAGSFRTHPYETCT                    SGQQYKHLAYVISFLPYFWRALQCLRRYLEEGHDINQLANAGKYVSAMVAAAVRFKYA                    ATPTPFWVWMVIISSSGATIYQLYWDFVKDWGFLNPKSKNRWLRNELILKNKSIYYVS                    MMLNLALRLAWTESVMKIHIGKVESRLLDFSLASLEIIRRGHWNFYRLENEHLNNVGK                    FRAVKTVPLPFRELETD</aaseq>|
 
DNA = <dnaseqindica>174..446#546..599#689..980#1099..1495#2163..2214#2554..2628#2760..2887#2993..3115#3371..3614#3705..3809#3893..3937#4026..4178#4264..4545#4627..4763#4848..4935#gcgagatcatccctgcctgcctgtccctttcctgcatccatccatccatcttgatcttctcctagctcgattccacacatgtgaacgtacgtacgtttcagttaattgttcgatcgatcgatcgatcagctgctgctgctgctgctgcaacgaggaagaagaagaagaagaagatggtgaagttctcgagggagtacgaggcgagcatcataccggagtggaaggctgcgttcgtcgactacaagcggctcaagaagctcatcaagaggatcaaggtcacccgccgcgacgactccttcgccgccgccaacgccgcagccgcagccgaccaccttctcccgccgccgcccgcagagaaggaagccggtggctatgggttctccattcttgaccccgttcgcgccatcgccgcccgcttctccgctggacaacagccttctgcctcagtacgtcgtcgttgtgtctcgaatcaaatactaactaataaacgtgtattaattaattaatacacatttctgatgttaatacgtatgtgcatttcgcaggaggatgaggagtgcccggacagaggggagctcgtgcgatccacggacaagcatgtataaaattaattagttaatttgattgtaaataaaactaagtaattaaattgattgtaaaaatggagatgcatggatggatggtgtaggagagggagttcatggagagggcggacgaggagctggagaaggtgaacgcgttctacacggggcaggaggcggagctgctggcgcgcggcgacgcgctgctggagcagctccggatcctcgccgacgtcaagcgcatcctcgccgaccacgccgccgcccgccgcgcccgcggcctcgcccgaagccgctctatgccgccgccgccgccgtcctcctcgccgccgtcgtcggtgcacggctccagcggccgctacctcctctccggcctctcctcgccgcagtccatgtcaggtaggtgacaccaaccacccacacacatgaatcctgggctagctgcacatctctttatgcatgcaatgtcatgtcatgtcgatgtcgccgtcgtcgtcgtcgatggcgtgttttgcagatgggagcctggagttgcagcaggcgcaggtgtcggagggcgcggcggtggcggacgaggtgatggcggcgctggagcggaacggcgtcagcttcgtggggctcgccgggaagaaggacggcaagaccaaggacggcagcggcaaagggcggggcggcggcggcggcggaggcggaggcgtgctgcagctgccagcgacggtgaggatcgacatcccggcgacgagccccgggcgggcggcgctcaaggtgtgggaggagctcgtgaacgtgctccgcaaggacggcgccgaccccgccgcggcgttcgtccaccggaagaagatccagcacgccgagaagaacatccgcgacgccttcatggcgctctaccgcggcctcgagctgctcaagaaattcaggcacatcttccctcttcatctttcctttttgccatatctgacaagctaaaaccacgaagtcacggtattttagaacaagacttgccttttgtgtctatgtatattgtcttctatgccatgcatgatgcatatatatacgcatttgtaagctatttagaattctgatggccaaacctcacactaatagcatgcaactgatcgatcacactaattgcatgcacacaaatgatatagatagtttggttaactgaccaactaggaaaaaaaaattaagttgtttcttcatagatgtatatctaacaaattactactatgaatattagttgcagcatgagtcatggagcactgtgtgagcagcacacaactacacctgcactgcacccaagcatgcagtacagtagtagtttagtcaaatttcaaccccgttttgcatggaagcatccgtgtaaatcacgtagccatccatacaccatcctgtgtcacctgaaagcgactgtttctcctttcaaattactaattcttttgtggtttttgaaaaggtagattaattcaccggttattttaggtggctgtctttatatttcttttacttgtcaattatggtgttcttgtggttctgacggatttggatgcttttttggttgcatgcatggatggatgggagcagctctctcaatgtaaaggctttcaccaaaatattgaagaaatttgtcaaggtaatatactaattagccacatctgtgcccttttgaaatggatggatggaagaatgaagagtctaaataatagatgataaagattaaagaaaaccggtctacatatataaggcttctaggagaataaagttctaagtgtactattagtagtttagtaccctcaaagcagaggtactagatctcattctcgacagtgtaatcctagtcactagtcagcctaataacatgagacagcataaacattttcttgcaaggaataatttaattttttaatatatttttttaaaaaaatgctactccgagctgacagtgactggtacgaactgctttgcatttcaggtgtccgagcaacagcgagctacagacctgttttcagagaaggtgaagaggtcgccatttagcagctccgacaaggtatcatctggtgctccacaatcctactgcaaagctgcacaaacatacaaattcacttcaatcagttttttgggggatggaaacatgtctctctgacgaatatgaactgaagcatgcgaaattctgaacaggtacttcagctagcagatgaggtcgagtgcatcttcatgaagcatttcacaggcaatgacaggaaggtggcgatgaaataccttaagccacagcagcccagaaacactcacatgatcaccttcctcgtaggcatgtagctgagcaacttcaagatcagaatatcagatctgtcatctgcatttggcacacaaatctaacttcacttcttcttttttttcatgttctaatttgcaggtttgttcacgggcacttttgtttcactgttcatcatatacgcgattttagcccatgttagtggtatttttacttccactgggaactcagcctacatggaaattgtgtaccatgttttcaggtaaattcttgagaattacggttcagttctaggggtaaagcactatttagaaatagattttttattactgcgtttgtacttggtacttctgttcaggctatatatgctctgttcttgacaagagttcaattgattagatttagcatgtgggctcaatgtttgcaaatttttcaaatttcagacttaggacctcatgataataaaagatgcaattttacctcaaagtaatgtatagatgtgaccttgcttctgcagcatgtttgctctcatcagcctccacatcttcctgtatgggtgcaacctcttcatgtggaagaacacaaggatcaatcacaacttcatattcgatttctcctcaaacaccgccttgacgcaccgggacgccttcctcatgtctgcatcgataatgtgcactgttgtcgctgcactggtcatcaatcttttcctcaagaacgccggtgtagcctatgccaatgctttgcctggagcactcctactagtaagaaacataaactttgggaaaatttggtaattcagctctgtttcatgtactgattttcagttctcaactcggattctgttgtttcagctgtcaacaggtgtactattctgtccatttgacatattctaccgctcgacgcgatactgcttcatgcgtgtcatgcgcaatatcatattttcaccattctataaggtaaagactaaagacctcatgagttttcttatcacaaattgttgaaagcatctatctgataagcaggctgctttgacatgcaggttctgatggctgatttcttcatggctgaccaactaactagccaggtaatactgaagaaactgaactttacactagagcttttgagagttggagctcagcatcttatgagtgaactggtgctactatctgcagattccactattacggcacatggaatttacagcgtgctacttcatggctggaagctttagaactcacccatatgagacctgtactagtggccaacaatataagcatctggcctatgtgatctcctttctcccatacttctggagagccttgcaggtatgaatctttagatgggaaatactaacgattaacaactttgtttggatcagtttcaaactaatagctgtgtcatgttttgaagtgtttaagaaggtacttggaggaaggacatgatatcaaccaacttgctaatgctggaaaatatgtatcagcaatggtagcagctgctgttaggttcaaatatgctgcaacaccaacaccattctgggtgtggatggtcatcatttcatcctcaggtgccacaatttaccagctctactgggactttgtcaaggactggggcttcttaaacccaaaatcaaagaaccgatggcttcgtaacgagctcatcttgaagaataaatcaatctactacgtatccatggtactatgcttaatatacttcatttctgactaggctagaaaattccagatctaggacactaatgccttcaaataattacagatgctcaatcttgcacttcgcctagcatggactgagagtgtaatgaagatccatattggtaaggttgagtcgcgcttactggatttctcgctcgcttcactagagataatcagacgaggccattggaacttctataggtaattggaagtacttttacaaggaacatcaattttaatttaatgttatggtgtaacatggtgaaatggtttatgggattgcagattggagaatgaacatttgaacaacgttggcaagttcagagcagtgaagactgtcccattaccattccgtgaacttgaaactgattgattaagcagtaggacatgccggcatgctgccaacatcaaggccagtaaggatcagagttccaggaatggagatgctgcttgccgctagatttggtacataagtggtaataaagtttgcagagaccattggtgcacaagaccatgatgttgctgattaggatggaataagcttaaatcagagcagctaatcgaggcagttcgtcaaaaaagaaggaataatcccttcttggtccgatgaagattgttgggcgtcatttcgctaacaagatcttaattttgtttatggttgtgttatgtatgtatctggagatggatgcccaccctccaaaaaaaatattccatgaattcatatgcacc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054999.1 RefSeq:Os02g0809800]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 2]]
 
[[Category:Chromosome 2]]
 

Latest revision as of 03:33, 21 November 2016

The rice Os02g0809800 was reported as Ospho1;2 in 2010 [1] by researchers from the France.

Annotated Information

Gene Symbol

  • Os02g0809800 <=> Ospho1;2


Function

  • OsPHO1;2 as playing a key role in the transfer of Pi from roots to shoots in rice, and indicate that this gene could be regulated by its cis-natural antisense transcripts.
  • All three rice PHO1 genes have a cis-natural antisense transcript located at the 5# end of the genes.
  • PHO1 homologs in monocotyledons and dicotyledons revealed the emergence of a distinct clade of PHO1 genes in dicotyledons, which include members having roles other than long-distance Pi transport.


Expression

  • Characterization of Ospho1;1 and Ospho1;2 insertion mutants revealed that only Ospho1;2 mutants had defects in Pi homeostasis, namely strong reduction in Pi transfer from root to shoot, which was accompanied by low-shoot and high-root Pi.


Mutant

  • Characterization of Ospho1;1 and Ospho1;2 insertion mutants revealed that only Ospho1;2 mutants had defects in Pi homeostasis, namely strong reduction in Pi transfer from root to shoot, which was accompanied by low-shoot and high-root Pi.


Labs working on this gene

  • De ´partement de Biologie Mole ´culaire Ve ´ge ´tale, Biophore, Universite ´ de Lausanne, CH–1015 Lausanne,Switzerland


References

  1. Characterization of the Rice PHO1 Gene Family Reveals a Key Role for OsPHO1;2 in Phosphate Homeostasis and the Evolution of a Distinct Clade in Dicotyledons


Structured Information