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| − | {{JaponicaGene|
| + | The rice '''Os08g0538300''' was reported as ''' OsCERK1''' in 2010 <ref name="ref1" /> by researchers from the Japan. |
| − | GeneName = Os08g0538300|
| + | <br> |
| − | Description = Similar to LysM domain-containing receptor-like kinase 3|
| + | ==Annotated Information== |
| − | Version = NM_001068905.1 GI:115477548 GeneID:4346173|
| + | ===Gene Symbol=== |
| − | Length = 4366 bp|
| + | *'''Os08g0189200 <=> OsCERK1''' |
| − | Definition = Oryza sativa Japonica Group Os08g0538300, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *A plasma membrane glycoprotein, CEBiP(chitin elicitor binding protein) and a receptor kinase, '''CERK1''' (chitin elicitor receptor kinase) (also known as LysM-RLK1), were identified as critical components for chitin signaling in rice and Arabidopsis, respectively. |
| | + | <br> |
| | + | ===Mutant=== |
| | + | *Knockdown of '''OsCERK1''' resulted in marked suppression of the defense responses induced by chitin oligosaccharides, indicating that '''OsCERK1''' is essential for chitin signaling in rice. |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *Department of Life Sciences, Faculty of Agriculture, Meiji University, 1-1-1 Higashi-Mita, Tama-ku, Kawasaki, Kanagawa 214-8571, Japan, |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *Division of Plant Sciences, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602,Japan, |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan |
| − | |
| + | <br> |
| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
| + | |
| − | AP = Chromosome 8:26997132..27001497|
| + | ==References== |
| − | CDS = 26998635..26998644,26998889..26999038,26999445..26999635,26999838..26999927,27000080..27000173<br>,27000255..27000406,27000497..27000594,27000707..27000845,27000933..27001031<br>,27001130..27001294|
| + | <references> |
| − | GCID = <gbrowseImage1>
| + | <ref name="ref1"> |
| − | name=NC_008401:26997132..27001497
| + | Two LysM receptor molecules, CEBiP and OsCERK1,cooperatively regulate chitin elicitor signaling in rice |
| − | source=RiceChromosome08
| + | </ref> |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>| | + | </references> |
| − | GSID = <gbrowseImage2>
| + | <br> |
| − | name=NC_008401:26997132..27001497 | + | |
| − | source=RiceChromosome08
| + | ==Structured Information== |
| − | preset=GeneLocation
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>aatcaccagggaaagggagcttctgcaggagctatagcaggaggtgttgtggctggtgtcgttgtgcttgctgccatcttcttgtatatcatattctataggaggagaaaggcaaaacaggccaccctgcttcaatcatctgaagattccacacaacttggtacgatatccatggataaagttaccccatcaacaattgttggcccttcaccagttgcaggcattacagttgacaaatcagtagagttctcatatgaagaactttctaatgctacacaggggtttagtattggcaataaaatagggcaaggtggttttggtgctgtctattatgctgaacttagaggcgagaaagctgccatcaagaaaatggacatgcaggctactcatgagttccttgctgaattaaaggttttgacacatgttcatcatctgaacctggtgcgtttgattggttattgcatcgagagctctttgttccttgtctatgaatttatcgagaatggcaacttgagccagcatttgcgtggaatgggttatgaacctttgtcttgggctgccaggattcaaattgcactagattcagcaagaggtcttgaatacattcatgaacatactgttccagtatacatacatcgggacatcaaatcagcaaacatcttgatagacaagaactaccgggcaaaggttgcagattttggtttaacaaagcttacagaagttggtggtacatcaatgcccacaggcacacgtgttgttggtacatttggttacatgcctccagagtatgctcgatatggagatgtttctcctaaggttgacgtctacgcctttggtgttgtcctctacgaacttatttcagcgaaagaagccatagtcagatcaaccgaatcttcaagtgattcaaaggggctggtttatctgtttgaggaggccctcaactcgccggatcccaaggaaggccttaggacgttgattgatccaaagctaggagaagattatcctattgattccattctcaagctgacacaactcgcaaaggtgtgcacacaagaagaccccaagctgaggccttcaatgagatccgtggtcgtcgcgctgatgacgctttcatccacaagtgagttctgggacatgaacaacctgtatgagaaccaaggtttggtcaacctaatgtccgggagatag</cdnaseq>|
| |
| − | AA = <aaseq>NHQGKGASAGAIAGGVVAGVVVLAAIFLYIIFYRRRKAKQATLL QSSEDSTQLGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIG QGGFGAVYYAELRGEKAAIKKMDMQATHEFLAELKVLTHVHHLNLVRLIGYCIESSLF LVYEFIENGNLSQHLRGMGYEPLSWAARIQIALDSARGLEYIHEHTVPVYIHRDIKSA NILIDKNYRAKVADFGLTKLTEVGGTSMPTGTRVVGTFGYMPPEYARYGDVSPKVDVY AFGVVLYELISAKEAIVRSTESSSDSKGLVYLFEEALNSPDPKEGLRTLIDPKLGEDY PIDSILKLTQLAKVCTQEDPKLRPSMRSVVVALMTLSSTSEFWDMNNLYENQGLVNLM SGR</aaseq>|
| |
| − | DNA = <dnaseqindica>1504..1513#1758..1907#2314..2504#2707..2796#2949..3042#3124..3275#3366..3463#3576..3714#3802..3900#3999..4163#acgcttcagccgcggctagggtttcgtcgcgagcgacctcccgccgcccgccatggaagcttccacctccctcctagtcctcgtcctcgccgccgcggcgttcgcggcggggacggtgacggaggcggcgggggacgggtgcagcgccgggtgcgacctcgcgctggcttccttctacgtgacgccgaaccagaacgtcaccaacatggcggatctcttcggcatcggcgcggcgaactaccgcagcctcgcgccctacaacccgaacatccccaacctcgacttcatcaacgtcggcggccgcgtcaacgtctacttcacctgcggctgccgctcgctgccgggctcgccgggagccacctacctcgccggcgccttccccttccagatgtcccgcggccagatctacacctccgtcgccgccaactacaacaacctcaccaccgccgagtggctgcaggccaccaacagctacccggccaacaacatcccggacaccgccgtcatcaacgccaccgtcaactgctcctgcggcgacgccagcatctcgccggactacgggctgttcctcacctacccgctccgcgccgaggatacgctcgcctccgtcgcggcgacctacgggctctcgtcgcagctggacgtggtcaggaggtacaacccggggatggagagcgccacggggagtggaatcgtgtacatccccgtcaaaggtgaggtttcgcagcttcctcttgtggatgctgctgctgctgctgctgttccatgtgaattgtggggaattcggttcaaatttggcatttcattagttcattttgatgcgaattgaggaattctagggattaggcgattagttactgtaggggactgaggggatttttttgttggtaggtttgtactagctagaaaatgagcggttatttgaagcagttttggactggatgccctgaaattgatttggattagttacctgggagaaaagggggaagtgtatgcatagcagctatattgttggagttatattggttgtgtttgcaattgcgttattgcacaattgaactgattgattgaactctggctatggcactccccacacactatcatccttcatatgccctttttgacgctcaaatagcttggaattccttttatgctttgtggaaattctacctgcatgctaactcaataagcatgaggctcagaatcatcttggcattactgttaatttagagaaacaaaattgactggaattgctttgttttagtaaaatggaaccaaaggtctcctcatatggctctataagattccaagtgtgatcatcgatgatccttctgctgatactcagttggcatgattgaggcttaattcaattcattgcatctccttttcctctcgacaaaacaattaacataaattatatgctctgtaggattgatgtaatcttgctaatatggtttactgtggttggtttttcagatcccaatggaagttacctacctctgaaatcaccagggtaagtgctggtagattgctgtatagtcctatccacttggattgcattgctattgttcctgttgtttttattctttttgcagttatgctgataagtatcctcattttgtgcagtacaggcagcttctgtcctttgcaagctaattatgcgtctgcatgaaggtttccgctaagcaaaattggaagccgttgattcttgcaagagaaccatgatgctatacttaactctcaactgtttggatcaggaaagggagcttctgcaggagctatagcaggaggtgttgtggctggtgtcgttgtgcttgctgccatcttcttgtatatcatattctataggaggagaaaggcaaaacaggccaccctgcttcaatcatctgaagattccacacaacttggtaataataagcttatgtagatttgaactctatgtctctgacccttcatcagatatttatctttagaaaggcgtatgcaagccctgattttacctgcaagttaattttgccctctgttcatatcagcaatggcttagtttgttggtactgtccttttaagtgattattttgcaacgatttaaatggttattttgttcaagggcctggggatgtagtggagtaagtagattttttttggtacccatgaatttgttttaggggactcttactccagagtttttcttgtgtggcttataagtgtaattttgaatgtgcttcttccctgagtgatttttctccttcctgatgagtacaatagaatggaatttcctctgtttctaacatactactgtttttgttccagcaggtacgatatccatggataaagttaccccatcaacaattgttggcccttcaccagttgcaggcattacagttgacaaatcagtagagttctcatatgaagaactttctaatgctacacaggggtttagtattggcaataaaatagggcaaggtggttttggtgctgtctattatgctgaacttagaggcgaggttagctcaaaattttctcagatgaatatgtaacaaaagtacatttccaatccaaaatcatcttcgagtcatgacatcatctaatgcttggacatgtactagcaaaataagacacagttatgatgatccattcattgtgatcatttgctactgttatcgtctttgctccaaaatgacttccctgtttctcttgtttctctagaaagctgccatcaagaaaatggacatgcaggctactcatgagttccttgctgaattaaaggttttgacacatgttcatcatctgaacctggtaagtgatttttaaatatattttttcctaggcatcagaagaatcttttccacccctcctgttcccttgcataaatacatataggtagtctgcattcaggttaatctgttttcttttcttccattctcaatgttcgatatattttcatacaggtgcgtttgattggttattgcatcgagagctctttgttccttgtctatgaatttatcgagaatggcaacttgagccagcatttgcgtggaatgggtattgtgttgcctcttgaataagttggtcatgccaattttgatgctttctgcaaattaatcttattcactcttgtaataggttatgaacctttgtcttgggctgccaggattcaaattgcactagattcagcaagaggtcttgaatacattcatgaacatactgttccagtatacatacatcgggacatcaaatcagcaaacatcttgatagacaagaactaccgggcaaaggttggaataattcacgatttcacgtgttccttttccttttattttctatttttgcttatccttcatgtaattattatgtatacctttcaggttgcagattttggtttaacaaagcttacagaagttggtggtacatcaatgcccacaggcacacgtgttgttggtacatttggttacatgcctccagagtatgtctcttaaatttttgtttgcccattagatatgggtgcaaaattgcagagcaaccccatctgtgaatctgtgttggaagcttatatgcatggaacatgccgtttgcaggtatgctcgatatggagatgtttctcctaaggttgacgtctacgcctttggtgttgtcctctacgaacttatttcagcgaaagaagccatagtcagatcaaccgaatcttcaagtgattcaaaggggctggtttatctggtgattttccctgctcaactaactagttactttctgccattgttctttcaagaaacagtccattacttacagcactgaaaactgcagtttgaggaggccctcaactcgccggatcccaaggaaggccttaggacgttgattgatccaaagctaggagaagattatcctattgattccattctcaaggttaaaaccatgcagaaaaaaatgccattgcatattcgcttttcccgtgtggttgatgaaatacttgaaggctaaaagaaatccattgcattttgcagctgacacaactcgcaaaggtgtgcacacaagaagaccccaagctgaggccttcaatgagatccgtggtcgtcgcgctgatgacgctttcatccacaagtgagttctgggacatgaacaacctgtatgagaaccaaggtttggtcaacctaatgtccgggagatagtgactttggtgccgcctgcacactgggaaaattgtacattcaggctcatctgaagtgtgtaatgacagccattacattgttttgtcatctttgttattcttttcttttttgctgttcctacttagagaccttagacatctggaaggctatatgtaagatattgacttctacattccaatggaaataaataaatattatcctgt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068905.1 RefSeq:Os08g0538300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
| |
| − | [[Category:Chromosome 8]]
| |
