Difference between revisions of "Os08g0564000"

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(Created page with "{{JaponicaGene| GeneName = Os08g0564000| Description = Similar to Phosphate transporter 6| Version = NM_001069062.1 GI:115477862 GeneID:4346342| Length = 1827 bp| Definit...")
 
 
(2 intermediate revisions by 2 users not shown)
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{{JaponicaGene|
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The rice '''Os08g0564000''' was reported as '''OsPT6''' in 2009 <ref name="ref1" /> by researchers from the China.
GeneName = Os08g0564000|
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<br>
Description = Similar to Phosphate transporter 6|
+
==Annotated Information==
Version = NM_001069062.1 GI:115477862 GeneID:4346342|
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===Gene Symbol===
Length = 1827 bp|
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*'''Os08g0564000 <=> OsPT6'''
Definition = Oryza sativa Japonica Group Os08g0564000, complete gene.|
+
<br>
Source = Oryza sativa Japonica Group
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===Function===
 +
*'''OsPT6''' plays a broad role in Pi uptake and translocation throughout the plant.
 +
<br>
 +
===Expression===
 +
*Expression of both genes '''OsPht1;2 (OsPT2)''' and OsPht1;6 ('''OsPT6''') increased significantly under Pi deprivation in roots and shoots. By using transgenic rice plants expressing the GUS reporter gene, driven by their promoters, we detected that OsPT2 was localized exclusively in the stele of primary and lateral roots, whereas '''OsPT6''' was expressed in both epidermal and cortical cells of the younger primary and lateral roots.
 +
<br>
 +
===Evolution===
 +
*'''OsPT6''', but not OsPT2, was able to complement a yeast Pi uptake mutant in the highaffinity concentration range.
 +
*In transgenic rice, the knock-down of either OsPT2 or '''OsPT6''' expression by RNA interference significantly decreased both the uptake and the long-distance transport of Pi from roots to shoots.  
 +
<br>
 +
==Labs working on this gene==
 +
*State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences,Nanjing Agricultural University, Nanjing 210095, China,
 +
*The Center for Cell and Molecular Signaling, School of Medicine, Emory University, 30322 USA,
 +
*State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University, Hangzhou 310029,China,
 +
*Centre for Soils and Ecosystem Function, Rothamsted Research, Harpenden, Hertfordshire AL5 2JQ, UK
 +
<br>
 +
==References==
 +
<references>
 +
<ref name="ref1">
 +
Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation
 +
</ref>
  
  ORGANISM  Oryza sativa Japonica Group
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</references>
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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<br>
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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==Structured Information==
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:28332207..28334033|
 
CDS = 28332236..28333840|
 
GCID = <gbrowseImage1>
 
name=NC_008401:28332207..28334033
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:28332207..28334033
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgggcggcggcggcggggagcagcagcagcttgaggtgctccacgccctggacgtggccaagacgcaatggtaccatttcacggccatcgtggtggccggaatggggttcttcaccgacgcctatgacctcttctgcatctccctcgtcaccaagctgctgggccgcatctactaccgcgtcgacgggtccccgtcccccggcacgctccccccgcacgtctccgcctccgtcaacggcgtggccttcgtgggcacgctctcagggcaactcttctttggctggctgggcgacaagctcggccgtaagcgcgtctatggcatcaccctcatgctcatggtgctctgctccctcgcctccgcgctctcctttggccacaccccgacctccgtcatggccaccctctgcttcttccgcttctggctcggcttcggcatcggcggcgactacccgctctccgccaccatcatgtccgagtacgccaacaagaagacgcgtggcgccttcatcgccgccgtcttcgcgatgcagggcttcggcatcatcaccggcggcctcgtcgccatcctcgtctccgcctccttcagggccgccttcccggcgcctccctacggcgaggaccccgtggcctccacgccgccgcaggccgacttcgtgtggaggatcatactcatgctgggcgcgctgccggcggcgctcacctactactggcgcaccaagatgcccgagacggcgcgctacacggcgctcgtggccaacaacgccaagcaggccgcggccgacatgtccaaggtgctgcaggtggtggagatgcgtaatattggtaataatggtggcagcaggaggccgttcgggctgttctccggcgagtttgtccggcggcacgggctgcacctggtgggcacgtcggcgacgtggttgctgctggacattgcgttctacagccagaacctgttccagaaggacatattcagcgcggtggggtggatccccaaggcggcgacgatgagcgcgctggaggagctgttccgcatcgcgcgggcgcagacgctgatcgcgctgtgcgggacggtgcccggctactggttcaccgtcgcgctcatcgacgtggtgggccgtttcaagatccaggccgttggcttcttcatgatgaccctcttcatgctcaccctcgccctgccgtaccaccactggacggcgccggggaagaaccacgtcggcttcctgctgctctacggcctcaccttcttcttcgccaacttcggccccaactccaccaccttcatcgtgccggcggagattttcccggcgcggctgcgggccacgtgccacggcatctcggcggcgtcggggaagctgggcgccatcgtcggatccttcgggttcctgtacctggcgcagagccccgaccggagcaagacggagcacgggtaccctccgggcatcggcgtccgcaactcgctcttcctgctcgccgcctgcaacctgctgggcctgctcttcaccttcctcgtgccggagtccaaggggaagtcgctggaggagatgtccggcgacgccgaggcccaggaggaggcgccgccgcccctgcaaactgtactgtag</cdnaseq>|
 
AA = <aaseq>MGGGGGEQQQLEVLHALDVAKTQWYHFTAIVVAGMGFFTDAYDL                    FCISLVTKLLGRIYYRVDGSPSPGTLPPHVSASVNGVAFVGTLSGQLFFGWLGDKLGR                    KRVYGITLMLMVLCSLASALSFGHTPTSVMATLCFFRFWLGFGIGGDYPLSATIMSEY                    ANKKTRGAFIAAVFAMQGFGIITGGLVAILVSASFRAAFPAPPYGEDPVASTPPQADF                    VWRIILMLGALPAALTYYWRTKMPETARYTALVANNAKQAAADMSKVLQVVEMRNIGN                    NGGSRRPFGLFSGEFVRRHGLHLVGTSATWLLLDIAFYSQNLFQKDIFSAVGWIPKAA                    TMSALEELFRIARAQTLIALCGTVPGYWFTVALIDVVGRFKIQAVGFFMMTLFMLTLA                    LPYHHWTAPGKNHVGFLLLYGLTFFFANFGPNSTTFIVPAEIFPARLRATCHGISAAS                    GKLGAIVGSFGFLYLAQSPDRSKTEHGYPPGIGVRNSLFLLAACNLLGLLFTFLVPES                    KGKSLEEMSGDAEAQEEAPPPLQTVL</aaseq>|
 
DNA = <dnaseqindica>30..1634#atcatcacaaagcaagcaattaagctggcatgggcggcggcggcggggagcagcagcagcttgaggtgctccacgccctggacgtggccaagacgcaatggtaccatttcacggccatcgtggtggccggaatggggttcttcaccgacgcctatgacctcttctgcatctccctcgtcaccaagctgctgggccgcatctactaccgcgtcgacgggtccccgtcccccggcacgctccccccgcacgtctccgcctccgtcaacggcgtggccttcgtgggcacgctctcagggcaactcttctttggctggctgggcgacaagctcggccgtaagcgcgtctatggcatcaccctcatgctcatggtgctctgctccctcgcctccgcgctctcctttggccacaccccgacctccgtcatggccaccctctgcttcttccgcttctggctcggcttcggcatcggcggcgactacccgctctccgccaccatcatgtccgagtacgccaacaagaagacgcgtggcgccttcatcgccgccgtcttcgcgatgcagggcttcggcatcatcaccggcggcctcgtcgccatcctcgtctccgcctccttcagggccgccttcccggcgcctccctacggcgaggaccccgtggcctccacgccgccgcaggccgacttcgtgtggaggatcatactcatgctgggcgcgctgccggcggcgctcacctactactggcgcaccaagatgcccgagacggcgcgctacacggcgctcgtggccaacaacgccaagcaggccgcggccgacatgtccaaggtgctgcaggtggtggagatgcgtaatattggtaataatggtggcagcaggaggccgttcgggctgttctccggcgagtttgtccggcggcacgggctgcacctggtgggcacgtcggcgacgtggttgctgctggacattgcgttctacagccagaacctgttccagaaggacatattcagcgcggtggggtggatccccaaggcggcgacgatgagcgcgctggaggagctgttccgcatcgcgcgggcgcagacgctgatcgcgctgtgcgggacggtgcccggctactggttcaccgtcgcgctcatcgacgtggtgggccgtttcaagatccaggccgttggcttcttcatgatgaccctcttcatgctcaccctcgccctgccgtaccaccactggacggcgccggggaagaaccacgtcggcttcctgctgctctacggcctcaccttcttcttcgccaacttcggccccaactccaccaccttcatcgtgccggcggagattttcccggcgcggctgcgggccacgtgccacggcatctcggcggcgtcggggaagctgggcgccatcgtcggatccttcgggttcctgtacctggcgcagagccccgaccggagcaagacggagcacgggtaccctccgggcatcggcgtccgcaactcgctcttcctgctcgccgcctgcaacctgctgggcctgctcttcaccttcctcgtgccggagtccaaggggaagtcgctggaggagatgtccggcgacgccgaggcccaggaggaggcgccgccgcccctgcaaactgtactgtagcgctgtcgccgtctgcatatctatctatatatacatgcagatatatagccaccatataatataactgatcgatcgagaccagagaagatcgatcgaagaaaccgccagttgatatataactggcctggctatccactatatatatatatatatatatatatatattttgtcgttgtcgtcggcgacaccatgt</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069062.1 RefSeq:Os08g0564000]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 11:34, 1 December 2016

The rice Os08g0564000 was reported as OsPT6 in 2009 [1] by researchers from the China.

Annotated Information

Gene Symbol

  • Os08g0564000 <=> OsPT6


Function

  • OsPT6 plays a broad role in Pi uptake and translocation throughout the plant.


Expression

  • Expression of both genes OsPht1;2 (OsPT2) and OsPht1;6 (OsPT6) increased significantly under Pi deprivation in roots and shoots. By using transgenic rice plants expressing the GUS reporter gene, driven by their promoters, we detected that OsPT2 was localized exclusively in the stele of primary and lateral roots, whereas OsPT6 was expressed in both epidermal and cortical cells of the younger primary and lateral roots.


Evolution

  • OsPT6, but not OsPT2, was able to complement a yeast Pi uptake mutant in the highaffinity concentration range.
  • In transgenic rice, the knock-down of either OsPT2 or OsPT6 expression by RNA interference significantly decreased both the uptake and the long-distance transport of Pi from roots to shoots.


Labs working on this gene

  • State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences,Nanjing Agricultural University, Nanjing 210095, China,
  • The Center for Cell and Molecular Signaling, School of Medicine, Emory University, 30322 USA,
  • State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University, Hangzhou 310029,China,
  • Centre for Soils and Ecosystem Function, Rothamsted Research, Harpenden, Hertfordshire AL5 2JQ, UK


References

  1. Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation


Structured Information