Difference between revisions of "Os07g0684900"

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(Created page with "{{JaponicaGene| GeneName = Os07g0684900| Description = Homeodomain-like containing protein| Version = NM_001067207.1 GI:115474146 GeneID:4344325| Length = 2603 bp| Defini...")
 
 
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{{JaponicaGene|
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The rice gene Os07g0684900 was reported as '''''OsWOX11''''' in 2009<ref name="ref1" /> by researchers from China and France.
GeneName = Os07g0684900|
 
Description = Homeodomain-like containing protein|
 
Version = NM_001067207.1 GI:115474146 GeneID:4344325|
 
Length = 2603 bp|
 
Definition = Oryza sativa Japonica Group Os07g0684900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os07g0684900 <=> OsWOX11, Os WOX11, OsWOX12A
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Function===
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
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* '''''WOX11''''' is involved in the activation of crown root emergence and growth.
AP = Chromosome 7:29733211..29735813|
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* '''''WOX11''''' may be an integrator of auxin and cytokinin signaling that feeds into RR2 to regulate cell proliferation during crown root development.
CDS = 29733315..29733909,29734945..29735120,29735312..29735329|
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===Mutation===
GCID = <gbrowseImage1>
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* Loss-of-function mutation or downregulation of '''''WOX11''''' reduced the number and the growth rate of crown roots, whereas overexpression of the gene induced precocious crown root growth and dramatically increased the root biomass by producing crown roots at the upper stem nodes and the base of florets.
name=NC_008400:29733211..29735813
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source=RiceChromosome07
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* The expressions of auxin- and cytokinin-responsive genes were affected in '''''WOX11''''' overexpression and RNA interference transgenic plants.
preset=GeneLocation
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</gbrowseImage1>|
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===Expression ===
GSID = <gbrowseImage2>
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* '''''WOX11''''' was found to be expressed in emerging crown roots and later in cell division regions of the root meristem. The expression could be induced by exogenous auxin or cytokinin.
name=NC_008400:29733211..29735813
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source=RiceChromosome07
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===Evolution===
preset=GeneLocation
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</gbrowseImage2>|
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You can also add sub-section(s) at will.
CDNA = <cdnaseq>atggacggcggccacagcccggacaggcatgcggcggcggcggcgggggagccggtgaggtcgcggtggacgccgaagccggagcagatactcatcctggagtccatcttcaacagcggcatggtgaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctgcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcacgaggtcgtcttga</cdnaseq>|
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==Labs working on this gene==
AA = <aaseq>MDGGHSPDRHAAAAAGEPVRSRWTPKPEQILILESIFNSGMVNP                    PKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPP                    TASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGD                    DLFAISRQMGYMDGGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPID                    LRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTRSS</aaseq>|
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* National Key Laboratory for Crop Genetic Improvement, Huazhong Agricultural University, 430070 Wuhan, China
DNA = <dnaseqindica>105..699#1735..1910#2102..2119#aagcgaattaagcacacatcaattgaccaaacctatctctctatctctctcgagctagcgagctctaggtgttcgacaccgaacaaggcagctagctagtggcgatggacggcggccacagcccggacaggcatgcggcggcggcggcgggggagccggtgaggtcgcggtggacgccgaagccggagcagatactcatcctggagtccatcttcaacagcggcatggtgaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctggtgagcccttcatacatgatgcatgtccccccaatttccattcgtcggtgctttgattaatttgcctttaatttctctctaactaaacatgcacatatatagctagtttttagcatatatatacatgtttaattacgcatgcagatgcagtgatgaggggaattagttgttccgtttggtgctaataattcttgctctcctagtacaaattcagagaaagaaaattcctttcagtctctctttgcttcgatcgatctcttctagagtattaagggacatgtacatacgatcatattactgcatatatacacttgatcgatcgtttcatcttccagaaactcatattttgtcttccttaattttaatttgtccttattttgatcttccgcgttgaatgtctttgagactttgcacttgtatttttgcggtaattgagattgggaacgatcaattacgcagtactagctagtgtactacactgaaataagagaattaagggcaaagctttgtcttgttcttttatcttagtagtagcaaatatgcttcatgcatgcatactaaataaactaatactgccaatttatccatgcatgcatatataatcgtactacattatatgcatatggagtatatataatgcaattaatactagtagttgaattgttgcatgcgtgaatggcgcaatacaatatatgtacttaattatgcagatgcatgcatgtttttgtcatggatttgtagatatgcatgagtatacatataatttagacatagggctgatactagctaggacactgaatttctaaccaccggccagccgatcaatggtagtactacttattattggttaatcatcaagtaaagccacctattgatcgatcgatcatatatatgtacactgtatatatcactccagttgtagtaggagtagtacttttgcaataattgagaagtagtccttgtccgaagtgacattagatatgtaggtaatgtgaattgggaaagaaaaatgatggatgaatatgatatgtgcagcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcagtctcagccctgatcgatcgctagctagctccaactcctctaattcgattctgtcatcacaatgcacgtcactaagctaactagctatataccctgtcaattaattacttacttacagaacaattaattaatcgatctatagtcaattaattaacaaggcgttgcatcatctatgtatatatgacaggtcacgaggtcgtcttgatcgagttgagcgattcgtcgattgattgatcgatggcaacgtacgtattgtgtcagcaagatttaggtaccccttgtccgttggatcagatcgatatgcaagcaacgcatgctttgcaggtgccggccggttaattacgcgatcgatcgagctagcagatgatgaatgctgcacgtacgcatggcaattgtcactgcgacgagcctgcatatatatgaacgatccattgatcgtcattctagcgaccaagcagcacgatagtacaagtatatactatacaatgcaattgcagcgacgaactagttaattataatacagataatgcatgtgtacttctgtggccatacatatatatatagagagagaggggattaattactatattcgtttttcatctagctggtcgatctctgtgtgtacttgtatgtatcccgttctcgatctttatatcagaatattttatatatgtatattttacaattat</dnaseqindica>|
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* Institut de Biotechnologie des Plantes, Universite′ Paris Sud 11, 91405 Orsay, France
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067207.1 RefSeq:Os07g0684900]|
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==References==
}}
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<references>
[[Category:Genes]]
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* <ref name="ref1">
[[Category:Japonica mRNA]]
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Zhao Y, Hu Y, Dai M, Huang L, Zhou DX. The WUSCHEL-related homeobox gene WOX11
[[Category:Oryza Sativa Japonica Group]]
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is required to activate shoot-borne crown root development in rice. Plant Cell.
[[Category:Japonica Genes]]
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2009 Mar;21(3):736-48. doi: 10.1105/tpc.108.061655. PubMed PMID: 19258439; PubMed
[[Category:Japonica Chromosome 7]]
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Central PMCID: PMC2671696.
[[Category:Chromosome 7]]
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 +
</ref>
 +
</references>
 +
 
 +
 
 +
==Structured Information==
 +
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]

Latest revision as of 06:49, 11 December 2016

The rice gene Os07g0684900 was reported as OsWOX11 in 2009[1] by researchers from China and France.

Annotated Information

Gene Symbol

  • Os07g0684900 <=> OsWOX11, Os WOX11, OsWOX12A

Function

  • WOX11 is involved in the activation of crown root emergence and growth.
  • WOX11 may be an integrator of auxin and cytokinin signaling that feeds into RR2 to regulate cell proliferation during crown root development.

Mutation

  • Loss-of-function mutation or downregulation of WOX11 reduced the number and the growth rate of crown roots, whereas overexpression of the gene induced precocious crown root growth and dramatically increased the root biomass by producing crown roots at the upper stem nodes and the base of florets.
  • The expressions of auxin- and cytokinin-responsive genes were affected in WOX11 overexpression and RNA interference transgenic plants.

Expression

  • WOX11 was found to be expressed in emerging crown roots and later in cell division regions of the root meristem. The expression could be induced by exogenous auxin or cytokinin.

Evolution

You can also add sub-section(s) at will.

Labs working on this gene

  • National Key Laboratory for Crop Genetic Improvement, Huazhong Agricultural University, 430070 Wuhan, China
  • Institut de Biotechnologie des Plantes, Universite′ Paris Sud 11, 91405 Orsay, France

References

  1. Zhao Y, Hu Y, Dai M, Huang L, Zhou DX. The WUSCHEL-related homeobox gene WOX11 is required to activate shoot-borne crown root development in rice. Plant Cell. 2009 Mar;21(3):736-48. doi: 10.1105/tpc.108.061655. PubMed PMID: 19258439; PubMed Central PMCID: PMC2671696.


Structured Information