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| − | Please input one-sentence summary here.
| + | The rice gene Os07g0490200 was reported as '''''OsCBT''''' in 2009<ref name="ref1" /> by researchers from Korea. |
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| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os07g0490200 <=> OsCBT, CBT |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * '''''OsCBT''''' gene, which encodes a calmodulin (CaM)-binding protein. |
| − | | + | * '''''OsCBT''''' might act as a negative regulator on plant defense. |
| − | ===Expression=== | + | ===Mutation=== |
| − | Please input expression information here.
| + | * The '''''oscbt-1''''' mutant exhibits reduced levels of '''''OsCBT''''' transcripts and no significant morphological changes compared to wild-type plant although the growth of the mutant is stunted. However, '''''oscbt-1''''' mutants showed significant resistance to two major rice pathogens. The growth of the rice blast fungus ''Magnaporthe grisea'', as well as the bacterial pathogen ''Xanthomonas oryzae pv. oryzae'' was significantly suppressed in '''''oscbt-1''''' plants. Histochemical analysis indicated that the hypersensitive-response was induced in the '''''oscbt-1''''' mutant in response to compatible strains of fungal pathogens. |
| | + | * The researchers also observed significant increase in the level of pathogenesis-related genes in the '''''oscbt-1''''' mutant even under pathogen-free condition. |
| | + | ===Expression === |
| | + | * '''''OsCBT''''' expression was induced upon challenge with fungal elicitor. |
| | | | |
| | ===Evolution=== | | ===Evolution=== |
| − | Please input evolution information here.
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * Division of Applied Life Science (Brain Korea 21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Gyeongsang National University, Jinju 660-701, Korea |
| | + | * National Institute of Crop Science, Rural Development Administration, Suwon 441-857, Korea |
| | + | * Department of Plant Science, Seoul National University, Seoul 151-742, Korea, 4School of Applied Biosciences, Kyungpook National University, Daegu 702-701, Korea |
| | + | ==References== |
| | + | <references> |
| | + | * <ref name="ref1"> |
| | + | Koo SC, Choi MS, Chun HJ, Shin DB, Park BS, Kim YH, Park HM, Seo HS, Song JT, |
| | + | Kang KY, Yun DJ, Chung WS, Cho MJ, Kim MC. The calmodulin-binding transcription |
| | + | factor OsCBT suppresses defense responses to pathogens in rice. Mol Cells. 2009 |
| | + | May 31;27(5):563-70. doi: 10.1007/s10059-009-0081-4. PubMed PMID: 19466605. |
| | + | |
| | + | </ref> |
| | + | </references> |
| | | | |
| − | ==References==
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| − | Please input cited references here.
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| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] |
| − | GeneName = Os07g0490200|
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| − | Description = Similar to Ankyrin repeat-rich membrane-spanning protein|
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| − | Version = NM_001066207.1 GI:115472146 GeneID:4343265|
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| − | Length = 12829 bp|
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| − | Definition = Oryza sativa Japonica Group Os07g0490200, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
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| − | AP = Chromosome 7:18865438..18878266|
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| − | CDS = 18865778..18865822,18866105..18866422,18866664..18867219,18867623..18868314,18868971..18869351<br>,18869896..18869978,18870054..18870149,18870355..18870523,18871235..18871280<br>,18872038..18872126,18872213..18872328,18877389..18877514,18878151..18878217<br>|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008400:18865438..18878266
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008400:18865438..18878266
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcgggagcgggcggatgggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaactgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattggaaaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggtaacgaagaaagggttcatgtctattatgctcgaggtgaagatgatccaaatttctttcgaagatgctactggctacttgacaaagatttggagcgcatagttcttgtgcattatcggcaaacagctgaggaaaatgcaatggctcctccgaacccagaacctgaagttgcagatgttcctacagtgaatttgatccattacacctctcctctgacctctgcagattcaacctctggtcatactgagctatctttgccagaggaaattaattcacatggtggcatatcagcttctagtgagactggcaatcatgattccagcctggaggagttttgggctaatcttttagagtcatctataaaaaacgacccaaaagttgttacttctgcctgcggtggttcctttgtgtccagtcagcagattaataatgggccgaagaattctggaaacattgtcaataccagtatggcaagtaatgctatcccagcacttaatgtggtgtcagaaacttatgctacaaatcatggcctcaatcaagtaaatgcaaatcattttggagctctgaagcatcaaggagatcagactcaatctcttttggcgtctgatgtagattctcaatcagatcaatttataagttcttcggtgaaatctccaatggatggtaacacatctattcctaatgaggtgcctgctaggcagaacagtcttggactgtggaagtacttggatgatgacagtcctggtttaggagataatccaagttcagttccacagagcttctgtccagtgaccaatgaaagactattagaaatcaatgagatctccccagaatgggcttactctacagagactaccaaggtcgtggtgattgggaatttctatgagcaatacaagcatttggctgggtctgctatgtttggtgtctttggtgagcaatgtgttgccggagatattgttcaaactggtgtttaccgtttcatggttggaccacatacacctggaaaagtggatttttatttgactttggatgggaaaacgccaatcagtgagatttgcagtttcacgtatcatgttatgcatggtagttccttggaggctaggctgccgccatctgaggatgattacaaaaggacaaatcttaagatgcagatgagactagctcgcttgttgtttgccacaaacaagaaaaagatagcaccaaagttgcttgtagaaggcaccaaagttgccaatctcatgtcagcattaccagagaaggaatggatggatttgtggaatattcttagtgacccagaaggcacatatgttcctgttactgaaagcttgcttgaactagtgttgcgaaataggttgcaagagtggcttgttgaaatggtaatggaaggtcataagtctactggtcgcgatgatctaggacaaggagctatccatctgtgttctttcctaggttatacttgggctattcgattgttttctttgtcggggttctccttggatttccgtgattcttctggttggactgctttacactgggctgcataccacgggagggaaaggatggttgccactcttttatctgctggagcaaatccaagtttagttacagaccctactcccgaatcccctgctggactcactgctgctgatcttgcagcaagacaaggttacgatggcttggcagcatatcttgctgagaaaggattgactgcacattttgaggccatgtcactgtccaaggatactgagcaatcaccatcaaagactaggctaacaaaactacaaagcgagaagtttgagcaccttagtgaacaagaactttgcttaaaagaatctctagcagcctatcgcaatgctgctgatgctgccagtaatatccaagctgcactcagggagagaactcttaagcttcaaacaaaagcaattcaattggctaatcctgagattgaagcatctgagatagttgctgctatgaagattcaacatgcatttcggaactacaacagaaagaaagcaatgagagctgctgcacgaatacagagtcatttccgtacatggaagatgaggaggaacttcattaacatgcgaagacaagttatcaggatacaagctgcgtaccgaggtcatcaagtgagaaggcagtaccgcaaggtaatatggtctgttggaattgttgagaaagcaattttgcgatggagaaagaagagaaaaggccttcgtgggatcgcatctggaatgccagtagttatgactgtggatgccgaagcagaaccagcaagtactgcagaagaagacttcttccaggccggccggcaacaagccgaggacaggttcaatagatctgtggttcgcgttcaagccctgttccgttcttacaaggcacaacaggagtaccggaggatgaagattgctcatgaggaggccaagattgagttcagtgaagggcagctaggagcagcatgcaggagttga</cdnaseq>|
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| − | AA = <aaseq>MAGAGGWDPLVGSEIHGFLTYPDLNYEKLVAEAAARWFRPNEIY AILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKL KIGNEERVHVYYARGEDDPNFFRRCYWLLDKDLERIVLVHYRQTAEENAMAPPNPEPE VADVPTVNLIHYTSPLTSADSTSGHTELSLPEEINSHGGISASSETGNHDSSLEEFWA NLLESSIKNDPKVVTSACGGSFVSSQQINNGPKNSGNIVNTSMASNAIPALNVVSETY ATNHGLNQVNANHFGALKHQGDQTQSLLASDVDSQSDQFISSSVKSPMDGNTSIPNEV PARQNSLGLWKYLDDDSPGLGDNPSSVPQSFCPVTNERLLEINEISPEWAYSTETTKV VVIGNFYEQYKHLAGSAMFGVFGEQCVAGDIVQTGVYRFMVGPHTPGKVDFYLTLDGK TPISEICSFTYHVMHGSSLEARLPPSEDDYKRTNLKMQMRLARLLFATNKKKIAPKLL VEGTKVANLMSALPEKEWMDLWNILSDPEGTYVPVTESLLELVLRNRLQEWLVEMVME GHKSTGRDDLGQGAIHLCSFLGYTWAIRLFSLSGFSLDFRDSSGWTALHWAAYHGRER MVATLLSAGANPSLVTDPTPESPAGLTAADLAARQGYDGLAAYLAEKGLTAHFEAMSL SKDTEQSPSKTRLTKLQSEKFEHLSEQELCLKESLAAYRNAADAASNIQAALRERTLK LQTKAIQLANPEIEASEIVAAMKIQHAFRNYNRKKAMRAAARIQSHFRTWKMRRNFIN MRRQVIRIQAAYRGHQVRRQYRKVIWSVGIVEKAILRWRKKRKGLRGIASGMPVVMTV DAEAEPASTAEEDFFQAGRQQAEDRFNRSVVRVQALFRSYKAQQEYRRMKIAHEEAKI EFSEGQLGAACRS</aaseq>|
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| − | DNA = <dnaseqindica>12445..12489#11845..12162#11048..11603#9953..10644#8916..9296#8289..8371#8118..8213#7744..7912#6987..7032#6141..6229#5939..6054#753..878#50..116#gttgtcttcctctgcgagagcagcagcggcggaggcggaggcggcggccatggcgggagcgggcggatgggacccgctcgtcggctccgagatccacggtttcctcacttacccaggttgccgccgccccccatccccgaccgcggccttttctatttcctctcgttttgttttgtttttttggttgattgagttcggcgcggggggatttctatggttcttcgtggtggtttttgctcttttttttttgtctcgtgctgtcttttctcggcgtgtttggttcgtttggggtttgagacactggcgtttgatgttttctcctgctagctgctgtagtttcctgtttttttaggtgttactgttcacacatttcccccatgttgagctgctgctgtgctggataggtgtgtttctgcggataatccttgctgtttgtggttcggtagcttgattgaagtggccgattgcttgttttggtttcgtgttgcttgtgttgttggaatttggtcggatgcttcgtagtttgcggggtttttgacagttcaattcctttgtctatctgattcttcctgcttaaatttcgttccgttaagtttcagggatttgcggctagctcaaagcttggtgttttttttttctaagctttagtttggcctgatatttttaggacactgagtttatgccgcattcgctgttgaaagaaataaatcaattttgagctgacttcttgattggtgtatgtgtcgtggtagacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtatgtgttcatgcacccctttagaccctcatgtacctgccatggtcttttctttgatggtatgatgtgaactcaagggagcagagcataggggcacgttgattggtaaagtgttagagtgtaggaaggcagtcatttcttgatcttttggattggctgtcttgtgtgtgaaaaaaaaatgctgtcttgagtttagggcatcttggtccatcgcttaagaaataatgtgatggttgattttgcgatggtcttgcggtgttgagcacctgagcgtcccatcattcgcgttagatggatgaaagcatgttgagtattgaaatacatttacagtaggcataattgaatgaaattgctcttgttaagaaatatttgtgcaccaagagccgtattgttactattctgatcaaaataccatctctaggatcagattatggaatattggatgtagaaaaatttatatgctcccaacatcagttaggttaatattgctcaaaatgtaggtatccacttacgtattttctatatatcagttacctgaatttattatttgtcagcaacctcaccttgtacacaacattgcctaaaacttgctgacaactttaatagagctttaatgaaaatttttgtttggtttgattttatttatatgggaacatttttgttttattcttttgttgctggggattcatgaaactaaaattttgtgtttatgaacatcttttgttaccacgcatgcacaggaatttagtccttattcttatcctgtctatcttgagtattaaaatttcaaaatatcatctctatgatcataacagaatgtgcaatcatgcataacatgaatgcgtttctgtgtcttgaatgtaaactagttatcgtgcacgtgcaaagcacgttttagcaattcatatgcgaaagtacaacaataaaatgggacctttttcatgcagtgcactccatacgaattcttccggtaaaaattagagtttcatatcatagtatgatcgcaatttggatgatctttacaaaacatgcactttgtatcctagagtgacaacataagatgcagtgcaccagctgccttcattaacagaaattccaaagcttcgtatgaatgccccacaggacaactacatagaaacatgtgcatagatatctcatgaatccaaaaaaaaaaaaactttggagcatctctggctgagaaaataatttgaatcatgacactatatgatcactgtttctatgagattgctagaatcaccatctggtaaaacaagttcatcagctagcatctcatattctcattgatagaattgcattacagagaggaatacaatagcccatggttagcaatctcatggcggttgacctcaaacatatcaaaacctaagctaaagtgcaaaaggaaaagagaaaattaatatgatattctgccaccaagccacaccaatgtttgtaatatccatagcatgagaaatctttctccattctgtgtaaaataatgttcatttcaaacttgaagatccattactttcccaccagtattgttcctatcaaaacttaattgagatacatacgttgaaaaactatataatcatatccaaagtctaatgataatgaattaatgaatatataactatcgaagatcttttatgtctgaagtgagcaaatatattgaaaactgcattgaaagatgaacaagatgccatggaaggtaccgaagtatttcatgggacatgcagcttttataccaattttcatcatcacattttgtctcccttccatatctcgtccaagagaaacacaaaactgatcaatgtgtaaatttaactatcatcaatccctctccatagcctctccttggccttttaggcattgtgacaaacaacatcaataaagacatatacctactgatggccacatgaatgattattggatggccaatatctataagaaattctatgcaattacaggaacaacaataattgcatttaataatgagaaaaatattccctccataacgtttattgctgaagaatagtttgatatttcattttccaaaacactaagataatcattatatgtatggaactgtctatatgtgaattgtttatgatgcagtataatattattatattgaagctgcaacatagtgtttctaaattacctgtccttgttgacaatgttgacttgcaaagcctatcctattattcatcaccaagggaagtggccagcagcagcacattgggagaggaatgagattatatgtaattcttaaacaaaaaagaataatctgtcacctgtgtacatcaacaatgtaaattttgaaggtagcatcataacattagcatcacactgccatattgtcagaaatcaggatttctccttatttcagaggattaattgaaagcagaggaaccaaaaataagtgcattaaataaacaaaaggctgctcattaatctgatgagactctatcgttcctaatatacagacacaagattttgaattcagacttgaatctacaattcaactgtcagattgtatgaattggagatggggattccaaactcaccaacaaattcgtcacggcaacatcgagctgaatcaggtctcaacatgtcaccattcagctgaacaacaaaatacaaatagaggaccaatgggaaatcataattgacacatcgtttgccacaaaaaagcttgagcataagaaatagtgaatgattaaaaatgaaaaatgagagtcagctgccagcaacaaacgacatcgtcacgtaaaagcacttttaatacatacgctatagatagagtattatcacaggccaatataaattgtctgcaggtaaaataatggtagcaaacaaatcaaaatttagaaaagcaaaataatggacctgtcattgcagaattttgcggtgtagggcttagtacattacccattgaaattaatcagaatgcatggtgattgtgcactatcatatcatcgtagctcaataactccaagtctatttaattgaattaaaggcaaagtattagtgaactctaaaataaagtccacactctattggatgcaataaaattttgatgtttcttttagcatgaaaatatcagaagtacaattaattagaaacgtgtgacatagaaatactacctgtcattataatgctattctgttgattaatgtggaaaactatgcagttcttttgatttccatctgagctttggatttcaccacatgtgtcaccagagttcagtgcaataaaatttcttctactgcctaaaatcatacatcatgaattgttgtgagtactaaaagaagtagcagcatctaaaagtatagcaggttctttcctgcttgaactttcagttgcaccactatcatggccagagtctcccattgagtcagtagcagtagttttcacttcttaataatagtctgtatctagcgaagaaaaaaaactatataatagcaaaacagaaatatattgaacatatgtctgcactgcagattcctacaaatatgcatactgatcatgtctccttatccatcacacaaagcagcatcatcgtcgtgtctgagccatctgcagacatgaacagcaggtggaattagcgtcatgctaccatcgctggccccagtgccgcccttcttgctccacccatgcctagcacaaaggaacctccatacacacacacccggcacatacggacttttgcaaacctctgcatccacctacatacagacatacagctccaagcacatatacatctgtgacaaacaacacactgttttttattttcattataaaaagtcatggttcttgatccatctccaccaatgcttctcctaatcagaaaaaggtaacaccaataaaagatttgatcgatctccaccatatgcacaaatctaacaacacaaatcatcccaggggtgacagcaaaagaagggttgtgtgttctttttg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| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066207.1 RefSeq:Os07g0490200]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 7]]
| |
| − | [[Category:Chromosome 7]]
| |
